RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 CHD1O14646 1710 aa12.85□□□□□ -0.35
SCAF4-205ENST00000472318 MDM2Q00987 491 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-205ENST00000472318 ANKLE1Q8NAG6 615 aa12.83□□□□□ -0.36
SCAF4-205ENST00000472318 THAP11Q96EK4 314 aa12.82□□□□□ -0.36
SCAF4-205ENST00000472318 SPSB2Q99619 263 aa12.82□□□□□ -0.36
SCAF4-205ENST00000472318 LAPTM4AQ15012 233 aa12.81□□□□□ -0.36
SCAF4-205ENST00000472318 EMID1Q96A84 441 aaPredicted RBP12.81□□□□□ -0.36
SCAF4-205ENST00000472318 SLC6A16Q9GZN6 736 aa12.81□□□□□ -0.36
SCAF4-205ENST00000472318 WIZO95785 1651 aa12.8□□□□□ -0.36
SCAF4-205ENST00000472318 ZMYND10O75800 440 aa12.8□□□□□ -0.36
SCAF4-205ENST00000472318 SLC27A5Q9Y2P5 690 aa12.8□□□□□ -0.36
SCAF4-205ENST00000472318 BARGINQ6ZT62 677 aa12.79□□□□□ -0.36
SCAF4-205ENST00000472318 ZC3H15Q8WU90 426 aaKnown RBP12.79□□□□□ -0.36
SCAF4-205ENST00000472318 GPCPD1Q9NPB8 672 aa12.79□□□□□ -0.36
SCAF4-205ENST00000472318 SALL2Q9Y467 1007 aaPredicted RBP12.79□□□□□ -0.36
SCAF4-205ENST00000472318 PPEF1O14829 653 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-205ENST00000472318 CLCN1P35523 988 aa12.78□□□□□ -0.36
SCAF4-205ENST00000472318 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
SCAF4-205ENST00000472318 TOPBP1Q92547 1522 aa12.78□□□□□ -0.36
SCAF4-205ENST00000472318 GRIPAP1Q4V328 841 aa12.77□□□□□ -0.37
SCAF4-205ENST00000472318 FAM217BQ9NTX9 383 aaPredicted RBP12.76□□□□□ -0.37
SCAF4-205ENST00000472318 GFRA3O60609 400 aa12.75□□□□□ -0.37
SCAF4-205ENST00000472318 FMNL1O95466 1100 aaPredicted RBP12.75□□□□□ -0.37
SCAF4-205ENST00000472318 SLC19A1P41440 591 aa12.75□□□□□ -0.37
SCAF4-205ENST00000472318 KDM4AO75164 1064 aa12.74□□□□□ -0.37
SCAF4-205ENST00000472318 NRG2O14511 850 aaPredicted RBP12.73□□□□□ -0.37
SCAF4-205ENST00000472318 BRICD5Q6PL45 260 aa12.73□□□□□ -0.37
SCAF4-205ENST00000472318 Q6ZNB5 142 aa12.73□□□□□ -0.37
SCAF4-205ENST00000472318 FAM160A2Q8N612 972 aaPredicted RBP12.73□□□□□ -0.37
SCAF4-205ENST00000472318 USP46P62068 366 aa12.72□□□□□ -0.37
SCAF4-205ENST00000472318 PLA2G2CQ5R387 149 aa12.72□□□□□ -0.37
SCAF4-205ENST00000472318 RNF19BQ6ZMZ0 732 aa12.72□□□□□ -0.37
SCAF4-205ENST00000472318 KRI1Q8N9T8 703 aaKnown RBP12.72□□□□□ -0.37
SCAF4-205ENST00000472318 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
SCAF4-205ENST00000472318 SPRYD7Q5W111 196 aa12.71□□□□□ -0.37
SCAF4-205ENST00000472318 LIAT1Q6ZQX7 453 aa12.71□□□□□ -0.37
SCAF4-205ENST00000472318 REPIN1Q9BWE0 567 aaKnown RBP12.71□□□□□ -0.37
SCAF4-205ENST00000472318 AMHR2Q16671 573 aa12.7□□□□□ -0.38
SCAF4-205ENST00000472318 MSS51Q4VC12 460 aa12.7□□□□□ -0.38
SCAF4-205ENST00000472318 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
SCAF4-205ENST00000472318 HOXA2O43364 376 aa12.69□□□□□ -0.38
SCAF4-205ENST00000472318 Q3C1V9 767 aa12.69□□□□□ -0.38
SCAF4-205ENST00000472318 PRDM9Q9NQV7 894 aa12.69□□□□□ -0.38
SCAF4-205ENST00000472318 PDZRN3Q9UPQ7 1066 aa12.69□□□□□ -0.38
SCAF4-205ENST00000472318 TRIM67Q6ZTA4 783 aa12.68□□□□□ -0.38
SCAF4-205ENST00000472318 ZNF598Q86UK7 904 aaKnown RBP12.68□□□□□ -0.38
SCAF4-205ENST00000472318 CHMP7Q8WUX9 453 aaPredicted RBP12.67□□□□□ -0.38
SCAF4-205ENST00000472318 SNAPC4Q5SXM2 1469 aa12.66□□□□□ -0.38
SCAF4-205ENST00000472318 HLA-CQ95604 372 aa12.66□□□□□ -0.38
SCAF4-205ENST00000472318 FCF1Q9Y324 198 aaKnown RBP12.66□□□□□ -0.38
SCAF4-205ENST00000472318 TDRD9Q8NDG6 1382 aaKnown RBP12.66□□□□□ -0.38
SCAF4-205ENST00000472318 LCE2BO14633 110 aa12.65□□□□□ -0.38
SCAF4-205ENST00000472318 TTLL12Q14166 644 aaPredicted RBP12.64□□□□□ -0.39
SCAF4-205ENST00000472318 ZNF697Q5TEC3 545 aa12.64□□□□□ -0.39
SCAF4-205ENST00000472318 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
SCAF4-205ENST00000472318 PRR20EP86478 221 aa12.63□□□□□ -0.39
SCAF4-205ENST00000472318 PRR20CP86479 221 aa12.63□□□□□ -0.39
SCAF4-205ENST00000472318 PRR20DP86480 221 aa12.63□□□□□ -0.39
SCAF4-205ENST00000472318 PRR20BP86481 221 aa12.63□□□□□ -0.39
SCAF4-205ENST00000472318 PRR20AP86496 221 aa12.63□□□□□ -0.39
SCAF4-205ENST00000472318 ABCC8Q09428 1581 aa12.63□□□□□ -0.39
SCAF4-205ENST00000472318 DNMBPQ6XZF7 1577 aa12.62□□□□□ -0.39
SCAF4-205ENST00000472318 RAD54L2Q9Y4B4 1467 aa12.62□□□□□ -0.39
SCAF4-205ENST00000472318 SSTR3P32745 418 aaPredicted RBP12.62□□□□□ -0.39
SCAF4-205ENST00000472318 POLA1P09884 1462 aaPredicted RBP12.61□□□□□ -0.39
SCAF4-205ENST00000472318 RPIAP49247 311 aa12.61□□□□□ -0.39
SCAF4-205ENST00000472318 MMP16P51512 607 aa12.61□□□□□ -0.39
SCAF4-205ENST00000472318 GIGYF2Q6Y7W6 1299 aaKnown RBP12.61□□□□□ -0.39
SCAF4-205ENST00000472318 USB1Q9BQ65 265 aaKnown RBP12.61□□□□□ -0.39
SCAF4-205ENST00000472318 GUCA2AQ02747 115 aa12.6□□□□□ -0.39
SCAF4-205ENST00000472318 NUTM1Q86Y26 1132 aa12.6□□□□□ -0.39
SCAF4-205ENST00000472318 TOP2AP11388 1531 aaKnown RBP12.59□□□□□ -0.39
SCAF4-205ENST00000472318 GDF9O60383 454 aa12.59□□□□□ -0.39
SCAF4-205ENST00000472318 DXOO77932 396 aaKnown RBP12.58□□□□□ -0.4
SCAF4-205ENST00000472318 TRAF7Q6Q0C0 670 aa12.58□□□□□ -0.4
SCAF4-205ENST00000472318 ERCC6L2Q5T890 1561 aa12.57□□□□□ -0.4
SCAF4-205ENST00000472318 TRIM66O15016 1216 aa12.57□□□□□ -0.4
SCAF4-205ENST00000472318 PARP9Q8IXQ6 854 aa12.57□□□□□ -0.4
SCAF4-205ENST00000472318 AK7Q96M32 723 aa12.56□□□□□ -0.4
SCAF4-205ENST00000472318 PRDM2Q13029 1718 aa12.55□□□□□ -0.4
SCAF4-205ENST00000472318 SPIRE2Q8WWL2 714 aa12.55□□□□□ -0.4
SCAF4-205ENST00000472318 SOGA1O94964 1423 aa12.54□□□□□ -0.4
SCAF4-205ENST00000472318 SYNJ2O15056 1496 aa12.54□□□□□ -0.4
SCAF4-205ENST00000472318 MAGI1Q96QZ7 1491 aaPredicted RBP12.54□□□□□ -0.4
SCAF4-205ENST00000472318 TNFRSF10AO00220 468 aa12.53□□□□□ -0.4
SCAF4-205ENST00000472318 FDX1P10109 184 aa12.53□□□□□ -0.4
SCAF4-205ENST00000472318 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
SCAF4-205ENST00000472318 PCDHGC3Q9UN70 934 aa12.53□□□□□ -0.4
SCAF4-205ENST00000472318 KIF13AQ9H1H9 1805 aa12.53□□□□□ -0.4
SCAF4-205ENST00000472318 FAM69CQ0P6D2 419 aa12.52□□□□□ -0.41
SCAF4-205ENST00000472318 RETREG3Q86VR2 466 aa12.52□□□□□ -0.41
SCAF4-205ENST00000472318 CCDC88BA6NC98 1476 aa12.52□□□□□ -0.41
SCAF4-205ENST00000472318 CD2BP2O95400 341 aaKnown RBP12.51□□□□□ -0.41
SCAF4-205ENST00000472318 FBXO41Q8TF61 875 aa12.51□□□□□ -0.41
SCAF4-205ENST00000472318 SYMPKQ92797 1274 aaKnown RBP12.51□□□□□ -0.41
SCAF4-205ENST00000472318 BEGAINQ9BUH8 593 aa12.51□□□□□ -0.41
SCAF4-205ENST00000472318 GRIN2BQ13224 1484 aa12.49□□□□□ -0.41
SCAF4-205ENST00000472318 MOXD2PA6NHM9 499 aa12.49□□□□□ -0.41
SCAF4-205ENST00000472318 MS4A1P11836 297 aa12.49□□□□□ -0.41
SCAF4-205ENST00000472318 JUNDP17535 347 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms