RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 VAC14Q08AM6 782 aa9.78□□□□□ -0.84
SDHB-205ENST00000475506 CFAP70Q5T0N1 1121 aa9.78□□□□□ -0.84
SDHB-205ENST00000475506 SYMPKQ92797 1274 aaKnown RBP9.78□□□□□ -0.84
SDHB-205ENST00000475506 TSC1Q92574 1164 aa9.77□□□□□ -0.85
SDHB-205ENST00000475506 WASHC4Q2M389 1173 aa9.76□□□□□ -0.85
SDHB-205ENST00000475506 HELBQ8NG08 1087 aaPredicted RBP9.76□□□□□ -0.85
SDHB-205ENST00000475506 SLC4A5Q9BY07 1137 aa9.76□□□□□ -0.85
SDHB-205ENST00000475506 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.75□□□□□ -0.85
SDHB-205ENST00000475506 C6orf229H3BNL8 230 aa9.75□□□□□ -0.85
SDHB-205ENST00000475506 CFHP08603 1231 aa9.75□□□□□ -0.85
SDHB-205ENST00000475506 RFX1P22670 979 aa9.75□□□□□ -0.85
SDHB-205ENST00000475506 RANGAP1P46060 587 aaPredicted RBP9.75□□□□□ -0.85
SDHB-205ENST00000475506 SAMD7Q7Z3H4 446 aa9.75□□□□□ -0.85
SDHB-205ENST00000475506 KCNH8Q96L42 1107 aa9.75□□□□□ -0.85
SDHB-205ENST00000475506 ALG2Q9H553 416 aa9.75□□□□□ -0.85
SDHB-205ENST00000475506 AXIN2Q9Y2T1 843 aa9.75□□□□□ -0.85
SDHB-205ENST00000475506 ARHGAP33O14559 1287 aa9.74□□□□□ -0.85
SDHB-205ENST00000475506 FAM98CQ17RN3 349 aaKnown RBP9.74□□□□□ -0.85
SDHB-205ENST00000475506 PBXIP1Q96AQ6 731 aa9.74□□□□□ -0.85
SDHB-205ENST00000475506 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
SDHB-205ENST00000475506 PPP1R12CQ9BZL4 782 aa9.73□□□□□ -0.85
SDHB-205ENST00000475506 NR6A1Q15406 480 aa9.72□□□□□ -0.85
SDHB-205ENST00000475506 PRR7Q8TB68 274 aa9.72□□□□□ -0.85
SDHB-205ENST00000475506 UCN2Q96RP3 112 aa9.72□□□□□ -0.85
SDHB-205ENST00000475506 VPS9D1Q9Y2B5 631 aa9.72□□□□□ -0.85
SDHB-205ENST00000475506 ACIN1Q9UKV3 1341 aaKnown RBP9.72□□□□□ -0.85
SDHB-205ENST00000475506 ATP6V1AP38606 617 aa9.71□□□□□ -0.86
SDHB-205ENST00000475506 VARS2Q5ST30 1063 aaKnown RBP9.71□□□□□ -0.86
SDHB-205ENST00000475506 SLF2Q8IX21 1173 aa9.71□□□□□ -0.86
SDHB-205ENST00000475506 PALM3A6NDB9 673 aaPredicted RBP9.7□□□□□ -0.86
SDHB-205ENST00000475506 HDGFP51858 240 aaKnown RBP9.7□□□□□ -0.86
SDHB-205ENST00000475506 GRIPAP1Q4V328 841 aa9.7□□□□□ -0.86
SDHB-205ENST00000475506 CARNS1A5YM72 827 aa9.69□□□□□ -0.86
SDHB-205ENST00000475506 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
SDHB-205ENST00000475506 ERBB3P21860 1342 aa9.68□□□□□ -0.86
SDHB-205ENST00000475506 OTUD5Q96G74 571 aa9.68□□□□□ -0.86
SDHB-205ENST00000475506 BHMG1C9JSJ3 638 aaPredicted RBP9.67□□□□□ -0.86
SDHB-205ENST00000475506 PUS10Q3MIT2 529 aaKnown RBP9.67□□□□□ -0.86
SDHB-205ENST00000475506 MORN1Q5T089 497 aa9.67□□□□□ -0.86
SDHB-205ENST00000475506 TFIP11Q9UBB9 837 aaKnown RBP9.67□□□□□ -0.86
SDHB-205ENST00000475506 RNF40O75150 1001 aa9.66□□□□□ -0.86
SDHB-205ENST00000475506 LMOD1P29536 600 aaPredicted RBP9.66□□□□□ -0.86
SDHB-205ENST00000475506 SLC4A3P48751 1232 aa9.66□□□□□ -0.86
SDHB-205ENST00000475506 LAPTM4BQ86VI4 370 aa9.66□□□□□ -0.86
SDHB-205ENST00000475506 RETREG3Q86VR2 466 aa9.66□□□□□ -0.86
SDHB-205ENST00000475506 SLC27A5Q9Y2P5 690 aa9.66□□□□□ -0.86
SDHB-205ENST00000475506 RGS22Q8NE09 1264 aa9.64□□□□□ -0.87
SDHB-205ENST00000475506 ZFRQ96KR1 1074 aaKnown RBP9.64□□□□□ -0.87
SDHB-205ENST00000475506 CDCA8Q53HL2 280 aa9.63□□□□□ -0.87
SDHB-205ENST00000475506 TBC1D9Q6ZT07 1266 aa9.63□□□□□ -0.87
SDHB-205ENST00000475506 USTQ9Y2C2 406 aa9.63□□□□□ -0.87
SDHB-205ENST00000475506 MAFBQ9Y5Q3 323 aaPredicted RBP9.63□□□□□ -0.87
SDHB-205ENST00000475506 ACTN4O43707 911 aaKnown RBP9.62□□□□□ -0.87
SDHB-205ENST00000475506 SOX11P35716 441 aa9.62□□□□□ -0.87
SDHB-205ENST00000475506 PBX2P40425 430 aa9.62□□□□□ -0.87
SDHB-205ENST00000475506 PDE4CQ08493 712 aa9.62□□□□□ -0.87
SDHB-205ENST00000475506 KMT5BQ4FZB7 885 aa9.62□□□□□ -0.87
SDHB-205ENST00000475506 TMCO4Q5TGY1 634 aa9.62□□□□□ -0.87
SDHB-205ENST00000475506 DESI1Q6ICB0 168 aa9.62□□□□□ -0.87
SDHB-205ENST00000475506 LYPD8Q6UX82 237 aa9.62□□□□□ -0.87
SDHB-205ENST00000475506 RNF19BQ6ZMZ0 732 aa9.62□□□□□ -0.87
SDHB-205ENST00000475506 CSB-PGBD3P0DP91 1061 aa9.61□□□□□ -0.87
SDHB-205ENST00000475506 BLOC1S3Q6QNY0 202 aa9.61□□□□□ -0.87
SDHB-205ENST00000475506 BRD1O95696 1058 aa9.6□□□□□ -0.87
SDHB-205ENST00000475506 SEMA3FQ13275 785 aa9.6□□□□□ -0.87
SDHB-205ENST00000475506 NBPF3Q9H094 633 aa9.6□□□□□ -0.87
SDHB-205ENST00000475506 TMEM88BA6NKF7 163 aa9.59□□□□□ -0.87
SDHB-205ENST00000475506 ATG7O95352 703 aa9.59□□□□□ -0.87
SDHB-205ENST00000475506 FBXO45P0C2W1 286 aa9.59□□□□□ -0.87
SDHB-205ENST00000475506 MFAP1P55081 439 aaKnown RBP9.59□□□□□ -0.87
SDHB-205ENST00000475506 ZNF687Q8N1G0 1237 aa9.59□□□□□ -0.87
SDHB-205ENST00000475506 MARVELD3Q96A59 401 aa9.59□□□□□ -0.87
SDHB-205ENST00000475506 MTMR7Q9Y216 660 aa9.59□□□□□ -0.87
SDHB-205ENST00000475506 ST18O60284 1047 aa9.58□□□□□ -0.88
SDHB-205ENST00000475506 Q3C1V9 767 aa9.58□□□□□ -0.88
SDHB-205ENST00000475506 POTEB3A0JP26 581 aa9.57□□□□□ -0.88
SDHB-205ENST00000475506 PIK3CDO00329 1044 aa9.57□□□□□ -0.88
SDHB-205ENST00000475506 KCNA1Q09470 495 aa9.57□□□□□ -0.88
SDHB-205ENST00000475506 NR1H3Q13133 447 aa9.57□□□□□ -0.88
SDHB-205ENST00000475506 BRICD5Q6PL45 260 aa9.57□□□□□ -0.88
SDHB-205ENST00000475506 POTEBQ6S5H4 581 aa9.57□□□□□ -0.88
SDHB-205ENST00000475506 ATP9BO43861 1147 aa9.56□□□□□ -0.88
SDHB-205ENST00000475506 F12P00748 615 aaPredicted RBP9.56□□□□□ -0.88
SDHB-205ENST00000475506 EMP3P54852 163 aa9.56□□□□□ -0.88
SDHB-205ENST00000475506 EIF4G2P78344 907 aaKnown RBP eCLIP9.56□□□□□ -0.88
SDHB-205ENST00000475506 LRCH3Q96II8 777 aa9.56□□□□□ -0.88
SDHB-205ENST00000475506 TK2O00142 265 aa9.55□□□□□ -0.88
SDHB-205ENST00000475506 KANK4Q5T7N3 995 aaPredicted RBP9.55□□□□□ -0.88
SDHB-205ENST00000475506 MRPL50Q8N5N7 158 aaKnown RBP9.55□□□□□ -0.88
SDHB-205ENST00000475506 THAP11Q96EK4 314 aa9.55□□□□□ -0.88
SDHB-205ENST00000475506 USB1Q9BQ65 265 aaKnown RBP9.55□□□□□ -0.88
SDHB-205ENST00000475506 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.55□□□□□ -0.88
SDHB-205ENST00000475506 MAP10Q9P2G4 905 aa9.55□□□□□ -0.88
SDHB-205ENST00000475506 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
SDHB-205ENST00000475506 APLP1P51693 650 aa9.54□□□□□ -0.88
SDHB-205ENST00000475506 PNMA1Q8ND90 353 aa9.54□□□□□ -0.88
SDHB-205ENST00000475506 FKBPLQ9UIM3 349 aa9.54□□□□□ -0.88
SDHB-205ENST00000475506 ZBBXA8MT70 800 aa9.53□□□□□ -0.88
SDHB-205ENST00000475506 SCUBE3Q8IX30 993 aa9.53□□□□□ -0.88
SDHB-205ENST00000475506 VRTNQ9H8Y1 702 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms