RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 HMX1Q9NP08 348 aaPredicted RBP11.52□□□□□ -0.57
SMC5-202ENST00000471372 HOXA2O43364 376 aa11.51□□□□□ -0.57
SMC5-202ENST00000471372 GPR37L1O60883 481 aa11.51□□□□□ -0.57
SMC5-202ENST00000471372 FDX1P10109 184 aa11.51□□□□□ -0.57
SMC5-202ENST00000471372 GCGRP47871 477 aa11.5□□□□□ -0.57
SMC5-202ENST00000471372 GUCA2AQ02747 115 aa11.5□□□□□ -0.57
SMC5-202ENST00000471372 CTDSPL2Q05D32 466 aa11.5□□□□□ -0.57
SMC5-202ENST00000471372 PROX2Q3B8N5 592 aa11.5□□□□□ -0.57
SMC5-202ENST00000471372 HLA-CQ95604 372 aa11.5□□□□□ -0.57
SMC5-202ENST00000471372 PCDHGC3Q9UN70 934 aa11.5□□□□□ -0.57
SMC5-202ENST00000471372 RFX1P22670 979 aa11.49□□□□□ -0.57
SMC5-202ENST00000471372 PBXIP1Q96AQ6 731 aa11.49□□□□□ -0.57
SMC5-202ENST00000471372 TRIM34Q9BYJ4 488 aa11.49□□□□□ -0.57
SMC5-202ENST00000471372 AXIN2Q9Y2T1 843 aa11.49□□□□□ -0.57
SMC5-202ENST00000471372 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.48□□□□□ -0.57
SMC5-202ENST00000471372 PSDA5PKW4 1024 aaPredicted RBP11.48□□□□□ -0.57
SMC5-202ENST00000471372 USP46P62068 366 aa11.48□□□□□ -0.57
SMC5-202ENST00000471372 TMCO4Q5TGY1 634 aa11.48□□□□□ -0.57
SMC5-202ENST00000471372 CFAP70Q5T0N1 1121 aa11.47□□□□□ -0.57
SMC5-202ENST00000471372 SLC10A3P09131 477 aa11.46□□□□□ -0.57
SMC5-202ENST00000471372 VAC14Q08AM6 782 aa11.46□□□□□ -0.57
SMC5-202ENST00000471372 WASHC4Q2M389 1173 aa11.46□□□□□ -0.57
SMC5-202ENST00000471372 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
SMC5-202ENST00000471372 RGS22Q8NE09 1264 aa11.46□□□□□ -0.57
SMC5-202ENST00000471372 SRPK2P78362 688 aaKnown RBP11.45□□□□□ -0.58
SMC5-202ENST00000471372 LRRN4Q8WUT4 740 aa11.45□□□□□ -0.58
SMC5-202ENST00000471372 MTMR7Q9Y216 660 aa11.44□□□□□ -0.58
SMC5-202ENST00000471372 MFAP1P55081 439 aaKnown RBP11.43□□□□□ -0.58
SMC5-202ENST00000471372 PDE4CQ08493 712 aa11.43□□□□□ -0.58
SMC5-202ENST00000471372 TSC1Q92574 1164 aa11.43□□□□□ -0.58
SMC5-202ENST00000471372 PPP1R12CQ9BZL4 782 aa11.43□□□□□ -0.58
SMC5-202ENST00000471372 CFAP99D6REC4 459 aa11.42□□□□□ -0.58
SMC5-202ENST00000471372 MTMR2Q13614 643 aa11.42□□□□□ -0.58
SMC5-202ENST00000471372 RSPH4AQ5TD94 716 aa11.42□□□□□ -0.58
SMC5-202ENST00000471372 EPS8L1Q8TE68 723 aa11.42□□□□□ -0.58
SMC5-202ENST00000471372 KCNK17Q96T54 332 aa11.42□□□□□ -0.58
SMC5-202ENST00000471372 CARNS1A5YM72 827 aa11.41□□□□□ -0.58
SMC5-202ENST00000471372 ARHGAP33O14559 1287 aa11.41□□□□□ -0.58
SMC5-202ENST00000471372 SWT1Q5T5J6 900 aaKnown RBP11.41□□□□□ -0.58
SMC5-202ENST00000471372 HELBQ8NG08 1087 aaPredicted RBP11.41□□□□□ -0.58
SMC5-202ENST00000471372 KIAA1468Q9P260 1216 aa11.41□□□□□ -0.58
SMC5-202ENST00000471372 ALG2Q9H553 416 aa11.4□□□□□ -0.58
SMC5-202ENST00000471372 USTQ9Y2C2 406 aa11.39□□□□□ -0.59
SMC5-202ENST00000471372 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
SMC5-202ENST00000471372 CSB-PGBD3P0DP91 1061 aa11.38□□□□□ -0.59
SMC5-202ENST00000471372 BRD1O95696 1058 aa11.37□□□□□ -0.59
SMC5-202ENST00000471372 ADGRD1Q6QNK2 874 aa11.37□□□□□ -0.59
SMC5-202ENST00000471372 UCN2Q96RP3 112 aa11.37□□□□□ -0.59
SMC5-202ENST00000471372 C6orf229H3BNL8 230 aa11.36□□□□□ -0.59
SMC5-202ENST00000471372 LMOD1P29536 600 aaPredicted RBP11.36□□□□□ -0.59
SMC5-202ENST00000471372 FOXD4L5Q5VV16 416 aaPredicted RBP11.36□□□□□ -0.59
SMC5-202ENST00000471372 FOXD4L4Q8WXT5 416 aaPredicted RBP11.36□□□□□ -0.59
SMC5-202ENST00000471372 ZBED2Q9BTP6 218 aa11.36□□□□□ -0.59
SMC5-202ENST00000471372 PRR7Q8TB68 274 aa11.35□□□□□ -0.59
SMC5-202ENST00000471372 TFIP11Q9UBB9 837 aaKnown RBP11.35□□□□□ -0.59
SMC5-202ENST00000471372 KCNA1Q09470 495 aa11.34□□□□□ -0.59
SMC5-202ENST00000471372 FUT2Q10981 343 aa11.34□□□□□ -0.59
SMC5-202ENST00000471372 SYMPKQ92797 1274 aaKnown RBP11.34□□□□□ -0.59
SMC5-202ENST00000471372 SEPT9Q9UHD8 586 aaPredicted RBP11.34□□□□□ -0.59
SMC5-202ENST00000471372 PATL2C9JE40 543 aaKnown RBP11.33□□□□□ -0.6
SMC5-202ENST00000471372 PSEN2P49810 448 aa11.33□□□□□ -0.6
SMC5-202ENST00000471372 CDCA8Q53HL2 280 aa11.33□□□□□ -0.6
SMC5-202ENST00000471372 NR6A1Q15406 480 aa11.32□□□□□ -0.6
SMC5-202ENST00000471372 DMRTA1Q5VZB9 504 aa11.32□□□□□ -0.6
SMC5-202ENST00000471372 TK2O00142 265 aa11.31□□□□□ -0.6
SMC5-202ENST00000471372 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
SMC5-202ENST00000471372 ZNF428Q96B54 188 aa11.31□□□□□ -0.6
SMC5-202ENST00000471372 SLF2Q8IX21 1173 aa11.3□□□□□ -0.6
SMC5-202ENST00000471372 KCNH8Q96L42 1107 aa11.3□□□□□ -0.6
SMC5-202ENST00000471372 CFHP08603 1231 aa11.29□□□□□ -0.6
SMC5-202ENST00000471372 SOX11P35716 441 aa11.29□□□□□ -0.6
SMC5-202ENST00000471372 GRIPAP1Q4V328 841 aa11.29□□□□□ -0.6
SMC5-202ENST00000471372 HCSTQ9UBK5 93 aa11.29□□□□□ -0.6
SMC5-202ENST00000471372 RABGEF1Q9UJ41 708 aa11.29□□□□□ -0.6
SMC5-202ENST00000471372 MAFBQ9Y5Q3 323 aaPredicted RBP11.28□□□□□ -0.6
SMC5-202ENST00000471372 TMEM88BA6NKF7 163 aa11.27□□□□□ -0.61
SMC5-202ENST00000471372 HDGFP51858 240 aaKnown RBP11.27□□□□□ -0.61
SMC5-202ENST00000471372 SEMA3FQ13275 785 aa11.27□□□□□ -0.61
SMC5-202ENST00000471372 TBC1D9Q6ZT07 1266 aa11.27□□□□□ -0.61
SMC5-202ENST00000471372 HRO43593 1189 aa11.26□□□□□ -0.61
SMC5-202ENST00000471372 ATG7O95352 703 aa11.26□□□□□ -0.61
SMC5-202ENST00000471372 ATP6V1AP38606 617 aa11.26□□□□□ -0.61
SMC5-202ENST00000471372 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
SMC5-202ENST00000471372 RBM25P49756 843 aaKnown RBP11.25□□□□□ -0.61
SMC5-202ENST00000471372 SAMD7Q7Z3H4 446 aa11.25□□□□□ -0.61
SMC5-202ENST00000471372 VRTNQ9H8Y1 702 aa11.25□□□□□ -0.61
SMC5-202ENST00000471372 FAM98CQ17RN3 349 aaKnown RBP11.24□□□□□ -0.61
SMC5-202ENST00000471372 STAC3Q96MF2 364 aa11.24□□□□□ -0.61
SMC5-202ENST00000471372 SLC4A3P48751 1232 aa11.23□□□□□ -0.61
SMC5-202ENST00000471372 RNF40O75150 1001 aa11.22□□□□□ -0.61
SMC5-202ENST00000471372 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
SMC5-202ENST00000471372 EIF4G2P78344 907 aaKnown RBP eCLIP11.21□□□□□ -0.61
SMC5-202ENST00000471372 RETREG3Q86VR2 466 aa11.21□□□□□ -0.61
SMC5-202ENST00000471372 ATP9BO43861 1147 aa11.2□□□□□ -0.62
SMC5-202ENST00000471372 PUS10Q3MIT2 529 aaKnown RBP11.2□□□□□ -0.62
SMC5-202ENST00000471372 PNMA1Q8ND90 353 aa11.2□□□□□ -0.62
SMC5-202ENST00000471372 KCTD12Q96CX2 325 aaKnown RBP11.2□□□□□ -0.62
SMC5-202ENST00000471372 SLC4A5Q9BY07 1137 aa11.2□□□□□ -0.62
SMC5-202ENST00000471372 PIK3CDO00329 1044 aa11.18□□□□□ -0.62
SMC5-202ENST00000471372 NR1H3Q13133 447 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms