RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SPTLC1O15269 473 aa4.22□□□□□ -1.73
XRN1-210ENST00000472697 ZNF16P17020 682 aaPredicted RBP4.22□□□□□ -1.73
XRN1-210ENST00000472697 CRTC2Q53ET0 693 aaPredicted RBP4.22□□□□□ -1.73
XRN1-210ENST00000472697 CAPN12Q6ZSI9 719 aa4.22□□□□□ -1.73
XRN1-210ENST00000472697 SMARCA5O60264 1052 aaPredicted RBP4.22□□□□□ -1.73
XRN1-210ENST00000472697 KCNA1Q09470 495 aa4.22□□□□□ -1.73
XRN1-210ENST00000472697 MTMR3Q13615 1198 aa4.22□□□□□ -1.73
XRN1-210ENST00000472697 NR6A1Q15406 480 aa4.22□□□□□ -1.73
XRN1-210ENST00000472697 ANO2Q9NQ90 1003 aa4.22□□□□□ -1.73
XRN1-210ENST00000472697 KDM4FA0A1W2PPD8 638 aa4.21□□□□□ -1.73
XRN1-210ENST00000472697 TMEM259Q4ZIN3 620 aa4.21□□□□□ -1.73
XRN1-210ENST00000472697 C9orf131Q5VYM1 1079 aa4.21□□□□□ -1.73
XRN1-210ENST00000472697 CDCA7LQ96GN5 454 aa4.21□□□□□ -1.73
XRN1-210ENST00000472697 CCDC180Q9P1Z9 1646 aa4.21□□□□□ -1.74
XRN1-210ENST00000472697 RGS20O76081 388 aa4.21□□□□□ -1.74
XRN1-210ENST00000472697 KANK4Q5T7N3 995 aaPredicted RBP4.21□□□□□ -1.74
XRN1-210ENST00000472697 RNF19AQ9NV58 838 aa4.21□□□□□ -1.74
XRN1-210ENST00000472697 PPP1R1BQ9UD71 204 aaPredicted RBP4.21□□□□□ -1.74
XRN1-210ENST00000472697 PHF14O94880 888 aa4.2□□□□□ -1.74
XRN1-210ENST00000472697 KCNH2Q12809 1159 aa4.2□□□□□ -1.74
XRN1-210ENST00000472697 TTC13Q8NBP0 860 aa4.2□□□□□ -1.74
XRN1-210ENST00000472697 GIPC2Q8TF65 315 aa4.2□□□□□ -1.74
XRN1-210ENST00000472697 TSGA10IPQ3SY00 556 aa4.2□□□□□ -1.74
XRN1-210ENST00000472697 C3orf67Q6ZVT6 689 aa4.2□□□□□ -1.74
XRN1-210ENST00000472697 FAM174AQ8TBP5 190 aa4.2□□□□□ -1.74
XRN1-210ENST00000472697 NUDT7P0C024 238 aa4.19□□□□□ -1.74
XRN1-210ENST00000472697 CDK11BP21127 795 aaKnown RBP4.19□□□□□ -1.74
XRN1-210ENST00000472697 FAM69CQ0P6D2 419 aa4.19□□□□□ -1.74
XRN1-210ENST00000472697 NUDT18Q6ZVK8 323 aa4.19□□□□□ -1.74
XRN1-210ENST00000472697 EYA1Q99502 592 aa4.19□□□□□ -1.74
XRN1-210ENST00000472697 CDK11AQ9UQ88 783 aaPredicted RBP4.19□□□□□ -1.74
XRN1-210ENST00000472697 USTQ9Y2C2 406 aa4.19□□□□□ -1.74
XRN1-210ENST00000472697 SLC10A3P09131 477 aa4.19□□□□□ -1.74
XRN1-210ENST00000472697 PROX2Q3B8N5 592 aa4.19□□□□□ -1.74
XRN1-210ENST00000472697 DHX37Q8IY37 1157 aaKnown RBP4.19□□□□□ -1.74
XRN1-210ENST00000472697 AMOTL2Q9Y2J4 779 aa4.19□□□□□ -1.74
XRN1-210ENST00000472697 ZNF454Q8N9F8 522 aa4.18□□□□□ -1.74
XRN1-210ENST00000472697 NDUFB9Q9Y6M9 179 aa4.18□□□□□ -1.74
XRN1-210ENST00000472697 RBM47A0AV96 593 aaKnown RBP4.18□□□□□ -1.74
XRN1-210ENST00000472697 OATP04181 439 aa4.18□□□□□ -1.74
XRN1-210ENST00000472697 FOSBP53539 338 aa4.18□□□□□ -1.74
XRN1-210ENST00000472697 ZNF662Q6ZS27 426 aa4.18□□□□□ -1.74
XRN1-210ENST00000472697 NUTM1Q86Y26 1132 aa4.18□□□□□ -1.74
XRN1-210ENST00000472697 HOXA2O43364 376 aa4.17□□□□□ -1.74
XRN1-210ENST00000472697 ATG7O95352 703 aa4.17□□□□□ -1.74
XRN1-210ENST00000472697 ZNF211Q13398 564 aaPredicted RBP4.17□□□□□ -1.74
XRN1-210ENST00000472697 FAM161BQ96MY7 647 aa4.17□□□□□ -1.74
XRN1-210ENST00000472697 PUS7Q96PZ0 661 aaKnown RBP4.17□□□□□ -1.74
XRN1-210ENST00000472697 PCDHGA4Q9Y5G9 962 aa4.17□□□□□ -1.74
XRN1-210ENST00000472697 ABCC9O60706 1549 aa4.17□□□□□ -1.74
XRN1-210ENST00000472697 POTEB3A0JP26 581 aa4.17□□□□□ -1.74
XRN1-210ENST00000472697 FBXO45P0C2W1 286 aa4.17□□□□□ -1.74
XRN1-210ENST00000472697 PRSS12P56730 875 aa4.17□□□□□ -1.74
XRN1-210ENST00000472697 POTEBQ6S5H4 581 aa4.17□□□□□ -1.74
XRN1-210ENST00000472697 RDH13Q8NBN7 331 aa4.17□□□□□ -1.74
XRN1-210ENST00000472697 MARVELD3Q96A59 401 aa4.17□□□□□ -1.74
XRN1-210ENST00000472697 FDX1P10109 184 aa4.16□□□□□ -1.74
XRN1-210ENST00000472697 TYW1BQ6NUM6 668 aa4.16□□□□□ -1.74
XRN1-210ENST00000472697 ZNF594Q96JF6 807 aaPredicted RBP4.16□□□□□ -1.74
XRN1-210ENST00000472697 BCL2L13Q9BXK5 485 aa4.16□□□□□ -1.74
XRN1-210ENST00000472697 KDM4AO75164 1064 aa4.16□□□□□ -1.74
XRN1-210ENST00000472697 HSP90B1P14625 803 aaKnown RBP4.16□□□□□ -1.74
XRN1-210ENST00000472697 HOXB3P14651 431 aaPredicted RBP4.16□□□□□ -1.74
XRN1-210ENST00000472697 EMP3P54852 163 aa4.16□□□□□ -1.74
XRN1-210ENST00000472697 FUT2Q10981 343 aa4.16□□□□□ -1.74
XRN1-210ENST00000472697 NOVA2Q9UNW9 492 aaKnown RBP4.16□□□□□ -1.74
XRN1-210ENST00000472697 GNEQ9Y223 722 aaKnown RBP4.16□□□□□ -1.74
XRN1-210ENST00000472697 ANKRD33BA6NCL7 494 aa4.15□□□□□ -1.74
XRN1-210ENST00000472697 RECKO95980 971 aa4.15□□□□□ -1.74
XRN1-210ENST00000472697 SSFA2P28290 1259 aa4.15□□□□□ -1.74
XRN1-210ENST00000472697 NPAS4Q8IUM7 802 aa4.15□□□□□ -1.74
XRN1-210ENST00000472697 PURBQ96QR8 312 aaKnown RBP4.15□□□□□ -1.74
XRN1-210ENST00000472697 KIAA1024Q9UPX6 916 aa4.15□□□□□ -1.74
XRN1-210ENST00000472697 PPP1R3GB7ZBB8 358 aa4.15□□□□□ -1.75
XRN1-210ENST00000472697 EIF5BO60841 1220 aaKnown RBP4.15□□□□□ -1.75
XRN1-210ENST00000472697 GIMAP6Q6P9H5 292 aa4.15□□□□□ -1.75
XRN1-210ENST00000472697 HS3ST6Q96QI5 342 aa4.15□□□□□ -1.75
XRN1-210ENST00000472697 KRTAP3-3Q9BYR6 98 aa4.15□□□□□ -1.75
XRN1-210ENST00000472697 KRTAP3-2Q9BYR7 98 aa4.15□□□□□ -1.75
XRN1-210ENST00000472697 USP17L3A6NCW0 530 aa4.14□□□□□ -1.75
XRN1-210ENST00000472697 USP17L4A6NCW7 530 aa4.14□□□□□ -1.75
XRN1-210ENST00000472697 PPM1GO15355 546 aaPredicted RBP4.14□□□□□ -1.75
XRN1-210ENST00000472697 TCF3P15923 654 aa4.14□□□□□ -1.75
XRN1-210ENST00000472697 PUS10Q3MIT2 529 aaKnown RBP4.14□□□□□ -1.75
XRN1-210ENST00000472697 ARSIQ5FYB1 569 aa4.14□□□□□ -1.75
XRN1-210ENST00000472697 USP17L2Q6R6M4 530 aa4.14□□□□□ -1.75
XRN1-210ENST00000472697 USP17L1Q7RTZ2 530 aa4.14□□□□□ -1.75
XRN1-210ENST00000472697 SIRT1Q96EB6 747 aa4.14□□□□□ -1.75
XRN1-210ENST00000472697 JPH4Q96JJ6 628 aa4.14□□□□□ -1.75
XRN1-210ENST00000472697 TMEM134Q9H6X4 195 aa4.14□□□□□ -1.75
XRN1-210ENST00000472697 HOXB1P14653 301 aaPredicted RBP4.14□□□□□ -1.75
XRN1-210ENST00000472697 NCOA4Q13772 614 aa4.14□□□□□ -1.75
XRN1-210ENST00000472697 EPAS1Q99814 870 aa4.14□□□□□ -1.75
XRN1-210ENST00000472697 SOWAHDA6NJG2 315 aa4.13□□□□□ -1.75
XRN1-210ENST00000472697 ATP9BO43861 1147 aa4.13□□□□□ -1.75
XRN1-210ENST00000472697 CLDN10P78369 228 aa4.13□□□□□ -1.75
XRN1-210ENST00000472697 ECM1Q16610 540 aa4.13□□□□□ -1.75
XRN1-210ENST00000472697 LDLRAD1Q5T700 205 aa4.13□□□□□ -1.75
XRN1-210ENST00000472697 ZDHHC16Q969W1 377 aa4.13□□□□□ -1.75
XRN1-210ENST00000472697 SEPT3Q9UH03 358 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms