RNA–Protein interactions for RNA: ENST00000474172.1

SETX-204, Transcript of senataxin, humanhuman

TSL 3

Gene SETX, Length 719 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-204ENST00000474172 HDGFP51858 240 aaKnown RBP13.84□□□□□ -0.19
SETX-204ENST00000474172 CC2D1BQ5T0F9 858 aaKnown RBP13.83□□□□□ -0.2
SETX-204ENST00000474172 POGKQ9P215 609 aa13.83□□□□□ -0.2
SETX-204ENST00000474172 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.83□□□□□ -0.2
SETX-204ENST00000474172 AMER1Q5JTC6 1135 aaPredicted RBP13.82□□□□□ -0.2
SETX-204ENST00000474172 EID1Q9Y6B2 187 aa13.82□□□□□ -0.2
SETX-204ENST00000474172 TECPR2O15040 1411 aa13.81□□□□□ -0.2
SETX-204ENST00000474172 CPS1P31327 1500 aa13.81□□□□□ -0.2
SETX-204ENST00000474172 CDCA8Q53HL2 280 aa13.81□□□□□ -0.2
SETX-204ENST00000474172 CDK19Q9BWU1 502 aa13.81□□□□□ -0.2
SETX-204ENST00000474172 PARD3Q8TEW0 1356 aa13.81□□□□□ -0.2
SETX-204ENST00000474172 TBX22Q9Y458 520 aa13.8□□□□□ -0.2
SETX-204ENST00000474172 EVC2Q86UK5 1308 aa13.8□□□□□ -0.2
SETX-204ENST00000474172 TMC1Q8TDI8 760 aa13.79□□□□□ -0.2
SETX-204ENST00000474172 NCKAP5LQ9HCH0 1330 aa13.79□□□□□ -0.2
SETX-204ENST00000474172 SIRT1Q96EB6 747 aa13.78□□□□□ -0.2
SETX-204ENST00000474172 AMOTL2Q9Y2J4 779 aa13.78□□□□□ -0.2
SETX-204ENST00000474172 CD163L1Q9NR16 1453 aa13.78□□□□□ -0.2
SETX-204ENST00000474172 FAM135BQ49AJ0 1406 aa13.77□□□□□ -0.21
SETX-204ENST00000474172 XRN1Q8IZH2 1706 aaKnown RBP13.77□□□□□ -0.21
SETX-204ENST00000474172 MRS2Q9HD23 443 aa13.77□□□□□ -0.21
SETX-204ENST00000474172 SRPK2P78362 688 aaKnown RBP13.76□□□□□ -0.21
SETX-204ENST00000474172 ANKLE2Q86XL3 938 aa13.76□□□□□ -0.21
SETX-204ENST00000474172 PUS7Q96PZ0 661 aaKnown RBP13.76□□□□□ -0.21
SETX-204ENST00000474172 KTN1Q86UP2 1357 aaKnown RBP13.75□□□□□ -0.21
SETX-204ENST00000474172 PRR36Q9H6K5 1346 aa13.75□□□□□ -0.21
SETX-204ENST00000474172 CHD2O14647 1828 aaKnown RBP13.75□□□□□ -0.21
SETX-204ENST00000474172 DIP2AQ14689 1571 aa13.75□□□□□ -0.21
SETX-204ENST00000474172 NSD3Q9BZ95 1437 aa13.74□□□□□ -0.21
SETX-204ENST00000474172 MYBBP1AQ9BQG0 1328 aaKnown RBP13.74□□□□□ -0.21
SETX-204ENST00000474172 WASLO00401 505 aaPredicted RBP13.74□□□□□ -0.21
SETX-204ENST00000474172 SLC24A1O60721 1099 aa13.74□□□□□ -0.21
SETX-204ENST00000474172 KCNA6P17658 529 aa13.74□□□□□ -0.21
SETX-204ENST00000474172 RALBP1Q15311 655 aa13.74□□□□□ -0.21
SETX-204ENST00000474172 KNSTRNQ9Y448 316 aa13.74□□□□□ -0.21
SETX-204ENST00000474172 FAM9BQ8IZU0 186 aa13.73□□□□□ -0.21
SETX-204ENST00000474172 RBM33Q96EV2 1170 aaKnown RBP13.73□□□□□ -0.21
SETX-204ENST00000474172 CABP1Q9NZU7 370 aa13.73□□□□□ -0.21
SETX-204ENST00000474172 A0A1W2PP64 1363 aa13.72□□□□□ -0.21
SETX-204ENST00000474172 HSPA2P54652 639 aa13.72□□□□□ -0.21
SETX-204ENST00000474172 PNISRQ8TF01 805 aaKnown RBP13.72□□□□□ -0.21
SETX-204ENST00000474172 NPHP4O75161 1426 aaPredicted RBP13.72□□□□□ -0.21
SETX-204ENST00000474172 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.21
SETX-204ENST00000474172 SENP3-EIF4A1A0A087X0R7 540 aa13.71□□□□□ -0.21
SETX-204ENST00000474172 PPP2R1AP30153 589 aa13.71□□□□□ -0.21
SETX-204ENST00000474172 USP32Q8NFA0 1604 aa13.71□□□□□ -0.22
SETX-204ENST00000474172 RGPD8O14715 1765 aaPredicted RBP13.71□□□□□ -0.22
SETX-204ENST00000474172 ADGRB2O60241 1585 aa13.71□□□□□ -0.22
SETX-204ENST00000474172 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.22
SETX-204ENST00000474172 NUDT16Q96DE0 195 aaKnown RBP13.7□□□□□ -0.22
SETX-204ENST00000474172 NUTM2FA1L443 756 aa13.69□□□□□ -0.22
SETX-204ENST00000474172 PTCH1Q13635 1447 aa13.69□□□□□ -0.22
SETX-204ENST00000474172 BRD4O60885 1362 aaPredicted RBP13.69□□□□□ -0.22
SETX-204ENST00000474172 ATAD2Q6PL18 1390 aa13.69□□□□□ -0.22
SETX-204ENST00000474172 ATP7BP35670 1465 aa13.68□□□□□ -0.22
SETX-204ENST00000474172 STRCP1A6NGW2 1772 aa13.68□□□□□ -0.22
SETX-204ENST00000474172 TOPAZ1Q8N9V7 1692 aa13.67□□□□□ -0.22
SETX-204ENST00000474172 NLRP13Q86W25 1043 aa13.67□□□□□ -0.22
SETX-204ENST00000474172 PIK3R4Q99570 1358 aa13.67□□□□□ -0.22
SETX-204ENST00000474172 PPIP5K1Q6PFW1 1433 aa13.66□□□□□ -0.22
SETX-204ENST00000474172 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
SETX-204ENST00000474172 NALCNQ8IZF0 1738 aa13.66□□□□□ -0.22
SETX-204ENST00000474172 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
SETX-204ENST00000474172 LMTK3Q96Q04 1460 aa13.66□□□□□ -0.22
SETX-204ENST00000474172 AKAP12Q02952 1782 aa13.66□□□□□ -0.22
SETX-204ENST00000474172 STRCQ7RTU9 1775 aa13.66□□□□□ -0.22
SETX-204ENST00000474172 CPSF1Q10570 1443 aaKnown RBP13.65□□□□□ -0.22
SETX-204ENST00000474172 CENPBP07199 599 aaPredicted RBP13.65□□□□□ -0.22
SETX-204ENST00000474172 CDC42BPGQ6DT37 1551 aa13.64□□□□□ -0.23
SETX-204ENST00000474172 NINLQ9Y2I6 1382 aa13.64□□□□□ -0.23
SETX-204ENST00000474172 FYB1O15117 783 aa13.64□□□□□ -0.23
SETX-204ENST00000474172 TNNT2P45379 298 aaPredicted RBP13.64□□□□□ -0.23
SETX-204ENST00000474172 HNRNPUQ00839 825 aaKnown RBP eCLIP13.64□□□□□ -0.23
SETX-204ENST00000474172 GGNBP2Q9H3C7 697 aa13.64□□□□□ -0.23
SETX-204ENST00000474172 FBLN1P23142 703 aa13.63□□□□□ -0.23
SETX-204ENST00000474172 MON2Q7Z3U7 1717 aa13.63□□□□□ -0.23
SETX-204ENST00000474172 NWD1Q149M9 1564 aa13.62□□□□□ -0.23
SETX-204ENST00000474172 KIF20BQ96Q89 1820 aa13.62□□□□□ -0.23
SETX-204ENST00000474172 FMN2Q9NZ56 1722 aa13.62□□□□□ -0.23
SETX-204ENST00000474172 ANKRD26Q9UPS8 1709 aa13.62□□□□□ -0.23
SETX-204ENST00000474172 MORC1Q86VD1 984 aa13.62□□□□□ -0.23
SETX-204ENST00000474172 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
SETX-204ENST00000474172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.61□□□□□ -0.23
SETX-204ENST00000474172 TERF2IPQ9NYB0 399 aa13.61□□□□□ -0.23
SETX-204ENST00000474172 ITSN1Q15811 1721 aa13.61□□□□□ -0.23
SETX-204ENST00000474172 CGNL1Q0VF96 1302 aa13.61□□□□□ -0.23
SETX-204ENST00000474172 PLEKHG3A1L390 1219 aa13.6□□□□□ -0.23
SETX-204ENST00000474172 HDGFL2Q7Z4V5 671 aaPredicted RBP13.6□□□□□ -0.23
SETX-204ENST00000474172 NME9Q86XW9 330 aa13.6□□□□□ -0.23
SETX-204ENST00000474172 ACEP12821 1306 aa13.6□□□□□ -0.23
SETX-204ENST00000474172 PMFBP1Q8TBY8 1022 aa13.59□□□□□ -0.23
SETX-204ENST00000474172 SHPRHQ149N8 1683 aa13.59□□□□□ -0.23
SETX-204ENST00000474172 SCAF1Q9H7N4 1312 aaKnown RBP13.59□□□□□ -0.23
SETX-204ENST00000474172 NRKQ7Z2Y5 1582 aa13.58□□□□□ -0.23
SETX-204ENST00000474172 ADAMTS8Q9UP79 889 aa13.58□□□□□ -0.24
SETX-204ENST00000474172 SSH2Q76I76 1423 aa13.56□□□□□ -0.24
SETX-204ENST00000474172 MTHFSP49914 203 aa13.56□□□□□ -0.24
SETX-204ENST00000474172 EDC4Q6P2E9 1401 aaKnown RBP13.56□□□□□ -0.24
SETX-204ENST00000474172 ADGRL3Q9HAR2 1447 aa13.56□□□□□ -0.24
SETX-204ENST00000474172 PROSER2Q86WR7 435 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms