RNA–Protein interactions for RNA: ENST00000474952.5

TFAP2A-210, Transcript of transcription factor AP-2 alpha, human

TSL 5

Gene TFAP2A, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFAP2A-210	ENST00000474952	FAM135B	Q49AJ0	1406 aa		33.73	■■■□□ 2.99
TFAP2A-210	ENST00000474952	WAPL	Q7Z5K2	1190 aa		33.72	■■■□□ 2.99
TFAP2A-210	ENST00000474952	CCDC184	Q52MB2	194 aa		33.71	■■■□□ 2.99
TFAP2A-210	ENST00000474952	SLC26A8	Q96RN1	970 aa		33.71	■■■□□ 2.99
TFAP2A-210	ENST00000474952	TBX22	Q9Y458	520 aa		33.71	■■■□□ 2.99
TFAP2A-210	ENST00000474952	PARD3	Q8TEW0	1356 aa		33.71	■■■□□ 2.99
TFAP2A-210	ENST00000474952	KNSTRN	Q9Y448	316 aa		33.71	■■■□□ 2.99
TFAP2A-210	ENST00000474952	CABP2	Q9NPB3	220 aa		33.68	■■■□□ 2.98
TFAP2A-210	ENST00000474952	MRS2	Q9HD23	443 aa		33.67	■■■□□ 2.98
TFAP2A-210	ENST00000474952	ANKLE2	Q86XL3	938 aa		33.66	■■■□□ 2.98
TFAP2A-210	ENST00000474952	TMC1	Q8TDI8	760 aa		33.66	■■■□□ 2.98
TFAP2A-210	ENST00000474952	PTPRU	Q92729	1446 aa		33.66	■■■□□ 2.98
TFAP2A-210	ENST00000474952	SRPK2	P78362	688 aa	Known RBP	33.65	■■■□□ 2.98
TFAP2A-210	ENST00000474952	CC2D1B	Q5T0F9	858 aa	Known RBP	33.65	■■■□□ 2.98
TFAP2A-210	ENST00000474952	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.65	■■■□□ 2.98
TFAP2A-210	ENST00000474952	SLC12A5	Q9H2X9	1139 aa		33.64	■■■□□ 2.98
TFAP2A-210	ENST00000474952	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.63	■■■□□ 2.97
TFAP2A-210	ENST00000474952	ROBO2	Q9HCK4	1378 aa		33.63	■■■□□ 2.97
TFAP2A-210	ENST00000474952	ATAD2	Q6PL18	1390 aa		33.62	■■■□□ 2.97
TFAP2A-210	ENST00000474952	CDK19	Q9BWU1	502 aa		33.61	■■■□□ 2.97
TFAP2A-210	ENST00000474952	CARD14	Q9BXL6	1004 aa		33.61	■■■□□ 2.97
TFAP2A-210	ENST00000474952	NPC1L1	Q9UHC9	1359 aa		33.61	■■■□□ 2.97
TFAP2A-210	ENST00000474952	NINL	Q9Y2I6	1382 aa		33.61	■■■□□ 2.97
TFAP2A-210	ENST00000474952	AMOTL2	Q9Y2J4	779 aa		33.57	■■■□□ 2.96
TFAP2A-210	ENST00000474952	XRN1	Q8IZH2	1706 aa	Known RBP	33.55	■■■□□ 2.96
TFAP2A-210	ENST00000474952	BRD4	O60885	1362 aa	Predicted RBP	33.55	■■■□□ 2.96
TFAP2A-210	ENST00000474952	ANKRD36B	Q8N2N9	1353 aa		33.55	■■■□□ 2.96
TFAP2A-210	ENST00000474952	PIK3R4	Q99570	1358 aa		33.55	■■■□□ 2.96
TFAP2A-210	ENST00000474952	PTCH1	Q13635	1447 aa		33.54	■■■□□ 2.96
TFAP2A-210	ENST00000474952	NSD3	Q9BZ95	1437 aa		33.53	■■■□□ 2.96
TFAP2A-210	ENST00000474952	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.52	■■■□□ 2.96
TFAP2A-210	ENST00000474952	WASL	O00401	505 aa	Predicted RBP	33.52	■■■□□ 2.96
TFAP2A-210	ENST00000474952	NLRP13	Q86W25	1043 aa		33.52	■■■□□ 2.96
TFAP2A-210	ENST00000474952	USP32	Q8NFA0	1604 aa		33.51	■■■□□ 2.96
TFAP2A-210	ENST00000474952	ADGRB2	O60241	1585 aa		33.51	■■■□□ 2.96
TFAP2A-210	ENST00000474952	NPHP4	O75161	1426 aa	Predicted RBP	33.48	■■■□□ 2.95
TFAP2A-210	ENST00000474952	FAM9B	Q8IZU0	186 aa		33.47	■■■□□ 2.95
TFAP2A-210	ENST00000474952	KDM4F	A0A1W2PPD8	638 aa		33.46	■■■□□ 2.95
TFAP2A-210	ENST00000474952	CHD2	O14647	1828 aa	Known RBP	33.45	■■■□□ 2.95
TFAP2A-210	ENST00000474952		A0A1W2PP64	1363 aa		33.45	■■■□□ 2.95
TFAP2A-210	ENST00000474952	CD163L1	Q9NR16	1453 aa		33.45	■■■□□ 2.95
TFAP2A-210	ENST00000474952	TERF2IP	Q9NYB0	399 aa		33.43	■■■□□ 2.94
TFAP2A-210	ENST00000474952	CABP1	Q9NZU7	370 aa		33.42	■■■□□ 2.94
TFAP2A-210	ENST00000474952	NCKAP5L	Q9HCH0	1330 aa		33.41	■■■□□ 2.94
TFAP2A-210	ENST00000474952	PNISR	Q8TF01	805 aa	Known RBP	33.41	■■■□□ 2.94
TFAP2A-210	ENST00000474952	KCNA6	P17658	529 aa		33.4	■■■□□ 2.94
TFAP2A-210	ENST00000474952	CGNL1	Q0VF96	1302 aa		33.39	■■■□□ 2.94
TFAP2A-210	ENST00000474952	PPP2R1A	P30153	589 aa		33.39	■■■□□ 2.94
TFAP2A-210	ENST00000474952	ATP7B	P35670	1465 aa		33.39	■■■□□ 2.94
TFAP2A-210	ENST00000474952	NUDT16	Q96DE0	195 aa	Known RBP	33.38	■■■□□ 2.93
TFAP2A-210	ENST00000474952	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.37	■■■□□ 2.93
TFAP2A-210	ENST00000474952	PPIP5K1	Q6PFW1	1433 aa		33.36	■■■□□ 2.93
TFAP2A-210	ENST00000474952	NSD2	O96028	1365 aa		33.34	■■■□□ 2.93
TFAP2A-210	ENST00000474952	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.34	■■■□□ 2.93
TFAP2A-210	ENST00000474952	PRR36	Q9H6K5	1346 aa		33.33	■■■□□ 2.93
TFAP2A-210	ENST00000474952	CCDC61	Q9Y6R9	512 aa		33.32	■■■□□ 2.92
TFAP2A-210	ENST00000474952	TOPAZ1	Q8N9V7	1692 aa		33.3	■■■□□ 2.92
TFAP2A-210	ENST00000474952	CDC42BPG	Q6DT37	1551 aa		33.3	■■■□□ 2.92
TFAP2A-210	ENST00000474952	MORC1	Q86VD1	984 aa		33.29	■■■□□ 2.92
TFAP2A-210	ENST00000474952	CPSF1	Q10570	1443 aa	Known RBP	33.29	■■■□□ 2.92
TFAP2A-210	ENST00000474952	ANKRD26	Q9UPS8	1709 aa		33.25	■■■□□ 2.91
TFAP2A-210	ENST00000474952	NWD1	Q149M9	1564 aa		33.25	■■■□□ 2.91
TFAP2A-210	ENST00000474952	ITSN1	Q15811	1721 aa		33.25	■■■□□ 2.91
TFAP2A-210	ENST00000474952	AKAP12	Q02952	1782 aa		33.25	■■■□□ 2.91
TFAP2A-210	ENST00000474952	KIF20B	Q96Q89	1820 aa		33.24	■■■□□ 2.91
TFAP2A-210	ENST00000474952	MON2	Q7Z3U7	1717 aa		33.23	■■■□□ 2.91
TFAP2A-210	ENST00000474952	NALCN	Q8IZF0	1738 aa		33.21	■■■□□ 2.91
TFAP2A-210	ENST00000474952	LMTK3	Q96Q04	1460 aa		33.21	■■■□□ 2.91
TFAP2A-210	ENST00000474952	FYB1	O15117	783 aa		33.2	■■■□□ 2.91
TFAP2A-210	ENST00000474952	HSPA2	P54652	639 aa		33.2	■■■□□ 2.91
TFAP2A-210	ENST00000474952	EDC4	Q6P2E9	1401 aa	Known RBP	33.2	■■■□□ 2.91
TFAP2A-210	ENST00000474952	FMN2	Q9NZ56	1722 aa		33.19	■■■□□ 2.9
TFAP2A-210	ENST00000474952	NUTM2F	A1L443	756 aa		33.19	■■■□□ 2.9
TFAP2A-210	ENST00000474952	PLEKHG3	A1L390	1219 aa		33.17	■■■□□ 2.9
TFAP2A-210	ENST00000474952	GGNBP2	Q9H3C7	697 aa		33.17	■■■□□ 2.9
TFAP2A-210	ENST00000474952	TNNT2	P45379	298 aa	Predicted RBP	33.16	■■■□□ 2.9
TFAP2A-210	ENST00000474952	ZNF692	Q9BU19	519 aa	Predicted RBP	33.16	■■■□□ 2.9
TFAP2A-210	ENST00000474952	RGPD8	O14715	1765 aa	Predicted RBP	33.16	■■■□□ 2.9
TFAP2A-210	ENST00000474952	NKTR	P30414	1462 aa	Known RBP	33.15	■■■□□ 2.9
TFAP2A-210	ENST00000474952	ANKAR	Q7Z5J8	1434 aa		33.15	■■■□□ 2.9
TFAP2A-210	ENST00000474952	INSR	P06213	1382 aa		33.14	■■■□□ 2.9
TFAP2A-210	ENST00000474952	ZBED9	Q6R2W3	1325 aa		33.13	■■■□□ 2.89
TFAP2A-210	ENST00000474952	ADGRL3	Q9HAR2	1447 aa		33.13	■■■□□ 2.89
TFAP2A-210	ENST00000474952	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.13	■■■□□ 2.89
TFAP2A-210	ENST00000474952	ACE	P12821	1306 aa		33.11	■■■□□ 2.89
TFAP2A-210	ENST00000474952	POLR3A	O14802	1390 aa	Predicted RBP	33.11	■■■□□ 2.89
TFAP2A-210	ENST00000474952	RBM33	Q96EV2	1170 aa	Known RBP	33.1	■■■□□ 2.89
TFAP2A-210	ENST00000474952	NRK	Q7Z2Y5	1582 aa		33.09	■■■□□ 2.89
TFAP2A-210	ENST00000474952	BLM	P54132	1417 aa	Predicted RBP	33.07	■■■□□ 2.88
TFAP2A-210	ENST00000474952	STRC	Q7RTU9	1775 aa		33.07	■■■□□ 2.88
TFAP2A-210	ENST00000474952	WDR43	Q15061	677 aa	Known RBP eCLIP	33.07	■■■□□ 2.88
TFAP2A-210	ENST00000474952	MTHFS	P49914	203 aa		33.05	■■■□□ 2.88
TFAP2A-210	ENST00000474952	USP6	P35125	1406 aa		33.04	■■■□□ 2.88
TFAP2A-210	ENST00000474952	ADAMTS8	Q9UP79	889 aa		33.04	■■■□□ 2.88
TFAP2A-210	ENST00000474952	STRCP1	A6NGW2	1772 aa		33.03	■■■□□ 2.88
TFAP2A-210	ENST00000474952	PROSER2	Q86WR7	435 aa	Predicted RBP	33.03	■■■□□ 2.88
TFAP2A-210	ENST00000474952	NME9	Q86XW9	330 aa		33.03	■■■□□ 2.88
TFAP2A-210	ENST00000474952	PMFBP1	Q8TBY8	1022 aa		33.02	■■■□□ 2.88
TFAP2A-210	ENST00000474952	SHPRH	Q149N8	1683 aa		33	■■■□□ 2.87
TFAP2A-210	ENST00000474952	TTC21B	Q7Z4L5	1316 aa		33	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms