RNA–Protein interactions for RNA: ENST00000476539.5

SUPT20H-214, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 528 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-214ENST00000476539 DMRTA1Q5VZB9 504 aa7.45□□□□□ -1.22
SUPT20H-214ENST00000476539 SAMD7Q7Z3H4 446 aa7.45□□□□□ -1.22
SUPT20H-214ENST00000476539 TSC1Q92574 1164 aa7.45□□□□□ -1.22
SUPT20H-214ENST00000476539 HLA-CQ95604 372 aa7.45□□□□□ -1.22
SUPT20H-214ENST00000476539 EMP3P54852 163 aa7.44□□□□□ -1.22
SUPT20H-214ENST00000476539 CTDSPL2Q05D32 466 aa7.44□□□□□ -1.22
SUPT20H-214ENST00000476539 OTUD5Q96G74 571 aa7.44□□□□□ -1.22
SUPT20H-214ENST00000476539 HMX1Q9NP08 348 aaPredicted RBP7.44□□□□□ -1.22
SUPT20H-214ENST00000476539 POM121CA8CG34 1229 aa7.43□□□□□ -1.22
SUPT20H-214ENST00000476539 POTEEQ6S8J3 1075 aa7.43□□□□□ -1.22
SUPT20H-214ENST00000476539 TRAIPQ9BWF2 469 aa7.43□□□□□ -1.22
SUPT20H-214ENST00000476539 PRR14Q9BWN1 585 aa7.43□□□□□ -1.22
SUPT20H-214ENST00000476539 TRIM34Q9BYJ4 488 aa7.43□□□□□ -1.22
SUPT20H-214ENST00000476539 AXIN2Q9Y2T1 843 aa7.43□□□□□ -1.22
SUPT20H-214ENST00000476539 CFAP99D6REC4 459 aa7.42□□□□□ -1.22
SUPT20H-214ENST00000476539 TK2O00142 265 aa7.42□□□□□ -1.22
SUPT20H-214ENST00000476539 IRF5Q13568 498 aa7.42□□□□□ -1.22
SUPT20H-214ENST00000476539 Q3C1V9 767 aa7.42□□□□□ -1.22
SUPT20H-214ENST00000476539 PDE4CQ08493 712 aa7.41□□□□□ -1.22
SUPT20H-214ENST00000476539 RETREG3Q86VR2 466 aa7.41□□□□□ -1.22
SUPT20H-214ENST00000476539 ZNF687Q8N1G0 1237 aa7.41□□□□□ -1.22
SUPT20H-214ENST00000476539 KCTD17Q8N5Z5 321 aa7.41□□□□□ -1.22
SUPT20H-214ENST00000476539 PNMA1Q8ND90 353 aa7.41□□□□□ -1.22
SUPT20H-214ENST00000476539 ZFRQ96KR1 1074 aaKnown RBP7.41□□□□□ -1.22
SUPT20H-214ENST00000476539 GPR37L1O60883 481 aa7.4□□□□□ -1.22
SUPT20H-214ENST00000476539 SOX11P35716 441 aa7.4□□□□□ -1.22
SUPT20H-214ENST00000476539 LHX8Q68G74 356 aa7.4□□□□□ -1.22
SUPT20H-214ENST00000476539 MRPL50Q8N5N7 158 aaKnown RBP7.4□□□□□ -1.22
SUPT20H-214ENST00000476539 PRR7Q8TB68 274 aa7.4□□□□□ -1.22
SUPT20H-214ENST00000476539 LRRN4Q8WUT4 740 aa7.4□□□□□ -1.22
SUPT20H-214ENST00000476539 LRCH3Q96II8 777 aa7.4□□□□□ -1.22
SUPT20H-214ENST00000476539 BHMG1C9JSJ3 638 aaPredicted RBP7.39□□□□□ -1.23
SUPT20H-214ENST00000476539 ACTN4O43707 911 aaKnown RBP7.39□□□□□ -1.23
SUPT20H-214ENST00000476539 MORN1Q5T089 497 aa7.39□□□□□ -1.23
SUPT20H-214ENST00000476539 DESI1Q6ICB0 168 aa7.39□□□□□ -1.23
SUPT20H-214ENST00000476539 RETREG2Q8NC44 543 aa7.39□□□□□ -1.23
SUPT20H-214ENST00000476539 ST18O60284 1047 aa7.38□□□□□ -1.23
SUPT20H-214ENST00000476539 HDGFL1Q5TGJ6 251 aa7.38□□□□□ -1.23
SUPT20H-214ENST00000476539 PBXIP1Q96AQ6 731 aa7.38□□□□□ -1.23
SUPT20H-214ENST00000476539 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.38□□□□□ -1.23
SUPT20H-214ENST00000476539 ACIN1Q9UKV3 1341 aaKnown RBP7.37□□□□□ -1.23
SUPT20H-214ENST00000476539 FAM205CA6NFA0 338 aa7.36□□□□□ -1.23
SUPT20H-214ENST00000476539 VAC14Q08AM6 782 aa7.36□□□□□ -1.23
SUPT20H-214ENST00000476539 ADAMTS19Q8TE59 1207 aa7.36□□□□□ -1.23
SUPT20H-214ENST00000476539 CCDC9Q9Y3X0 531 aaKnown RBP7.36□□□□□ -1.23
SUPT20H-214ENST00000476539 ADGRD1Q6QNK2 874 aa7.35□□□□□ -1.23
SUPT20H-214ENST00000476539 ANKK1Q8NFD2 765 aa7.35□□□□□ -1.23
SUPT20H-214ENST00000476539 SYMPKQ92797 1274 aaKnown RBP7.35□□□□□ -1.23
SUPT20H-214ENST00000476539 MARVELD3Q96A59 401 aa7.35□□□□□ -1.23
SUPT20H-214ENST00000476539 SLC27A5Q9Y2P5 690 aa7.35□□□□□ -1.23
SUPT20H-214ENST00000476539 LSM11P83369 360 aaKnown RBP eCLIP7.34□□□□□ -1.23
SUPT20H-214ENST00000476539 NR6A1Q15406 480 aa7.34□□□□□ -1.23
SUPT20H-214ENST00000476539 PPP1R12CQ9BZL4 782 aa7.34□□□□□ -1.23
SUPT20H-214ENST00000476539 ALG2Q9H553 416 aa7.34□□□□□ -1.23
SUPT20H-214ENST00000476539 USTQ9Y2C2 406 aa7.34□□□□□ -1.23
SUPT20H-214ENST00000476539 SALL2Q9Y467 1007 aaPredicted RBP7.34□□□□□ -1.23
SUPT20H-214ENST00000476539 PER1O15534 1290 aaPredicted RBP7.33□□□□□ -1.24
SUPT20H-214ENST00000476539 PUS10Q3MIT2 529 aaKnown RBP7.33□□□□□ -1.24
SUPT20H-214ENST00000476539 EPS8L1Q8TE68 723 aa7.33□□□□□ -1.24
SUPT20H-214ENST00000476539 USB1Q9BQ65 265 aaKnown RBP7.33□□□□□ -1.24
SUPT20H-214ENST00000476539 GOLGA8CPA6NN73 597 aa7.32□□□□□ -1.24
SUPT20H-214ENST00000476539 PATL2C9JE40 543 aaKnown RBP7.32□□□□□ -1.24
SUPT20H-214ENST00000476539 EIF4G2P78344 907 aaKnown RBP eCLIP7.32□□□□□ -1.24
SUPT20H-214ENST00000476539 SEMA3FQ13275 785 aa7.32□□□□□ -1.24
SUPT20H-214ENST00000476539 CFAP70Q5T0N1 1121 aa7.32□□□□□ -1.24
SUPT20H-214ENST00000476539 LYPD8Q6UX82 237 aa7.32□□□□□ -1.24
SUPT20H-214ENST00000476539 STAC3Q96MF2 364 aa7.32□□□□□ -1.24
SUPT20H-214ENST00000476539 HS3ST6Q96QI5 342 aa7.32□□□□□ -1.24
SUPT20H-214ENST00000476539 ZC3H4Q9UPT8 1303 aaKnown RBP7.31□□□□□ -1.24
SUPT20H-214ENST00000476539 SOWAHBA6NEL2 793 aa7.31□□□□□ -1.24
SUPT20H-214ENST00000476539 NR1I2O75469 434 aa7.31□□□□□ -1.24
SUPT20H-214ENST00000476539 CSB-PGBD3P0DP91 1061 aa7.31□□□□□ -1.24
SUPT20H-214ENST00000476539 PPP4CP60510 307 aa7.31□□□□□ -1.24
SUPT20H-214ENST00000476539 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.3□□□□□ -1.24
SUPT20H-214ENST00000476539 PALM3A6NDB9 673 aaPredicted RBP7.3□□□□□ -1.24
SUPT20H-214ENST00000476539 HRO43593 1189 aa7.3□□□□□ -1.24
SUPT20H-214ENST00000476539 RANGAP1P46060 587 aaPredicted RBP7.3□□□□□ -1.24
SUPT20H-214ENST00000476539 RNF19BQ6ZMZ0 732 aa7.3□□□□□ -1.24
SUPT20H-214ENST00000476539 AEBP1Q8IUX7 1158 aa7.3□□□□□ -1.24
SUPT20H-214ENST00000476539 HPS5Q9UPZ3 1129 aa7.3□□□□□ -1.24
SUPT20H-214ENST00000476539 PCDHB3Q9Y5E6 796 aa7.3□□□□□ -1.24
SUPT20H-214ENST00000476539 FMNL1O95466 1100 aaPredicted RBP7.29□□□□□ -1.24
SUPT20H-214ENST00000476539 RFX1P22670 979 aa7.29□□□□□ -1.24
SUPT20H-214ENST00000476539 NR1H3Q13133 447 aa7.29□□□□□ -1.24
SUPT20H-214ENST00000476539 PTPRNQ16849 979 aa7.29□□□□□ -1.24
SUPT20H-214ENST00000476539 BRICD5Q6PL45 260 aa7.29□□□□□ -1.24
SUPT20H-214ENST00000476539 BLOC1S3Q6QNY0 202 aa7.29□□□□□ -1.24
SUPT20H-214ENST00000476539 ZNF592Q92610 1267 aa7.29□□□□□ -1.24
SUPT20H-214ENST00000476539 UCN2Q96RP3 112 aa7.29□□□□□ -1.24
SUPT20H-214ENST00000476539 TSR3Q9UJK0 312 aaKnown RBP7.29□□□□□ -1.24
SUPT20H-214ENST00000476539 JUNDP17535 347 aa7.28□□□□□ -1.24
SUPT20H-214ENST00000476539 FKBPLQ9UIM3 349 aa7.28□□□□□ -1.24
SUPT20H-214ENST00000476539 ZBBXA8MT70 800 aa7.27□□□□□ -1.25
SUPT20H-214ENST00000476539 F12P00748 615 aaPredicted RBP7.27□□□□□ -1.25
SUPT20H-214ENST00000476539 LMOD1P29536 600 aaPredicted RBP7.27□□□□□ -1.25
SUPT20H-214ENST00000476539 APLP1P51693 650 aa7.27□□□□□ -1.25
SUPT20H-214ENST00000476539 MAFBQ9Y5Q3 323 aaPredicted RBP7.27□□□□□ -1.25
SUPT20H-214ENST00000476539 FBXO45P0C2W1 286 aa7.26□□□□□ -1.25
SUPT20H-214ENST00000476539 BCAMP50895 628 aa7.26□□□□□ -1.25
SUPT20H-214ENST00000476539 SRPK2P78362 688 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms