RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 MYOM1P52179 1685 aa16.37■□□□□ 0.21
LINC00880-201ENST00000471357 CPS1P31327 1500 aa16.36■□□□□ 0.21
LINC00880-201ENST00000471357 CNGB1Q14028 1251 aaPredicted RBP16.36■□□□□ 0.21
LINC00880-201ENST00000471357 CABP2Q9NPB3 220 aa16.36■□□□□ 0.21
LINC00880-201ENST00000471357 PTPRUQ92729 1446 aa16.35■□□□□ 0.21
LINC00880-201ENST00000471357 SRPK2P78362 688 aaKnown RBP16.35■□□□□ 0.21
LINC00880-201ENST00000471357 AMOTL2Q9Y2J4 779 aa16.35■□□□□ 0.21
LINC00880-201ENST00000471357 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
LINC00880-201ENST00000471357 ROBO2Q9HCK4 1378 aa16.34■□□□□ 0.21
LINC00880-201ENST00000471357 CDK19Q9BWU1 502 aa16.34■□□□□ 0.21
LINC00880-201ENST00000471357 KNSTRNQ9Y448 316 aa16.34■□□□□ 0.21
LINC00880-201ENST00000471357 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
LINC00880-201ENST00000471357 PIK3R4Q99570 1358 aa16.34■□□□□ 0.21
LINC00880-201ENST00000471357 RALBP1Q15311 655 aa16.33■□□□□ 0.2
LINC00880-201ENST00000471357 YTHDC1Q96MU7 727 aaKnown RBP16.33■□□□□ 0.2
LINC00880-201ENST00000471357 SLC12A5Q9H2X9 1139 aa16.33■□□□□ 0.2
LINC00880-201ENST00000471357 ATAD2Q6PL18 1390 aa16.32■□□□□ 0.2
LINC00880-201ENST00000471357 NPHP4O75161 1426 aaPredicted RBP16.31■□□□□ 0.2
LINC00880-201ENST00000471357 NCKAP5LQ9HCH0 1330 aa16.3■□□□□ 0.2
LINC00880-201ENST00000471357 WASLO00401 505 aaPredicted RBP16.3■□□□□ 0.2
LINC00880-201ENST00000471357 NINLQ9Y2I6 1382 aa16.3■□□□□ 0.2
LINC00880-201ENST00000471357 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
LINC00880-201ENST00000471357 CC2D1BQ5T0F9 858 aaKnown RBP16.29■□□□□ 0.2
LINC00880-201ENST00000471357 AMER1Q5JTC6 1135 aaPredicted RBP16.29■□□□□ 0.2
LINC00880-201ENST00000471357 CARD14Q9BXL6 1004 aa16.29■□□□□ 0.2
LINC00880-201ENST00000471357 PARD3Q8TEW0 1356 aa16.28■□□□□ 0.2
LINC00880-201ENST00000471357 NPC1L1Q9UHC9 1359 aa16.27■□□□□ 0.2
LINC00880-201ENST00000471357 KCNA6P17658 529 aa16.27■□□□□ 0.2
LINC00880-201ENST00000471357 CCDC184Q52MB2 194 aa16.27■□□□□ 0.2
LINC00880-201ENST00000471357 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.2
LINC00880-201ENST00000471357 MYBBP1AQ9BQG0 1328 aaKnown RBP16.27■□□□□ 0.19
LINC00880-201ENST00000471357 ANKRD36BQ8N2N9 1353 aa16.27■□□□□ 0.19
LINC00880-201ENST00000471357 MRS2Q9HD23 443 aa16.26■□□□□ 0.19
LINC00880-201ENST00000471357 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.25■□□□□ 0.19
LINC00880-201ENST00000471357 NSD3Q9BZ95 1437 aa16.24■□□□□ 0.19
LINC00880-201ENST00000471357 TERF2IPQ9NYB0 399 aa16.24■□□□□ 0.19
LINC00880-201ENST00000471357 CABP1Q9NZU7 370 aa16.24■□□□□ 0.19
LINC00880-201ENST00000471357 CHD2O14647 1828 aaKnown RBP16.24■□□□□ 0.19
LINC00880-201ENST00000471357 ADGRB2O60241 1585 aa16.23■□□□□ 0.19
LINC00880-201ENST00000471357 HSPA2P54652 639 aa16.23■□□□□ 0.19
LINC00880-201ENST00000471357 NUDT16Q96DE0 195 aaKnown RBP16.23■□□□□ 0.19
LINC00880-201ENST00000471357 A0A1W2PP64 1363 aa16.21■□□□□ 0.19
LINC00880-201ENST00000471357 BRD4O60885 1362 aaPredicted RBP16.21■□□□□ 0.19
LINC00880-201ENST00000471357 HDGFL2Q7Z4V5 671 aaPredicted RBP16.21■□□□□ 0.19
LINC00880-201ENST00000471357 NLRP13Q86W25 1043 aa16.21■□□□□ 0.19
LINC00880-201ENST00000471357 CENPBP07199 599 aaPredicted RBP16.21■□□□□ 0.18
LINC00880-201ENST00000471357 CCDC61Q9Y6R9 512 aa16.21■□□□□ 0.18
LINC00880-201ENST00000471357 LMTK3Q96Q04 1460 aa16.2■□□□□ 0.18
LINC00880-201ENST00000471357 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
LINC00880-201ENST00000471357 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
LINC00880-201ENST00000471357 PPIP5K1Q6PFW1 1433 aa16.19■□□□□ 0.18
LINC00880-201ENST00000471357 PRR36Q9H6K5 1346 aa16.18■□□□□ 0.18
LINC00880-201ENST00000471357 ATP7BP35670 1465 aa16.18■□□□□ 0.18
LINC00880-201ENST00000471357 USP32Q8NFA0 1604 aa16.18■□□□□ 0.18
LINC00880-201ENST00000471357 FAM9BQ8IZU0 186 aa16.18■□□□□ 0.18
LINC00880-201ENST00000471357 PPP2R1AP30153 589 aa16.17■□□□□ 0.18
LINC00880-201ENST00000471357 NSD2O96028 1365 aa16.15■□□□□ 0.18
LINC00880-201ENST00000471357 NWD1Q149M9 1564 aa16.15■□□□□ 0.18
LINC00880-201ENST00000471357 NUTM2FA1L443 756 aa16.15■□□□□ 0.18
LINC00880-201ENST00000471357 MORC1Q86VD1 984 aa16.15■□□□□ 0.18
LINC00880-201ENST00000471357 CPSF1Q10570 1443 aaKnown RBP16.15■□□□□ 0.18
LINC00880-201ENST00000471357 PNISRQ8TF01 805 aaKnown RBP16.14■□□□□ 0.17
LINC00880-201ENST00000471357 PLEKHG3A1L390 1219 aa16.13■□□□□ 0.17
LINC00880-201ENST00000471357 ZNF692Q9BU19 519 aaPredicted RBP16.13■□□□□ 0.17
LINC00880-201ENST00000471357 RBM33Q96EV2 1170 aaKnown RBP16.12■□□□□ 0.17
LINC00880-201ENST00000471357 CDC42BPGQ6DT37 1551 aa16.12■□□□□ 0.17
LINC00880-201ENST00000471357 PROSER2Q86WR7 435 aaPredicted RBP16.12■□□□□ 0.17
LINC00880-201ENST00000471357 FYB1O15117 783 aa16.11■□□□□ 0.17
LINC00880-201ENST00000471357 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
LINC00880-201ENST00000471357 TOPAZ1Q8N9V7 1692 aa16.11■□□□□ 0.17
LINC00880-201ENST00000471357 ADGRL3Q9HAR2 1447 aa16.11■□□□□ 0.17
LINC00880-201ENST00000471357 EDC4Q6P2E9 1401 aaKnown RBP16.1■□□□□ 0.17
LINC00880-201ENST00000471357 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
LINC00880-201ENST00000471357 NKTRP30414 1462 aaKnown RBP16.1■□□□□ 0.17
LINC00880-201ENST00000471357 ACEP12821 1306 aa16.1■□□□□ 0.17
LINC00880-201ENST00000471357 NALCNQ8IZF0 1738 aa16.1■□□□□ 0.17
LINC00880-201ENST00000471357 STRCQ7RTU9 1775 aa16.1■□□□□ 0.17
LINC00880-201ENST00000471357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.09■□□□□ 0.17
LINC00880-201ENST00000471357 GGNBP2Q9H3C7 697 aa16.09■□□□□ 0.17
LINC00880-201ENST00000471357 HNRNPUQ00839 825 aaKnown RBP eCLIP16.09■□□□□ 0.17
LINC00880-201ENST00000471357 FMN2Q9NZ56 1722 aa16.08■□□□□ 0.17
LINC00880-201ENST00000471357 TNNT2P45379 298 aaPredicted RBP16.08■□□□□ 0.16
LINC00880-201ENST00000471357 ITSN1Q15811 1721 aa16.07■□□□□ 0.16
LINC00880-201ENST00000471357 AKAP12Q02952 1782 aa16.07■□□□□ 0.16
LINC00880-201ENST00000471357 PMFBP1Q8TBY8 1022 aa16.07■□□□□ 0.16
LINC00880-201ENST00000471357 MON2Q7Z3U7 1717 aa16.06■□□□□ 0.16
LINC00880-201ENST00000471357 NGDNQ8NEJ9 315 aaKnown RBP16.06■□□□□ 0.16
LINC00880-201ENST00000471357 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
LINC00880-201ENST00000471357 POLR3AO14802 1390 aaPredicted RBP16.05■□□□□ 0.16
LINC00880-201ENST00000471357 C19orf44Q9H6X5 657 aa16.04■□□□□ 0.16
LINC00880-201ENST00000471357 KIF20BQ96Q89 1820 aa16.04■□□□□ 0.16
LINC00880-201ENST00000471357 ANKRD26Q9UPS8 1709 aa16.04■□□□□ 0.16
LINC00880-201ENST00000471357 USP6P35125 1406 aa16.04■□□□□ 0.16
LINC00880-201ENST00000471357 NCOA3Q9Y6Q9 1424 aa16.04■□□□□ 0.16
LINC00880-201ENST00000471357 STRCP1A6NGW2 1772 aa16.04■□□□□ 0.16
LINC00880-201ENST00000471357 TMEM94Q12767 1356 aa16.03■□□□□ 0.16
LINC00880-201ENST00000471357 TTC21BQ7Z4L5 1316 aa16.03■□□□□ 0.16
LINC00880-201ENST00000471357 NME9Q86XW9 330 aa16.03■□□□□ 0.16
LINC00880-201ENST00000471357 MTHFSP49914 203 aa16.02■□□□□ 0.16
LINC00880-201ENST00000471357 WDR43Q15061 677 aaKnown RBP eCLIP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms