RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.03	□□□□□ -0.32
ATG7-223	ENST00000478638	ASXL1	Q8IXJ9	1541 aa		13.03	□□□□□ -0.32
ATG7-223	ENST00000478638	PNISR	Q8TF01	805 aa	Known RBP	13.02	□□□□□ -0.33
ATG7-223	ENST00000478638	QRICH2	Q9H0J4	1663 aa		13.02	□□□□□ -0.33
ATG7-223	ENST00000478638	C14orf37	Q86TY3	774 aa		13.01	□□□□□ -0.33
ATG7-223	ENST00000478638	PUS7	Q96PZ0	661 aa	Known RBP	13.01	□□□□□ -0.33
ATG7-223	ENST00000478638	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13	□□□□□ -0.33
ATG7-223	ENST00000478638	NLRP13	Q86W25	1043 aa		12.99	□□□□□ -0.33
ATG7-223	ENST00000478638	RBM33	Q96EV2	1170 aa	Known RBP	12.99	□□□□□ -0.33
ATG7-223	ENST00000478638	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.99	□□□□□ -0.33
ATG7-223	ENST00000478638	USP32	Q8NFA0	1604 aa		12.99	□□□□□ -0.33
ATG7-223	ENST00000478638	DIP2A	Q14689	1571 aa		12.98	□□□□□ -0.33
ATG7-223	ENST00000478638	PTPRU	Q92729	1446 aa		12.98	□□□□□ -0.33
ATG7-223	ENST00000478638	PANK3	Q9H999	370 aa		12.98	□□□□□ -0.33
ATG7-223	ENST00000478638	SETD1A	O15047	1707 aa	Known RBP	12.98	□□□□□ -0.33
ATG7-223	ENST00000478638	ALK	Q9UM73	1620 aa		12.98	□□□□□ -0.33
ATG7-223	ENST00000478638	TMEM94	Q12767	1356 aa		12.97	□□□□□ -0.33
ATG7-223	ENST00000478638	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.97	□□□□□ -0.33
ATG7-223	ENST00000478638	POLR3GL	Q9BT43	218 aa		12.97	□□□□□ -0.33
ATG7-223	ENST00000478638	TRAK1	Q9UPV9	953 aa		12.97	□□□□□ -0.33
ATG7-223	ENST00000478638	CPS1	P31327	1500 aa		12.97	□□□□□ -0.33
ATG7-223	ENST00000478638	ABCC11	Q96J66	1382 aa		12.96	□□□□□ -0.33
ATG7-223	ENST00000478638	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.96	□□□□□ -0.33
ATG7-223	ENST00000478638	POGK	Q9P215	609 aa		12.96	□□□□□ -0.33
ATG7-223	ENST00000478638	WAPL	Q7Z5K2	1190 aa		12.95	□□□□□ -0.34
ATG7-223	ENST00000478638	SIRT1	Q96EB6	747 aa		12.95	□□□□□ -0.34
ATG7-223	ENST00000478638	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.95	□□□□□ -0.34
ATG7-223	ENST00000478638	LTBP4	Q8N2S1	1624 aa		12.95	□□□□□ -0.34
ATG7-223	ENST00000478638	DLC1	Q96QB1	1528 aa		12.94	□□□□□ -0.34
ATG7-223	ENST00000478638	TULP4	Q9NRJ4	1543 aa		12.94	□□□□□ -0.34
ATG7-223	ENST00000478638	UBAP1L	F5GYI3	381 aa		12.94	□□□□□ -0.34
ATG7-223	ENST00000478638	C19orf44	Q9H6X5	657 aa		12.94	□□□□□ -0.34
ATG7-223	ENST00000478638	BLM	P54132	1417 aa	Predicted RBP	12.94	□□□□□ -0.34
ATG7-223	ENST00000478638	SMG6	Q86US8	1419 aa	Known RBP	12.94	□□□□□ -0.34
ATG7-223	ENST00000478638	ROBO2	Q9HCK4	1378 aa		12.94	□□□□□ -0.34
ATG7-223	ENST00000478638	LRRC7	Q96NW7	1537 aa		12.93	□□□□□ -0.34
ATG7-223	ENST00000478638	NKTR	P30414	1462 aa	Known RBP	12.93	□□□□□ -0.34
ATG7-223	ENST00000478638	TOM1	O60784	492 aa		12.93	□□□□□ -0.34
ATG7-223	ENST00000478638	ATF3	P18847	181 aa		12.93	□□□□□ -0.34
ATG7-223	ENST00000478638	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.93	□□□□□ -0.34
ATG7-223	ENST00000478638	FAM9B	Q8IZU0	186 aa		12.93	□□□□□ -0.34
ATG7-223	ENST00000478638	TMC1	Q8TDI8	760 aa		12.93	□□□□□ -0.34
ATG7-223	ENST00000478638	PRAM1	Q96QH2	718 aa		12.93	□□□□□ -0.34
ATG7-223	ENST00000478638	NRXN3	Q9Y4C0	1643 aa		12.92	□□□□□ -0.34
ATG7-223	ENST00000478638	NCOA3	Q9Y6Q9	1424 aa		12.92	□□□□□ -0.34
ATG7-223	ENST00000478638	MSH6	P52701	1360 aa		12.92	□□□□□ -0.34
ATG7-223	ENST00000478638	ERICH6B	Q5W0A0	696 aa		12.9	□□□□□ -0.34
ATG7-223	ENST00000478638	CADPS2	Q86UW7	1296 aa		12.9	□□□□□ -0.34
ATG7-223	ENST00000478638	KNDC1	Q76NI1	1749 aa		12.9	□□□□□ -0.34
ATG7-223	ENST00000478638	PTCH1	Q13635	1447 aa		12.89	□□□□□ -0.35
ATG7-223	ENST00000478638	PIP4K2B	P78356	416 aa		12.89	□□□□□ -0.35
ATG7-223	ENST00000478638	KNSTRN	Q9Y448	316 aa		12.89	□□□□□ -0.35
ATG7-223	ENST00000478638	NINL	Q9Y2I6	1382 aa		12.89	□□□□□ -0.35
ATG7-223	ENST00000478638	RNF123	Q5XPI4	1314 aa		12.88	□□□□□ -0.35
ATG7-223	ENST00000478638	FAM135B	Q49AJ0	1406 aa		12.88	□□□□□ -0.35
ATG7-223	ENST00000478638	FBXO41	Q8TF61	875 aa		12.88	□□□□□ -0.35
ATG7-223	ENST00000478638	IQSEC2	Q5JU85	1478 aa		12.88	□□□□□ -0.35
ATG7-223	ENST00000478638	NWD1	Q149M9	1564 aa		12.88	□□□□□ -0.35
ATG7-223	ENST00000478638	TECPR2	O15040	1411 aa		12.88	□□□□□ -0.35
ATG7-223	ENST00000478638	PLEKHH1	Q9ULM0	1364 aa		12.87	□□□□□ -0.35
ATG7-223	ENST00000478638	SLAIN2	Q9P270	581 aa		12.87	□□□□□ -0.35
ATG7-223	ENST00000478638	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.87	□□□□□ -0.35
ATG7-223	ENST00000478638	PPP2R1A	P30153	589 aa		12.86	□□□□□ -0.35
ATG7-223	ENST00000478638	CARD14	Q9BXL6	1004 aa		12.86	□□□□□ -0.35
ATG7-223	ENST00000478638	CHD2	O14647	1828 aa	Known RBP	12.85	□□□□□ -0.35
ATG7-223	ENST00000478638	CC2D1B	Q5T0F9	858 aa	Known RBP	12.84	□□□□□ -0.35
ATG7-223	ENST00000478638	NUDC	Q9Y266	331 aa		12.84	□□□□□ -0.35
ATG7-223	ENST00000478638	ADGRL3	Q9HAR2	1447 aa		12.84	□□□□□ -0.35
ATG7-223	ENST00000478638	EVC2	Q86UK5	1308 aa		12.84	□□□□□ -0.35
ATG7-223	ENST00000478638	STRCP1	A6NGW2	1772 aa		12.84	□□□□□ -0.35
ATG7-223	ENST00000478638	NSD2	O96028	1365 aa		12.83	□□□□□ -0.36
ATG7-223	ENST00000478638	ANKRD36B	Q8N2N9	1353 aa		12.83	□□□□□ -0.36
ATG7-223	ENST00000478638	NUTM2F	A1L443	756 aa		12.83	□□□□□ -0.36
ATG7-223	ENST00000478638	NEFL	P07196	543 aa		12.83	□□□□□ -0.36
ATG7-223	ENST00000478638	PDE3B	Q13370	1112 aa		12.83	□□□□□ -0.36
ATG7-223	ENST00000478638	XRN1	Q8IZH2	1706 aa	Known RBP	12.82	□□□□□ -0.36
ATG7-223	ENST00000478638	ANKRD26	Q9UPS8	1709 aa		12.82	□□□□□ -0.36
ATG7-223	ENST00000478638	WASL	O00401	505 aa	Predicted RBP	12.82	□□□□□ -0.36
ATG7-223	ENST00000478638	FKBP8	Q14318	412 aa		12.82	□□□□□ -0.36
ATG7-223	ENST00000478638	POLR3A	O14802	1390 aa	Predicted RBP	12.81	□□□□□ -0.36
ATG7-223	ENST00000478638	NSD3	Q9BZ95	1437 aa		12.81	□□□□□ -0.36
ATG7-223	ENST00000478638	CDK19	Q9BWU1	502 aa		12.81	□□□□□ -0.36
ATG7-223	ENST00000478638	ATAD2	Q6PL18	1390 aa		12.81	□□□□□ -0.36
ATG7-223	ENST00000478638	DCC	P43146	1447 aa		12.8	□□□□□ -0.36
ATG7-223	ENST00000478638	CD163L1	Q9NR16	1453 aa		12.8	□□□□□ -0.36
ATG7-223	ENST00000478638	ESCO1	Q5FWF5	840 aa		12.8	□□□□□ -0.36
ATG7-223	ENST00000478638	SHPRH	Q149N8	1683 aa		12.8	□□□□□ -0.36
ATG7-223	ENST00000478638	SRPK2	P78362	688 aa	Known RBP	12.79	□□□□□ -0.36
ATG7-223	ENST00000478638	ORAI2	Q96SN7	254 aa		12.78	□□□□□ -0.36
ATG7-223	ENST00000478638	ADGRB2	O60241	1585 aa		12.77	□□□□□ -0.36
ATG7-223	ENST00000478638	BRINP3	Q76B58	766 aa		12.77	□□□□□ -0.37
ATG7-223	ENST00000478638	ILDR1	Q86SU0	546 aa	Predicted RBP	12.77	□□□□□ -0.37
ATG7-223	ENST00000478638	SLC12A5	Q9H2X9	1139 aa		12.77	□□□□□ -0.37
ATG7-223	ENST00000478638	ZNF521	Q96K83	1311 aa		12.77	□□□□□ -0.37
ATG7-223	ENST00000478638	NGEF	Q8N5V2	710 aa		12.76	□□□□□ -0.37
ATG7-223	ENST00000478638	NUDT16	Q96DE0	195 aa	Known RBP	12.76	□□□□□ -0.37
ATG7-223	ENST00000478638	CABP2	Q9NPB3	220 aa		12.76	□□□□□ -0.37
ATG7-223	ENST00000478638	ATP7B	P35670	1465 aa		12.76	□□□□□ -0.37
ATG7-223	ENST00000478638	MST1R	Q04912	1400 aa		12.75	□□□□□ -0.37
ATG7-223	ENST00000478638	CGNL1	Q0VF96	1302 aa		12.75	□□□□□ -0.37

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