RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 AMOTL2Q9Y2J4 779 aa16.76■□□□□ 0.27
PDCD11-204ENST00000478543 DCCP43146 1447 aa16.76■□□□□ 0.27
PDCD11-204ENST00000478543 IFT172Q9UG01 1749 aa16.74■□□□□ 0.27
PDCD11-204ENST00000478543 NEXMIFQ5QGS0 1516 aa16.73■□□□□ 0.27
PDCD11-204ENST00000478543 PPLO60437 1756 aa16.73■□□□□ 0.27
PDCD11-204ENST00000478543 NALCNQ8IZF0 1738 aa16.73■□□□□ 0.27
PDCD11-204ENST00000478543 ADAMTS2O95450 1211 aa16.71■□□□□ 0.27
PDCD11-204ENST00000478543 LRRC59Q96AG4 307 aaKnown RBP16.71■□□□□ 0.27
PDCD11-204ENST00000478543 ATAD2Q6PL18 1390 aa16.71■□□□□ 0.27
PDCD11-204ENST00000478543 RPGRIP1LQ68CZ1 1315 aa16.7■□□□□ 0.26
PDCD11-204ENST00000478543 NBPF8Q3BBV2 869 aa16.7■□□□□ 0.26
PDCD11-204ENST00000478543 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDCD11-204ENST00000478543 MYOM2P54296 1465 aa16.69■□□□□ 0.26
PDCD11-204ENST00000478543 HDGFP51858 240 aaKnown RBP16.69■□□□□ 0.26
PDCD11-204ENST00000478543 LAMC1P11047 1609 aa16.69■□□□□ 0.26
PDCD11-204ENST00000478543 METP08581 1390 aa16.68■□□□□ 0.26
PDCD11-204ENST00000478543 PRAG1Q86YV5 1406 aa16.68■□□□□ 0.26
PDCD11-204ENST00000478543 ADGRF5Q8IZF2 1346 aa16.68■□□□□ 0.26
PDCD11-204ENST00000478543 NGLY1Q96IV0 654 aa16.67■□□□□ 0.26
PDCD11-204ENST00000478543 ZRANB1Q9UGI0 708 aa16.67■□□□□ 0.26
PDCD11-204ENST00000478543 ATRNO75882 1429 aa16.66■□□□□ 0.26
PDCD11-204ENST00000478543 ADGRL3Q9HAR2 1447 aa16.66■□□□□ 0.26
PDCD11-204ENST00000478543 VGFO15240 615 aaPredicted RBP16.65■□□□□ 0.26
PDCD11-204ENST00000478543 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
PDCD11-204ENST00000478543 USP21Q9UK80 565 aa16.64■□□□□ 0.25
PDCD11-204ENST00000478543 NRXN1Q9ULB1 1477 aa16.64■□□□□ 0.25
PDCD11-204ENST00000478543 C1orf167Q5SNV9 1468 aa16.63■□□□□ 0.25
PDCD11-204ENST00000478543 FNBP4Q8N3X1 1017 aaPredicted RBP16.63■□□□□ 0.25
PDCD11-204ENST00000478543 TRPM1Q7Z4N2 1603 aa16.63■□□□□ 0.25
PDCD11-204ENST00000478543 COL22A1Q8NFW1 1626 aaPredicted RBP16.62■□□□□ 0.25
PDCD11-204ENST00000478543 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
PDCD11-204ENST00000478543 BCL9LQ86UU0 1499 aa16.61■□□□□ 0.25
PDCD11-204ENST00000478543 RALGAPBQ86X10 1494 aa16.61■□□□□ 0.25
PDCD11-204ENST00000478543 TRPC5Q9UL62 973 aaPredicted RBP16.61■□□□□ 0.25
PDCD11-204ENST00000478543 SOS2Q07890 1332 aaPredicted RBP16.61■□□□□ 0.25
PDCD11-204ENST00000478543 ORAI2Q96SN7 254 aa16.6■□□□□ 0.25
PDCD11-204ENST00000478543 CFAP70Q5T0N1 1121 aa16.59■□□□□ 0.25
PDCD11-204ENST00000478543 PTCH1Q13635 1447 aa16.59■□□□□ 0.25
PDCD11-204ENST00000478543 NBPF1Q3BBV0 1214 aa16.58■□□□□ 0.24
PDCD11-204ENST00000478543 ROCK2O75116 1388 aaKnown RBP16.58■□□□□ 0.24
PDCD11-204ENST00000478543 KIAA1210Q9ULL0 1709 aa16.57■□□□□ 0.24
PDCD11-204ENST00000478543 MARF1Q9Y4F3 1742 aaKnown RBP16.57■□□□□ 0.24
PDCD11-204ENST00000478543 GLI3P10071 1580 aa16.56■□□□□ 0.24
PDCD11-204ENST00000478543 LRP5O75197 1615 aa16.56■□□□□ 0.24
PDCD11-204ENST00000478543 CARD11Q9BXL7 1154 aa16.55■□□□□ 0.24
PDCD11-204ENST00000478543 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
PDCD11-204ENST00000478543 BRWD3Q6RI45 1802 aa16.54■□□□□ 0.24
PDCD11-204ENST00000478543 DEFB132Q7Z7B7 95 aa16.54■□□□□ 0.24
PDCD11-204ENST00000478543 ROBO2Q9HCK4 1378 aa16.53■□□□□ 0.24
PDCD11-204ENST00000478543 TMEM132EQ6IEE7 984 aa16.52■□□□□ 0.24
PDCD11-204ENST00000478543 CCDC125Q86Z20 511 aa16.52■□□□□ 0.24
PDCD11-204ENST00000478543 PXDNQ92626 1479 aa16.52■□□□□ 0.23
PDCD11-204ENST00000478543 GPRASP1Q5JY77 1395 aa16.51■□□□□ 0.23
PDCD11-204ENST00000478543 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.51■□□□□ 0.23
PDCD11-204ENST00000478543 BLMP54132 1417 aaPredicted RBP16.51■□□□□ 0.23
PDCD11-204ENST00000478543 ADGRB1O14514 1584 aa16.51■□□□□ 0.23
PDCD11-204ENST00000478543 GJD4Q96KN9 370 aaPredicted RBP16.5■□□□□ 0.23
PDCD11-204ENST00000478543 USP47Q96K76 1375 aa16.49■□□□□ 0.23
PDCD11-204ENST00000478543 HSPA5P11021 654 aaKnown RBP16.48■□□□□ 0.23
PDCD11-204ENST00000478543 HIRIP3Q9BW71 556 aaPredicted RBP16.48■□□□□ 0.23
PDCD11-204ENST00000478543 SLIT2O94813 1529 aa16.47■□□□□ 0.23
PDCD11-204ENST00000478543 EIF4G2P78344 907 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDCD11-204ENST00000478543 XPCQ01831 940 aaPredicted RBP16.47■□□□□ 0.23
PDCD11-204ENST00000478543 STK26Q9P289 416 aa16.46■□□□□ 0.23
PDCD11-204ENST00000478543 YTHDC2Q9H6S0 1430 aaKnown RBP16.45■□□□□ 0.22
PDCD11-204ENST00000478543 TRAK1Q9UPV9 953 aa16.45■□□□□ 0.22
PDCD11-204ENST00000478543 PSDA5PKW4 1024 aaPredicted RBP16.43■□□□□ 0.22
PDCD11-204ENST00000478543 LRPPRCP42704 1394 aaKnown RBP16.42■□□□□ 0.22
PDCD11-204ENST00000478543 CDC42BPGQ6DT37 1551 aa16.42■□□□□ 0.22
PDCD11-204ENST00000478543 ARHGEF28Q8N1W1 1705 aaKnown RBP16.42■□□□□ 0.22
PDCD11-204ENST00000478543 EIF3AQ14152 1382 aaKnown RBP16.41■□□□□ 0.22
PDCD11-204ENST00000478543 ST20-MTHFSA0A0A6YYL1 179 aa16.41■□□□□ 0.22
PDCD11-204ENST00000478543 UNC5CLQ8IV45 518 aa16.41■□□□□ 0.22
PDCD11-204ENST00000478543 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
PDCD11-204ENST00000478543 FOXO3O43524 673 aa16.4■□□□□ 0.22
PDCD11-204ENST00000478543 NPHP3Q7Z494 1330 aa16.4■□□□□ 0.22
PDCD11-204ENST00000478543 KNDC1Q76NI1 1749 aa16.39■□□□□ 0.21
PDCD11-204ENST00000478543 ZNF316A6NFI3 1004 aaPredicted RBP16.39■□□□□ 0.21
PDCD11-204ENST00000478543 ESCO1Q5FWF5 840 aa16.39■□□□□ 0.21
PDCD11-204ENST00000478543 SEPT12Q8IYM1 358 aa16.38■□□□□ 0.21
PDCD11-204ENST00000478543 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
PDCD11-204ENST00000478543 PLCH1Q4KWH8 1693 aa16.37■□□□□ 0.21
PDCD11-204ENST00000478543 DLC1Q96QB1 1528 aa16.37■□□□□ 0.21
PDCD11-204ENST00000478543 SAFB2Q14151 953 aaKnown RBP eCLIP16.37■□□□□ 0.21
PDCD11-204ENST00000478543 CENPJQ9HC77 1338 aaPredicted RBP16.37■□□□□ 0.21
PDCD11-204ENST00000478543 QRICH2Q9H0J4 1663 aa16.37■□□□□ 0.21
PDCD11-204ENST00000478543 NUTM2FA1L443 756 aa16.36■□□□□ 0.21
PDCD11-204ENST00000478543 PRAM1Q96QH2 718 aa16.36■□□□□ 0.21
PDCD11-204ENST00000478543 POGKQ9P215 609 aa16.36■□□□□ 0.21
PDCD11-204ENST00000478543 TECPR2O15040 1411 aa16.36■□□□□ 0.21
PDCD11-204ENST00000478543 ABCA3Q99758 1704 aa16.35■□□□□ 0.21
PDCD11-204ENST00000478543 PLEKHH1Q9ULM0 1364 aa16.35■□□□□ 0.21
PDCD11-204ENST00000478543 WAPLQ7Z5K2 1190 aa16.34■□□□□ 0.21
PDCD11-204ENST00000478543 SPATA31A3Q5VYP0 1347 aa16.34■□□□□ 0.21
PDCD11-204ENST00000478543 ONECUT3O60422 494 aaPredicted RBP16.33■□□□□ 0.2
PDCD11-204ENST00000478543 TESK2Q96S53 571 aa16.33■□□□□ 0.2
PDCD11-204ENST00000478543 NWD2Q9ULI1 1742 aa16.32■□□□□ 0.2
PDCD11-204ENST00000478543 FMN2Q9NZ56 1722 aa16.31■□□□□ 0.2
PDCD11-204ENST00000478543 MINK1Q8N4C8 1332 aaPredicted RBP16.31■□□□□ 0.2
PDCD11-204ENST00000478543 SF3B2Q13435 895 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms