RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ADAMTS13Q76LX8 1427 aa11.01□□□□□ -0.65
HDAC3-206ENST00000471968 CASKIN1Q8WXD9 1431 aa11.01□□□□□ -0.65
HDAC3-206ENST00000471968 ADGRB2O60241 1585 aa11□□□□□ -0.65
HDAC3-206ENST00000471968 FAM98CQ17RN3 349 aaKnown RBP11□□□□□ -0.65
HDAC3-206ENST00000471968 SYT17Q9BSW7 474 aa11□□□□□ -0.65
HDAC3-206ENST00000471968 PTPRUQ92729 1446 aa11□□□□□ -0.65
HDAC3-206ENST00000471968 ADGRL3Q9HAR2 1447 aa11□□□□□ -0.65
HDAC3-206ENST00000471968 RIMS2Q9UQ26 1411 aa11□□□□□ -0.65
HDAC3-206ENST00000471968 C1orf167Q5SNV9 1468 aa11□□□□□ -0.65
HDAC3-206ENST00000471968 LAMC1P11047 1609 aa10.99□□□□□ -0.65
HDAC3-206ENST00000471968 TRIM37O94972 964 aa10.99□□□□□ -0.65
HDAC3-206ENST00000471968 HDGFP51858 240 aaKnown RBP10.99□□□□□ -0.65
HDAC3-206ENST00000471968 FHDC1Q9C0D6 1143 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-206ENST00000471968 RPRD2Q5VT52 1461 aaKnown RBP10.99□□□□□ -0.65
HDAC3-206ENST00000471968 EHBP1L1Q8N3D4 1523 aa10.99□□□□□ -0.65
HDAC3-206ENST00000471968 TSPY4P0CV99 314 aa10.98□□□□□ -0.65
HDAC3-206ENST00000471968 TSPY10P0CW01 314 aa10.98□□□□□ -0.65
HDAC3-206ENST00000471968 EIF2AK4Q9P2K8 1649 aaKnown RBP10.98□□□□□ -0.65
HDAC3-206ENST00000471968 SHANK3Q9BYB0 1731 aa10.98□□□□□ -0.65
HDAC3-206ENST00000471968 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
HDAC3-206ENST00000471968 NOS1P29475 1434 aa10.97□□□□□ -0.65
HDAC3-206ENST00000471968 MYOM1P52179 1685 aa10.97□□□□□ -0.65
HDAC3-206ENST00000471968 NUP188Q5SRE5 1749 aa10.96□□□□□ -0.65
HDAC3-206ENST00000471968 RREB1Q92766 1687 aa10.95□□□□□ -0.66
HDAC3-206ENST00000471968 ZBTB7AO95365 584 aa10.95□□□□□ -0.66
HDAC3-206ENST00000471968 GPR162Q16538 588 aa10.95□□□□□ -0.66
HDAC3-206ENST00000471968 PTGER2P43116 358 aa10.94□□□□□ -0.66
HDAC3-206ENST00000471968 XPCQ01831 940 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-206ENST00000471968 PCNTO95613 3336 aa10.93□□□□□ -0.66
HDAC3-206ENST00000471968 UBTFP17480 764 aaKnown RBP10.93□□□□□ -0.66
HDAC3-206ENST00000471968 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.93□□□□□ -0.66
HDAC3-206ENST00000471968 SLC52A1Q9NWF4 448 aa10.93□□□□□ -0.66
HDAC3-206ENST00000471968 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-206ENST00000471968 DLC1Q96QB1 1528 aa10.93□□□□□ -0.66
HDAC3-206ENST00000471968 DNAJC5GQ8N7S2 189 aa10.92□□□□□ -0.66
HDAC3-206ENST00000471968 PDGFDQ9GZP0 370 aaPredicted RBP10.92□□□□□ -0.66
HDAC3-206ENST00000471968 TMEM131LA2VDJ0 1609 aa10.91□□□□□ -0.66
HDAC3-206ENST00000471968 NPHP3Q7Z494 1330 aa10.91□□□□□ -0.66
HDAC3-206ENST00000471968 NALCNQ8IZF0 1738 aa10.9□□□□□ -0.66
HDAC3-206ENST00000471968 APLP1P51693 650 aa10.9□□□□□ -0.66
HDAC3-206ENST00000471968 HAP1P54257 671 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-206ENST00000471968 FAM196AQ6ZSG2 479 aa10.9□□□□□ -0.66
HDAC3-206ENST00000471968 GPBP1L1Q9HC44 474 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-206ENST00000471968 WWC3Q9ULE0 1092 aa10.9□□□□□ -0.66
HDAC3-206ENST00000471968 USP32Q8NFA0 1604 aa10.9□□□□□ -0.66
HDAC3-206ENST00000471968 XRN1Q8IZH2 1706 aaKnown RBP10.89□□□□□ -0.67
HDAC3-206ENST00000471968 PXDNQ92626 1479 aa10.89□□□□□ -0.67
HDAC3-206ENST00000471968 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
HDAC3-206ENST00000471968 ATP10DQ9P241 1426 aa10.89□□□□□ -0.67
HDAC3-206ENST00000471968 FYCO1Q9BQS8 1478 aa10.88□□□□□ -0.67
HDAC3-206ENST00000471968 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
HDAC3-206ENST00000471968 CHGAP10645 457 aaKnown RBP10.88□□□□□ -0.67
HDAC3-206ENST00000471968 MYO5BQ9ULV0 1848 aa10.88□□□□□ -0.67
HDAC3-206ENST00000471968 ADGRL2O95490 1459 aa10.87□□□□□ -0.67
HDAC3-206ENST00000471968 FOXO3O43524 673 aa10.87□□□□□ -0.67
HDAC3-206ENST00000471968 PLCH1Q4KWH8 1693 aa10.87□□□□□ -0.67
HDAC3-206ENST00000471968 CASZ1Q86V15 1759 aa10.87□□□□□ -0.67
HDAC3-206ENST00000471968 KANK1Q14678 1352 aa10.87□□□□□ -0.67
HDAC3-206ENST00000471968 PTPN23Q9H3S7 1636 aa10.87□□□□□ -0.67
HDAC3-206ENST00000471968 ARHGEF5Q12774 1597 aa10.86□□□□□ -0.67
HDAC3-206ENST00000471968 EEA1Q15075 1411 aa10.86□□□□□ -0.67
HDAC3-206ENST00000471968 ESCO1Q5FWF5 840 aa10.86□□□□□ -0.67
HDAC3-206ENST00000471968 ZNF526Q8TF50 670 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-206ENST00000471968 ANO8Q9HCE9 1232 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-206ENST00000471968 NWD2Q9ULI1 1742 aa10.85□□□□□ -0.67
HDAC3-206ENST00000471968 GCC2Q8IWJ2 1684 aa10.85□□□□□ -0.67
HDAC3-206ENST00000471968 DUOX2Q9NRD8 1548 aa10.84□□□□□ -0.67
HDAC3-206ENST00000471968 CABLES1Q8TDN4 633 aa10.84□□□□□ -0.67
HDAC3-206ENST00000471968 METP08581 1390 aa10.82□□□□□ -0.68
HDAC3-206ENST00000471968 ARXQ96QS3 562 aa10.82□□□□□ -0.68
HDAC3-206ENST00000471968 SPATA31A3Q5VYP0 1347 aa10.82□□□□□ -0.68
HDAC3-206ENST00000471968 LMTK2Q8IWU2 1503 aa10.81□□□□□ -0.68
HDAC3-206ENST00000471968 BTG4Q9NY30 223 aa10.81□□□□□ -0.68
HDAC3-206ENST00000471968 THSD7AQ9UPZ6 1657 aa10.81□□□□□ -0.68
HDAC3-206ENST00000471968 LRPPRCP42704 1394 aaKnown RBP10.8□□□□□ -0.68
HDAC3-206ENST00000471968 AATKQ6ZMQ8 1374 aa10.8□□□□□ -0.68
HDAC3-206ENST00000471968 MAP3K5Q99683 1374 aa10.8□□□□□ -0.68
HDAC3-206ENST00000471968 JMYQ8N9B5 988 aa10.8□□□□□ -0.68
HDAC3-206ENST00000471968 SGIP1Q9BQI5 828 aa10.8□□□□□ -0.68
HDAC3-206ENST00000471968 SPATA31A5Q5VU36 1347 aa10.8□□□□□ -0.68
HDAC3-206ENST00000471968 SPATA31A7Q8IWB4 1347 aa10.8□□□□□ -0.68
HDAC3-206ENST00000471968 FAM161AQ3B820 660 aa10.79□□□□□ -0.68
HDAC3-206ENST00000471968 KLHL34Q8N239 644 aa10.79□□□□□ -0.68
HDAC3-206ENST00000471968 KLRG1Q96E93 195 aa10.79□□□□□ -0.68
HDAC3-206ENST00000471968 BCL11BQ9C0K0 894 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-206ENST00000471968 MTFR1LQ9H019 292 aa10.79□□□□□ -0.68
HDAC3-206ENST00000471968 NEXMIFQ5QGS0 1516 aa10.79□□□□□ -0.68
HDAC3-206ENST00000471968 KIF15Q9NS87 1388 aa10.78□□□□□ -0.68
HDAC3-206ENST00000471968 ABCC5O15440 1437 aa10.78□□□□□ -0.68
HDAC3-206ENST00000471968 CEP162Q5TB80 1403 aa10.78□□□□□ -0.68
HDAC3-206ENST00000471968 TNS2Q63HR2 1409 aa10.78□□□□□ -0.68
HDAC3-206ENST00000471968 ERBINQ96RT1 1412 aa10.78□□□□□ -0.68
HDAC3-206ENST00000471968 NRAPQ86VF7 1730 aa10.78□□□□□ -0.68
HDAC3-206ENST00000471968 RRP7BPQ9NSQ0 103 aa10.77□□□□□ -0.69
HDAC3-206ENST00000471968 NRXN3Q9Y4C0 1643 aa10.76□□□□□ -0.69
HDAC3-206ENST00000471968 HTRA3P83110 453 aa10.76□□□□□ -0.69
HDAC3-206ENST00000471968 PDE3BQ13370 1112 aa10.76□□□□□ -0.69
HDAC3-206ENST00000471968 KIF3CO14782 793 aa10.75□□□□□ -0.69
HDAC3-206ENST00000471968 GRIN3BO60391 1043 aa10.75□□□□□ -0.69
HDAC3-206ENST00000471968 CROCC2H7BZ55 1655 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms