RNA–Protein interactions for RNA: ENST00000476015.1

LAMP3-204, Transcript of lysosomal associated membrane protein 3, humanhuman

TSL 4

Gene LAMP3, Length 835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-204ENST00000476015 SAFB2Q14151 953 aaKnown RBP eCLIP24.79■■□□□ 1.56
LAMP3-204ENST00000476015 ARHGEF28Q8N1W1 1705 aaKnown RBP24.78■■□□□ 1.56
LAMP3-204ENST00000476015 WAPLQ7Z5K2 1190 aa24.77■■□□□ 1.56
LAMP3-204ENST00000476015 AMOTL2Q9Y2J4 779 aa24.77■■□□□ 1.56
LAMP3-204ENST00000476015 FAM135BQ49AJ0 1406 aa24.77■■□□□ 1.56
LAMP3-204ENST00000476015 DIP2AQ14689 1571 aa24.76■■□□□ 1.55
LAMP3-204ENST00000476015 QRICH2Q9H0J4 1663 aa24.76■■□□□ 1.55
LAMP3-204ENST00000476015 PIK3R4Q99570 1358 aa24.76■■□□□ 1.55
LAMP3-204ENST00000476015 TECPR2O15040 1411 aa24.75■■□□□ 1.55
LAMP3-204ENST00000476015 MED1Q15648 1581 aaPredicted RBP24.75■■□□□ 1.55
LAMP3-204ENST00000476015 PANK3Q9H999 370 aa24.74■■□□□ 1.55
LAMP3-204ENST00000476015 MINK1Q8N4C8 1332 aaPredicted RBP24.74■■□□□ 1.55
LAMP3-204ENST00000476015 SCAF1Q9H7N4 1312 aaKnown RBP24.73■■□□□ 1.55
LAMP3-204ENST00000476015 PIP4K2BP78356 416 aa24.72■■□□□ 1.55
LAMP3-204ENST00000476015 NPHP4O75161 1426 aaPredicted RBP24.71■■□□□ 1.55
LAMP3-204ENST00000476015 CDK19Q9BWU1 502 aa24.7■■□□□ 1.54
LAMP3-204ENST00000476015 SRPK2P78362 688 aaKnown RBP24.69■■□□□ 1.54
LAMP3-204ENST00000476015 PTPRUQ92729 1446 aa24.69■■□□□ 1.54
LAMP3-204ENST00000476015 PER1O15534 1290 aaPredicted RBP24.68■■□□□ 1.54
LAMP3-204ENST00000476015 KNDC1Q76NI1 1749 aa24.68■■□□□ 1.54
LAMP3-204ENST00000476015 PLEKHH1Q9ULM0 1364 aa24.67■■□□□ 1.54
LAMP3-204ENST00000476015 CCER2I3L3R5 266 aa24.67■■□□□ 1.54
LAMP3-204ENST00000476015 CABP2Q9NPB3 220 aa24.67■■□□□ 1.54
LAMP3-204ENST00000476015 TOM1O60784 492 aa24.66■■□□□ 1.54
LAMP3-204ENST00000476015 TMC1Q8TDI8 760 aa24.66■■□□□ 1.54
LAMP3-204ENST00000476015 ROBO2Q9HCK4 1378 aa24.66■■□□□ 1.54
LAMP3-204ENST00000476015 CPS1P31327 1500 aa24.66■■□□□ 1.54
LAMP3-204ENST00000476015 PRKRIP1Q9H875 184 aaPredicted RBP24.65■■□□□ 1.54
LAMP3-204ENST00000476015 WASLO00401 505 aaPredicted RBP24.64■■□□□ 1.54
LAMP3-204ENST00000476015 KNSTRNQ9Y448 316 aa24.64■■□□□ 1.54
LAMP3-204ENST00000476015 ATAD2Q6PL18 1390 aa24.63■■□□□ 1.53
LAMP3-204ENST00000476015 TULP4Q9NRJ4 1543 aa24.62■■□□□ 1.53
LAMP3-204ENST00000476015 KCNA6P17658 529 aa24.62■■□□□ 1.53
LAMP3-204ENST00000476015 SLC12A5Q9H2X9 1139 aa24.62■■□□□ 1.53
LAMP3-204ENST00000476015 NINLQ9Y2I6 1382 aa24.6■■□□□ 1.53
LAMP3-204ENST00000476015 PTCH1Q13635 1447 aa24.6■■□□□ 1.53
LAMP3-204ENST00000476015 KTN1Q86UP2 1357 aaKnown RBP24.59■■□□□ 1.53
LAMP3-204ENST00000476015 RALBP1Q15311 655 aa24.59■■□□□ 1.53
LAMP3-204ENST00000476015 PHF23Q9BUL5 403 aaPredicted RBP24.58■■□□□ 1.53
LAMP3-204ENST00000476015 TERF2IPQ9NYB0 399 aa24.55■■□□□ 1.52
LAMP3-204ENST00000476015 CHD2O14647 1828 aaKnown RBP24.55■■□□□ 1.52
LAMP3-204ENST00000476015 CNGB1Q14028 1251 aaPredicted RBP24.54■■□□□ 1.52
LAMP3-204ENST00000476015 NUDT16Q96DE0 195 aaKnown RBP24.54■■□□□ 1.52
LAMP3-204ENST00000476015 CARD14Q9BXL6 1004 aa24.54■■□□□ 1.52
LAMP3-204ENST00000476015 XRN1Q8IZH2 1706 aaKnown RBP24.53■■□□□ 1.52
LAMP3-204ENST00000476015 MYOM1P52179 1685 aa24.53■■□□□ 1.52
LAMP3-204ENST00000476015 HDGFL2Q7Z4V5 671 aaPredicted RBP24.52■■□□□ 1.52
LAMP3-204ENST00000476015 CABP1Q9NZU7 370 aa24.52■■□□□ 1.52
LAMP3-204ENST00000476015 CCDC61Q9Y6R9 512 aa24.52■■□□□ 1.52
LAMP3-204ENST00000476015 NPC1L1Q9UHC9 1359 aa24.51■■□□□ 1.51
LAMP3-204ENST00000476015 AMER1Q5JTC6 1135 aaPredicted RBP24.5■■□□□ 1.51
LAMP3-204ENST00000476015 CC2D1BQ5T0F9 858 aaKnown RBP24.5■■□□□ 1.51
LAMP3-204ENST00000476015 ANKRD36BQ8N2N9 1353 aa24.5■■□□□ 1.51
LAMP3-204ENST00000476015 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.49■■□□□ 1.51
LAMP3-204ENST00000476015 PROSER2Q86WR7 435 aaPredicted RBP24.48■■□□□ 1.51
LAMP3-204ENST00000476015 ADGRB2O60241 1585 aa24.46■■□□□ 1.51
LAMP3-204ENST00000476015 MYBBP1AQ9BQG0 1328 aaKnown RBP24.45■■□□□ 1.5
LAMP3-204ENST00000476015 ZNF692Q9BU19 519 aaPredicted RBP24.45■■□□□ 1.5
LAMP3-204ENST00000476015 PARD3Q8TEW0 1356 aa24.44■■□□□ 1.5
LAMP3-204ENST00000476015 CGNL1Q0VF96 1302 aa24.43■■□□□ 1.5
LAMP3-204ENST00000476015 PLEKHG3A1L390 1219 aa24.42■■□□□ 1.5
LAMP3-204ENST00000476015 PPIP5K1Q6PFW1 1433 aa24.42■■□□□ 1.5
LAMP3-204ENST00000476015 NSD3Q9BZ95 1437 aa24.42■■□□□ 1.5
LAMP3-204ENST00000476015 C14orf37Q86TY3 774 aa24.41■■□□□ 1.5
LAMP3-204ENST00000476015 MRS2Q9HD23 443 aa24.41■■□□□ 1.5
LAMP3-204ENST00000476015 PRR36Q9H6K5 1346 aa24.4■■□□□ 1.5
LAMP3-204ENST00000476015 A0A1W2PP64 1363 aa24.4■■□□□ 1.5
LAMP3-204ENST00000476015 NWD1Q149M9 1564 aa24.39■■□□□ 1.5
LAMP3-204ENST00000476015 RGS17Q9UGC6 210 aaPredicted RBP24.39■■□□□ 1.49
LAMP3-204ENST00000476015 ATP7BP35670 1465 aa24.38■■□□□ 1.49
LAMP3-204ENST00000476015 NUTM2FA1L443 756 aa24.38■■□□□ 1.49
LAMP3-204ENST00000476015 NLRP13Q86W25 1043 aa24.38■■□□□ 1.49
LAMP3-204ENST00000476015 RBM33Q96EV2 1170 aaKnown RBP24.37■■□□□ 1.49
LAMP3-204ENST00000476015 NKTRP30414 1462 aaKnown RBP24.37■■□□□ 1.49
LAMP3-204ENST00000476015 CCDC184Q52MB2 194 aa24.36■■□□□ 1.49
LAMP3-204ENST00000476015 MORC1Q86VD1 984 aa24.36■■□□□ 1.49
LAMP3-204ENST00000476015 BRD4O60885 1362 aaPredicted RBP24.36■■□□□ 1.49
LAMP3-204ENST00000476015 CD163L1Q9NR16 1453 aa24.36■■□□□ 1.49
LAMP3-204ENST00000476015 ANKARQ7Z5J8 1434 aa24.35■■□□□ 1.49
LAMP3-204ENST00000476015 NCOA3Q9Y6Q9 1424 aa24.35■■□□□ 1.49
LAMP3-204ENST00000476015 NSD2O96028 1365 aa24.35■■□□□ 1.49
LAMP3-204ENST00000476015 C19orf44Q9H6X5 657 aa24.35■■□□□ 1.49
LAMP3-204ENST00000476015 CPSF1Q10570 1443 aaKnown RBP24.35■■□□□ 1.49
LAMP3-204ENST00000476015 ADGRL3Q9HAR2 1447 aa24.35■■□□□ 1.49
LAMP3-204ENST00000476015 LRRC7Q96NW7 1537 aa24.34■■□□□ 1.49
LAMP3-204ENST00000476015 PPP2R1AP30153 589 aa24.33■■□□□ 1.49
LAMP3-204ENST00000476015 YTHDC1Q96MU7 727 aaKnown RBP24.33■■□□□ 1.49
LAMP3-204ENST00000476015 STRCP1A6NGW2 1772 aa24.33■■□□□ 1.49
LAMP3-204ENST00000476015 ACEP12821 1306 aa24.33■■□□□ 1.48
LAMP3-204ENST00000476015 FYB1O15117 783 aa24.31■■□□□ 1.48
LAMP3-204ENST00000476015 USP32Q8NFA0 1604 aa24.31■■□□□ 1.48
LAMP3-204ENST00000476015 NGDNQ8NEJ9 315 aaKnown RBP24.3■■□□□ 1.48
LAMP3-204ENST00000476015 EDC4Q6P2E9 1401 aaKnown RBP24.28■■□□□ 1.48
LAMP3-204ENST00000476015 PMFBP1Q8TBY8 1022 aa24.28■■□□□ 1.48
LAMP3-204ENST00000476015 CDC42BPGQ6DT37 1551 aa24.28■■□□□ 1.48
LAMP3-204ENST00000476015 TMEM94Q12767 1356 aa24.28■■□□□ 1.48
LAMP3-204ENST00000476015 ATF3P18847 181 aa24.27■■□□□ 1.48
LAMP3-204ENST00000476015 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.27■■□□□ 1.48
LAMP3-204ENST00000476015 FAM9BQ8IZU0 186 aa24.26■■□□□ 1.47
LAMP3-204ENST00000476015 PNISRQ8TF01 805 aaKnown RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms