RNA–Protein interactions for RNA: ENST00000476941.5

TRPC1-203, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPC1, Length 3,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-203ENST00000476941 RAPGEF3O95398 923 aa24.43■■□□□ 1.5
TRPC1-203ENST00000476941 XRCC6P12956 609 aaKnown RBP eCLIP24.43■■□□□ 1.5
TRPC1-203ENST00000476941 COG6Q9Y2V7 657 aa24.43■■□□□ 1.5
TRPC1-203ENST00000476941 NSD3Q9BZ95 1437 aa24.42■■□□□ 1.5
TRPC1-203ENST00000476941 GOLGA6L3A6NEY3 463 aa24.42■■□□□ 1.5
TRPC1-203ENST00000476941 SEC24BO95487 1268 aa24.41■■□□□ 1.5
TRPC1-203ENST00000476941 RRP9O43818 475 aaKnown RBP24.4■■□□□ 1.5
TRPC1-203ENST00000476941 WWC1Q8IX03 1113 aa24.4■■□□□ 1.5
TRPC1-203ENST00000476941 CLCN1P35523 988 aa24.39■■□□□ 1.5
TRPC1-203ENST00000476941 PANK2Q9BZ23 570 aa24.39■■□□□ 1.5
TRPC1-203ENST00000476941 GZF1Q9H116 711 aaPredicted RBP24.39■■□□□ 1.5
TRPC1-203ENST00000476941 MTHFSP49914 203 aa24.39■■□□□ 1.49
TRPC1-203ENST00000476941 KDM5AP29375 1690 aaKnown RBP24.38■■□□□ 1.49
TRPC1-203ENST00000476941 CABP2Q9NPB3 220 aa24.37■■□□□ 1.49
TRPC1-203ENST00000476941 ABCA6Q8N139 1617 aa24.37■■□□□ 1.49
TRPC1-203ENST00000476941 TCP11L2Q8N4U5 519 aa24.37■■□□□ 1.49
TRPC1-203ENST00000476941 CLUAP1Q96AJ1 413 aa24.36■■□□□ 1.49
TRPC1-203ENST00000476941 NKTRP30414 1462 aaKnown RBP24.36■■□□□ 1.49
TRPC1-203ENST00000476941 NPC1L1Q9UHC9 1359 aa24.36■■□□□ 1.49
TRPC1-203ENST00000476941 TRMT2AQ8IZ69 625 aaKnown RBP24.36■■□□□ 1.49
TRPC1-203ENST00000476941 MYOM1P52179 1685 aa24.36■■□□□ 1.49
TRPC1-203ENST00000476941 INO80Q9ULG1 1556 aaPredicted RBP24.36■■□□□ 1.49
TRPC1-203ENST00000476941 IGHDP01880 384 aa24.36■■□□□ 1.49
TRPC1-203ENST00000476941 DEPDC5O75140 1603 aa24.35■■□□□ 1.49
TRPC1-203ENST00000476941 MAP3K4Q9Y6R4 1608 aa24.35■■□□□ 1.49
TRPC1-203ENST00000476941 TNNQ9UQP3 1299 aa24.34■■□□□ 1.49
TRPC1-203ENST00000476941 C14orf93Q9H972 538 aaKnown RBP24.34■■□□□ 1.49
TRPC1-203ENST00000476941 ANTXR1Q9H6X2 564 aa24.33■■□□□ 1.49
TRPC1-203ENST00000476941 U2AF1L5P0DN76 240 aaPredicted RBP24.33■■□□□ 1.49
TRPC1-203ENST00000476941 U2AF1Q01081 240 aaKnown RBP eCLIP24.33■■□□□ 1.49
TRPC1-203ENST00000476941 ARAP3Q8WWN8 1544 aa24.33■■□□□ 1.49
TRPC1-203ENST00000476941 ABCA9Q8IUA7 1624 aa24.32■■□□□ 1.48
TRPC1-203ENST00000476941 NPATQ14207 1427 aa24.31■■□□□ 1.48
TRPC1-203ENST00000476941 MROH1Q8NDA8 1641 aa24.31■■□□□ 1.48
TRPC1-203ENST00000476941 VWDEQ8N2E2 1590 aa24.3■■□□□ 1.48
TRPC1-203ENST00000476941 CD109Q6YHK3 1445 aa24.3■■□□□ 1.48
TRPC1-203ENST00000476941 SPRYD3Q8NCJ5 442 aa24.3■■□□□ 1.48
TRPC1-203ENST00000476941 FSD2A1L4K1 749 aa24.3■■□□□ 1.48
TRPC1-203ENST00000476941 EFCAB6Q5THR3 1501 aa24.29■■□□□ 1.48
TRPC1-203ENST00000476941 SRPK2P78362 688 aaKnown RBP24.29■■□□□ 1.48
TRPC1-203ENST00000476941 RUNDC1Q96C34 613 aa24.29■■□□□ 1.48
TRPC1-203ENST00000476941 MYOM2P54296 1465 aa24.29■■□□□ 1.48
TRPC1-203ENST00000476941 KIF1BO60333 1816 aa24.29■■□□□ 1.48
TRPC1-203ENST00000476941 U2SURPO15042 1029 aaKnown RBP24.29■■□□□ 1.48
TRPC1-203ENST00000476941 PPRC1Q5VV67 1664 aaKnown RBP24.28■■□□□ 1.48
TRPC1-203ENST00000476941 MROH2AA6NES4 1674 aa24.28■■□□□ 1.48
TRPC1-203ENST00000476941 CFAP53Q96M91 514 aa24.28■■□□□ 1.48
TRPC1-203ENST00000476941 ZNF518AQ6AHZ1 1483 aa24.28■■□□□ 1.48
TRPC1-203ENST00000476941 CGNL1Q0VF96 1302 aa24.27■■□□□ 1.48
TRPC1-203ENST00000476941 UPF2Q9HAU5 1272 aaKnown RBP24.27■■□□□ 1.48
TRPC1-203ENST00000476941 GGNBP2Q9H3C7 697 aa24.26■■□□□ 1.47
TRPC1-203ENST00000476941 TBC1D2Q9BYX2 928 aa24.26■■□□□ 1.47
TRPC1-203ENST00000476941 KIDINS220Q9ULH0 1771 aa24.26■■□□□ 1.47
TRPC1-203ENST00000476941 MAPK8IP3Q9UPT6 1336 aa24.25■■□□□ 1.47
TRPC1-203ENST00000476941 MCM4P33991 863 aa24.25■■□□□ 1.47
TRPC1-203ENST00000476941 POLR3AO14802 1390 aaPredicted RBP24.25■■□□□ 1.47
TRPC1-203ENST00000476941 OSCARQ8IYS5 282 aa24.24■■□□□ 1.47
TRPC1-203ENST00000476941 EVC2Q86UK5 1308 aa24.23■■□□□ 1.47
TRPC1-203ENST00000476941 MINK1Q8N4C8 1332 aaPredicted RBP24.23■■□□□ 1.47
TRPC1-203ENST00000476941 IDI1Q13907 227 aa24.23■■□□□ 1.47
TRPC1-203ENST00000476941 RLBP1P12271 317 aa24.22■■□□□ 1.47
TRPC1-203ENST00000476941 VGFO15240 615 aaPredicted RBP24.22■■□□□ 1.47
TRPC1-203ENST00000476941 RARSP54136 660 aaKnown RBP24.22■■□□□ 1.47
TRPC1-203ENST00000476941 TSR2Q969E8 191 aaKnown RBP24.21■■□□□ 1.47
TRPC1-203ENST00000476941 MRE11P49959 708 aa24.2■■□□□ 1.46
TRPC1-203ENST00000476941 MYH16Q9H6N6 1097 aa24.2■■□□□ 1.46
TRPC1-203ENST00000476941 TRAK2O60296 914 aa24.19■■□□□ 1.46
TRPC1-203ENST00000476941 PDE3AQ14432 1141 aa24.19■■□□□ 1.46
TRPC1-203ENST00000476941 KIAA1210Q9ULL0 1709 aa24.19■■□□□ 1.46
TRPC1-203ENST00000476941 NLRP1Q9C000 1473 aa24.19■■□□□ 1.46
TRPC1-203ENST00000476941 ESPNB1AK53 854 aa24.19■■□□□ 1.46
TRPC1-203ENST00000476941 TBC1D32Q96NH3 1257 aa24.18■■□□□ 1.46
TRPC1-203ENST00000476941 SBNO2Q9Y2G9 1366 aa24.17■■□□□ 1.46
TRPC1-203ENST00000476941 PCDHB15Q9Y5E8 787 aa24.16■■□□□ 1.46
TRPC1-203ENST00000476941 POGZQ7Z3K3 1410 aa24.16■■□□□ 1.46
TRPC1-203ENST00000476941 STAG3Q9UJ98 1225 aa24.15■■□□□ 1.46
TRPC1-203ENST00000476941 ADGRB3O60242 1522 aa24.15■■□□□ 1.46
TRPC1-203ENST00000476941 NGEFQ8N5V2 710 aa24.15■■□□□ 1.46
TRPC1-203ENST00000476941 GRPEL1Q9HAV7 217 aa24.14■■□□□ 1.46
TRPC1-203ENST00000476941 NRXN1Q9ULB1 1477 aa24.14■■□□□ 1.45
TRPC1-203ENST00000476941 ERBB4Q15303 1308 aa24.14■■□□□ 1.45
TRPC1-203ENST00000476941 FBLN1P23142 703 aa24.14■■□□□ 1.45
TRPC1-203ENST00000476941 VIRMAQ69YN4 1812 aaKnown RBP24.14■■□□□ 1.45
TRPC1-203ENST00000476941 PRAM1Q96QH2 718 aa24.13■■□□□ 1.45
TRPC1-203ENST00000476941 RPGRIP1LQ68CZ1 1315 aa24.13■■□□□ 1.45
TRPC1-203ENST00000476941 FBXO31Q5XUX0 539 aaPredicted RBP24.13■■□□□ 1.45
TRPC1-203ENST00000476941 TRIM44Q96DX7 344 aaPredicted RBP24.12■■□□□ 1.45
TRPC1-203ENST00000476941 FTSJ3Q8IY81 847 aaKnown RBP24.12■■□□□ 1.45
TRPC1-203ENST00000476941 CHMP5Q9NZZ3 219 aa24.11■■□□□ 1.45
TRPC1-203ENST00000476941 WDR63Q8IWG1 891 aa24.1■■□□□ 1.45
TRPC1-203ENST00000476941 QRICH2Q9H0J4 1663 aa24.09■■□□□ 1.45
TRPC1-203ENST00000476941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.09■■□□□ 1.45
TRPC1-203ENST00000476941 EXOSC9Q06265 439 aaKnown RBP24.09■■□□□ 1.45
TRPC1-203ENST00000476941 SMC4Q9NTJ3 1288 aa24.09■■□□□ 1.45
TRPC1-203ENST00000476941 FRMPD1Q5SYB0 1578 aa24.08■■□□□ 1.45
TRPC1-203ENST00000476941 ADGRB1O14514 1584 aa24.08■■□□□ 1.45
TRPC1-203ENST00000476941 IFT172Q9UG01 1749 aa24.07■■□□□ 1.44
TRPC1-203ENST00000476941 PDZRN3Q9UPQ7 1066 aa24.07■■□□□ 1.44
TRPC1-203ENST00000476941 LMTK2Q8IWU2 1503 aa24.07■■□□□ 1.44
TRPC1-203ENST00000476941 ANKRD36BQ8N2N9 1353 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms