RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 AMER1Q5JTC6 1135 aaPredicted RBP27.74■■■□□ 2.03
ITGA4-207ENST00000476089 NPC1L1Q9UHC9 1359 aa27.74■■■□□ 2.03
ITGA4-207ENST00000476089 SRPK2P78362 688 aaKnown RBP27.74■■■□□ 2.03
ITGA4-207ENST00000476089 SLC12A5Q9H2X9 1139 aa27.72■■■□□ 2.03
ITGA4-207ENST00000476089 CABP2Q9NPB3 220 aa27.72■■■□□ 2.03
ITGA4-207ENST00000476089 CEP170BQ9Y4F5 1589 aaPredicted RBP27.72■■■□□ 2.03
ITGA4-207ENST00000476089 ADAMTS13Q76LX8 1427 aa27.71■■■□□ 2.03
ITGA4-207ENST00000476089 SIRT1Q96EB6 747 aa27.7■■■□□ 2.02
ITGA4-207ENST00000476089 ATAD2Q6PL18 1390 aa27.69■■■□□ 2.02
ITGA4-207ENST00000476089 NINLQ9Y2I6 1382 aa27.69■■■□□ 2.02
ITGA4-207ENST00000476089 WAPLQ7Z5K2 1190 aa27.69■■■□□ 2.02
ITGA4-207ENST00000476089 KNDC1Q76NI1 1749 aa27.69■■■□□ 2.02
ITGA4-207ENST00000476089 CARD14Q9BXL6 1004 aa27.68■■■□□ 2.02
ITGA4-207ENST00000476089 TECPR2O15040 1411 aa27.67■■■□□ 2.02
ITGA4-207ENST00000476089 PNISRQ8TF01 805 aaKnown RBP27.67■■■□□ 2.02
ITGA4-207ENST00000476089 FAM135BQ49AJ0 1406 aa27.67■■■□□ 2.02
ITGA4-207ENST00000476089 CDK19Q9BWU1 502 aa27.65■■■□□ 2.02
ITGA4-207ENST00000476089 SETD1BQ9UPS6 1966 aaKnown RBP27.65■■■□□ 2.02
ITGA4-207ENST00000476089 PLEKHH1Q9ULM0 1364 aa27.64■■■□□ 2.02
ITGA4-207ENST00000476089 ANKRD36BQ8N2N9 1353 aa27.64■■■□□ 2.01
ITGA4-207ENST00000476089 NSD3Q9BZ95 1437 aa27.64■■■□□ 2.01
ITGA4-207ENST00000476089 MED14O60244 1454 aa27.63■■■□□ 2.01
ITGA4-207ENST00000476089 CPS1P31327 1500 aa27.63■■■□□ 2.01
ITGA4-207ENST00000476089 SLC26A8Q96RN1 970 aa27.63■■■□□ 2.01
ITGA4-207ENST00000476089 TBX22Q9Y458 520 aa27.63■■■□□ 2.01
ITGA4-207ENST00000476089 GTF3C3Q9Y5Q9 886 aa27.63■■■□□ 2.01
ITGA4-207ENST00000476089 SCAF1Q9H7N4 1312 aaKnown RBP27.63■■■□□ 2.01
ITGA4-207ENST00000476089 ZNF142P52746 1687 aaPredicted RBP27.62■■■□□ 2.01
ITGA4-207ENST00000476089 DIP2AQ14689 1571 aa27.6■■■□□ 2.01
ITGA4-207ENST00000476089 PPP2R1AP30153 589 aa27.6■■■□□ 2.01
ITGA4-207ENST00000476089 TERF2IPQ9NYB0 399 aa27.58■■■□□ 2.01
ITGA4-207ENST00000476089 CGNL1Q0VF96 1302 aa27.57■■■□□ 2
ITGA4-207ENST00000476089 ANKLE2Q86XL3 938 aa27.57■■■□□ 2
ITGA4-207ENST00000476089 USP32Q8NFA0 1604 aa27.56■■■□□ 2
ITGA4-207ENST00000476089 WASLO00401 505 aaPredicted RBP27.55■■■□□ 2
ITGA4-207ENST00000476089 ROBO2Q9HCK4 1378 aa27.55■■■□□ 2
ITGA4-207ENST00000476089 HDGFL2Q7Z4V5 671 aaPredicted RBP27.53■■■□□ 2
ITGA4-207ENST00000476089 ZBED9Q6R2W3 1325 aa27.53■■■□□ 2
ITGA4-207ENST00000476089 AMOTL2Q9Y2J4 779 aa27.53■■■□□ 2
ITGA4-207ENST00000476089 A0A1W2PP64 1363 aa27.52■■■□□ 2
ITGA4-207ENST00000476089 MORC1Q86VD1 984 aa27.51■■□□□ 1.99
ITGA4-207ENST00000476089 PTPRUQ92729 1446 aa27.51■■□□□ 1.99
ITGA4-207ENST00000476089 NSD2O96028 1365 aa27.51■■□□□ 1.99
ITGA4-207ENST00000476089 CABP1Q9NZU7 370 aa27.5■■□□□ 1.99
ITGA4-207ENST00000476089 PIK3R4Q99570 1358 aa27.47■■□□□ 1.99
ITGA4-207ENST00000476089 PTCH1Q13635 1447 aa27.46■■□□□ 1.99
ITGA4-207ENST00000476089 ATP7BP35670 1465 aa27.45■■□□□ 1.98
ITGA4-207ENST00000476089 CD163L1Q9NR16 1453 aa27.45■■□□□ 1.98
ITGA4-207ENST00000476089 ADGRB2O60241 1585 aa27.44■■□□□ 1.98
ITGA4-207ENST00000476089 INSRP06213 1382 aa27.44■■□□□ 1.98
ITGA4-207ENST00000476089 NUDT16Q96DE0 195 aaKnown RBP27.44■■□□□ 1.98
ITGA4-207ENST00000476089 WDR43Q15061 677 aaKnown RBP eCLIP27.43■■□□□ 1.98
ITGA4-207ENST00000476089 PPIP5K1Q6PFW1 1433 aa27.42■■□□□ 1.98
ITGA4-207ENST00000476089 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.41■■□□□ 1.98
ITGA4-207ENST00000476089 CCDC61Q9Y6R9 512 aa27.41■■□□□ 1.98
ITGA4-207ENST00000476089 XRN1Q8IZH2 1706 aaKnown RBP27.39■■□□□ 1.98
ITGA4-207ENST00000476089 TNNT2P45379 298 aaPredicted RBP27.38■■□□□ 1.97
ITGA4-207ENST00000476089 KCNA6P17658 529 aa27.35■■□□□ 1.97
ITGA4-207ENST00000476089 NPHP4O75161 1426 aaPredicted RBP27.35■■□□□ 1.97
ITGA4-207ENST00000476089 POLR3AO14802 1390 aaPredicted RBP27.34■■□□□ 1.97
ITGA4-207ENST00000476089 ADAMTS8Q9UP79 889 aa27.34■■□□□ 1.97
ITGA4-207ENST00000476089 BLMP54132 1417 aaPredicted RBP27.34■■□□□ 1.97
ITGA4-207ENST00000476089 FYB1O15117 783 aa27.34■■□□□ 1.97
ITGA4-207ENST00000476089 GGNBP2Q9H3C7 697 aa27.34■■□□□ 1.97
ITGA4-207ENST00000476089 CPSF1Q10570 1443 aaKnown RBP27.33■■□□□ 1.97
ITGA4-207ENST00000476089 CDC42BPGQ6DT37 1551 aa27.32■■□□□ 1.96
ITGA4-207ENST00000476089 ANKRD26Q9UPS8 1709 aa27.32■■□□□ 1.96
ITGA4-207ENST00000476089 ZNF692Q9BU19 519 aaPredicted RBP27.32■■□□□ 1.96
ITGA4-207ENST00000476089 PRR36Q9H6K5 1346 aa27.31■■□□□ 1.96
ITGA4-207ENST00000476089 CHD2O14647 1828 aaKnown RBP27.31■■□□□ 1.96
ITGA4-207ENST00000476089 EDC4Q6P2E9 1401 aaKnown RBP27.31■■□□□ 1.96
ITGA4-207ENST00000476089 CFAP53Q96M91 514 aa27.31■■□□□ 1.96
ITGA4-207ENST00000476089 KIF20BQ96Q89 1820 aa27.31■■□□□ 1.96
ITGA4-207ENST00000476089 MTHFSP49914 203 aa27.29■■□□□ 1.96
ITGA4-207ENST00000476089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.29■■□□□ 1.96
ITGA4-207ENST00000476089 NCKAP5LQ9HCH0 1330 aa27.29■■□□□ 1.96
ITGA4-207ENST00000476089 ITSN1Q15811 1721 aa27.29■■□□□ 1.96
ITGA4-207ENST00000476089 SENP3-EIF4A1A0A087X0R7 540 aa27.27■■□□□ 1.96
ITGA4-207ENST00000476089 NUTM2FA1L443 756 aa27.26■■□□□ 1.95
ITGA4-207ENST00000476089 AKAP12Q02952 1782 aa27.25■■□□□ 1.95
ITGA4-207ENST00000476089 TOPAZ1Q8N9V7 1692 aa27.25■■□□□ 1.95
ITGA4-207ENST00000476089 PLEKHG3A1L390 1219 aa27.25■■□□□ 1.95
ITGA4-207ENST00000476089 MON2Q7Z3U7 1717 aa27.24■■□□□ 1.95
ITGA4-207ENST00000476089 NEFLP07196 543 aa27.24■■□□□ 1.95
ITGA4-207ENST00000476089 SALL2Q9Y467 1007 aaPredicted RBP27.23■■□□□ 1.95
ITGA4-207ENST00000476089 SMG6Q86US8 1419 aaKnown RBP27.22■■□□□ 1.95
ITGA4-207ENST00000476089 ACEP12821 1306 aa27.21■■□□□ 1.95
ITGA4-207ENST00000476089 PDE3BQ13370 1112 aa27.2■■□□□ 1.95
ITGA4-207ENST00000476089 NUDCQ9Y266 331 aa27.2■■□□□ 1.94
ITGA4-207ENST00000476089 ANKARQ7Z5J8 1434 aa27.19■■□□□ 1.94
ITGA4-207ENST00000476089 SUPT16HQ9Y5B9 1047 aaKnown RBP27.18■■□□□ 1.94
ITGA4-207ENST00000476089 NME9Q86XW9 330 aa27.16■■□□□ 1.94
ITGA4-207ENST00000476089 COG3Q96JB2 828 aa27.16■■□□□ 1.94
ITGA4-207ENST00000476089 SHPRHQ149N8 1683 aa27.15■■□□□ 1.94
ITGA4-207ENST00000476089 NKTRP30414 1462 aaKnown RBP27.15■■□□□ 1.94
ITGA4-207ENST00000476089 CCDC146Q8IYE0 955 aa27.14■■□□□ 1.94
ITGA4-207ENST00000476089 FMN2Q9NZ56 1722 aa27.14■■□□□ 1.94
ITGA4-207ENST00000476089 USP6P35125 1406 aa27.14■■□□□ 1.93
ITGA4-207ENST00000476089 NGDNQ8NEJ9 315 aaKnown RBP27.13■■□□□ 1.93
ITGA4-207ENST00000476089 KDM4FA0A1W2PPD8 638 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms