RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
SEC22A-204ENST00000473494 ARID3CA6NKF2 412 aa12.05□□□□□ -0.48
SEC22A-204ENST00000473494 ACTN4O43707 911 aaKnown RBP12.04□□□□□ -0.48
SEC22A-204ENST00000473494 ANKK1Q8NFD2 765 aa12.04□□□□□ -0.48
SEC22A-204ENST00000473494 PRR14Q9BWN1 585 aa12.04□□□□□ -0.48
SEC22A-204ENST00000473494 MORN1Q5T089 497 aa12.02□□□□□ -0.49
SEC22A-204ENST00000473494 HELBQ8NG08 1087 aaPredicted RBP12.02□□□□□ -0.49
SEC22A-204ENST00000473494 SOWAHBA6NEL2 793 aa12.01□□□□□ -0.49
SEC22A-204ENST00000473494 GJD4Q96KN9 370 aaPredicted RBP12.01□□□□□ -0.49
SEC22A-204ENST00000473494 CFAP99D6REC4 459 aa12□□□□□ -0.49
SEC22A-204ENST00000473494 C6orf229H3BNL8 230 aa11.99□□□□□ -0.49
SEC22A-204ENST00000473494 GDPD2Q9HCC8 539 aa11.99□□□□□ -0.49
SEC22A-204ENST00000473494 PRM3Q9NNZ6 103 aa11.98□□□□□ -0.49
SEC22A-204ENST00000473494 TBC1D2BQ9UPU7 963 aa11.98□□□□□ -0.49
SEC22A-204ENST00000473494 CTDSPL2Q05D32 466 aa11.97□□□□□ -0.49
SEC22A-204ENST00000473494 RETREG3Q86VR2 466 aa11.97□□□□□ -0.49
SEC22A-204ENST00000473494 CCDC82Q8N4S0 544 aa11.97□□□□□ -0.49
SEC22A-204ENST00000473494 HMX1Q9NP08 348 aaPredicted RBP11.97□□□□□ -0.49
SEC22A-204ENST00000473494 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.49
SEC22A-204ENST00000473494 BCAMP50895 628 aa11.96□□□□□ -0.49
SEC22A-204ENST00000473494 Q3C1V9 767 aa11.96□□□□□ -0.49
SEC22A-204ENST00000473494 ANKRD13DQ6ZTN6 518 aa11.96□□□□□ -0.49
SEC22A-204ENST00000473494 HPS5Q9UPZ3 1129 aa11.96□□□□□ -0.49
SEC22A-204ENST00000473494 SLC27A5Q9Y2P5 690 aa11.96□□□□□ -0.49
SEC22A-204ENST00000473494 NDUFB9Q9Y6M9 179 aa11.96□□□□□ -0.49
SEC22A-204ENST00000473494 GPR37L1O60883 481 aa11.95□□□□□ -0.5
SEC22A-204ENST00000473494 PUS10Q3MIT2 529 aaKnown RBP11.95□□□□□ -0.5
SEC22A-204ENST00000473494 TRIM34Q9BYJ4 488 aa11.95□□□□□ -0.5
SEC22A-204ENST00000473494 TSR3Q9UJK0 312 aaKnown RBP11.95□□□□□ -0.5
SEC22A-204ENST00000473494 APLP1P51693 650 aa11.94□□□□□ -0.5
SEC22A-204ENST00000473494 PRR7Q8TB68 274 aa11.94□□□□□ -0.5
SEC22A-204ENST00000473494 SYMPKQ92797 1274 aaKnown RBP11.94□□□□□ -0.5
SEC22A-204ENST00000473494 WNT2BQ93097 391 aa11.94□□□□□ -0.5
SEC22A-204ENST00000473494 STAC3Q96MF2 364 aa11.94□□□□□ -0.5
SEC22A-204ENST00000473494 KRTAP3-3Q9BYR6 98 aa11.94□□□□□ -0.5
SEC22A-204ENST00000473494 KRTAP3-2Q9BYR7 98 aa11.94□□□□□ -0.5
SEC22A-204ENST00000473494 PPP4CP60510 307 aa11.93□□□□□ -0.5
SEC22A-204ENST00000473494 DESI1Q6ICB0 168 aa11.93□□□□□ -0.5
SEC22A-204ENST00000473494 WWC1Q8IX03 1113 aa11.93□□□□□ -0.5
SEC22A-204ENST00000473494 ARID3AQ99856 593 aa11.93□□□□□ -0.5
SEC22A-204ENST00000473494 PLSCR2Q9NRY7 297 aa11.93□□□□□ -0.5
SEC22A-204ENST00000473494 ABL2P42684 1182 aa11.92□□□□□ -0.5
SEC22A-204ENST00000473494 LRRN4Q8WUT4 740 aa11.92□□□□□ -0.5
SEC22A-204ENST00000473494 TSC1Q92574 1164 aa11.92□□□□□ -0.5
SEC22A-204ENST00000473494 ZNF777Q9ULD5 760 aaPredicted RBP11.92□□□□□ -0.5
SEC22A-204ENST00000473494 ZNF330Q9Y3S2 320 aaPredicted RBP11.92□□□□□ -0.5
SEC22A-204ENST00000473494 SALL2Q9Y467 1007 aaPredicted RBP11.92□□□□□ -0.5
SEC22A-204ENST00000473494 RNF19BQ6ZMZ0 732 aa11.9□□□□□ -0.5
SEC22A-204ENST00000473494 IRF5Q13568 498 aa11.89□□□□□ -0.51
SEC22A-204ENST00000473494 BLOC1S3Q6QNY0 202 aa11.89□□□□□ -0.51
SEC22A-204ENST00000473494 PCDHB3Q9Y5E6 796 aa11.89□□□□□ -0.51
SEC22A-204ENST00000473494 BRICD5Q6PL45 260 aa11.87□□□□□ -0.51
SEC22A-204ENST00000473494 THSD4Q6ZMP0 1018 aa11.87□□□□□ -0.51
SEC22A-204ENST00000473494 THAP11Q96EK4 314 aa11.87□□□□□ -0.51
SEC22A-204ENST00000473494 PER1O15534 1290 aaPredicted RBP11.86□□□□□ -0.51
SEC22A-204ENST00000473494 NR1I2O75469 434 aa11.86□□□□□ -0.51
SEC22A-204ENST00000473494 CCDC97Q96F63 343 aaPredicted RBP11.86□□□□□ -0.51
SEC22A-204ENST00000473494 USB1Q9BQ65 265 aaKnown RBP11.86□□□□□ -0.51
SEC22A-204ENST00000473494 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
SEC22A-204ENST00000473494 WBP1LQ9NX94 342 aa11.85□□□□□ -0.51
SEC22A-204ENST00000473494 POM121CA8CG34 1229 aa11.84□□□□□ -0.51
SEC22A-204ENST00000473494 LYPD8Q6UX82 237 aa11.84□□□□□ -0.51
SEC22A-204ENST00000473494 SCUBE3Q8IX30 993 aa11.84□□□□□ -0.51
SEC22A-204ENST00000473494 EPS8L1Q8TE68 723 aa11.84□□□□□ -0.51
SEC22A-204ENST00000473494 FMNL1O95466 1100 aaPredicted RBP11.83□□□□□ -0.52
SEC22A-204ENST00000473494 WASHC4Q2M389 1173 aa11.83□□□□□ -0.52
SEC22A-204ENST00000473494 GLMNQ92990 594 aa11.82□□□□□ -0.52
SEC22A-204ENST00000473494 MSS51Q4VC12 460 aa11.81□□□□□ -0.52
SEC22A-204ENST00000473494 NYAP1Q6ZVC0 841 aa11.81□□□□□ -0.52
SEC22A-204ENST00000473494 JUNDP17535 347 aa11.8□□□□□ -0.52
SEC22A-204ENST00000473494 NR6A1Q15406 480 aa11.8□□□□□ -0.52
SEC22A-204ENST00000473494 F12P00748 615 aaPredicted RBP11.79□□□□□ -0.52
SEC22A-204ENST00000473494 PTPRNQ16849 979 aa11.79□□□□□ -0.52
SEC22A-204ENST00000473494 CALR3Q96L12 384 aaKnown RBP11.78□□□□□ -0.52
SEC22A-204ENST00000473494 ADAMTS19Q8TE59 1207 aa11.77□□□□□ -0.53
SEC22A-204ENST00000473494 KCTD12Q96CX2 325 aaKnown RBP11.77□□□□□ -0.53
SEC22A-204ENST00000473494 PNMA1Q8ND90 353 aa11.76□□□□□ -0.53
SEC22A-204ENST00000473494 DXOO77932 396 aaKnown RBP11.75□□□□□ -0.53
SEC22A-204ENST00000473494 VAC14Q08AM6 782 aa11.74□□□□□ -0.53
SEC22A-204ENST00000473494 SPSB2Q99619 263 aa11.74□□□□□ -0.53
SEC22A-204ENST00000473494 ZC3H4Q9UPT8 1303 aaKnown RBP11.74□□□□□ -0.53
SEC22A-204ENST00000473494 POTEMA6NI47 508 aa11.73□□□□□ -0.53
SEC22A-204ENST00000473494 SOX11P35716 441 aa11.73□□□□□ -0.53
SEC22A-204ENST00000473494 MMP16P51512 607 aa11.73□□□□□ -0.53
SEC22A-204ENST00000473494 COPS2P61201 443 aa11.73□□□□□ -0.53
SEC22A-204ENST00000473494 FAM160A2Q8N612 972 aaPredicted RBP11.72□□□□□ -0.53
SEC22A-204ENST00000473494 MAP10Q9P2G4 905 aa11.72□□□□□ -0.53
SEC22A-204ENST00000473494 TLL1O43897 1013 aa11.71□□□□□ -0.53
SEC22A-204ENST00000473494 ADH1BP00325 375 aa11.71□□□□□ -0.53
SEC22A-204ENST00000473494 CCNYL3P0C7X3 344 aa11.71□□□□□ -0.53
SEC22A-204ENST00000473494 ALG2Q9H553 416 aa11.71□□□□□ -0.53
SEC22A-204ENST00000473494 PRDM9Q9NQV7 894 aa11.71□□□□□ -0.53
SEC22A-204ENST00000473494 FKBPLQ9UIM3 349 aa11.71□□□□□ -0.53
SEC22A-204ENST00000473494 ZPR1O75312 459 aa11.7□□□□□ -0.54
SEC22A-204ENST00000473494 MTRQ99707 1265 aa11.7□□□□□ -0.54
SEC22A-204ENST00000473494 HDGFL1Q5TGJ6 251 aa11.69□□□□□ -0.54
SEC22A-204ENST00000473494 CDAN1Q8IWY9 1227 aa11.69□□□□□ -0.54
SEC22A-204ENST00000473494 NUDT12Q9BQG2 462 aa11.69□□□□□ -0.54
SEC22A-204ENST00000473494 POTEGQ6S5H5 508 aa11.68□□□□□ -0.54
SEC22A-204ENST00000473494 NR1H3Q13133 447 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms