RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 APBB1O00213 710 aa10.54□□□□□ -0.72
CKS1B-204ENST00000471245 SOCS7O14512 581 aa10.54□□□□□ -0.72
CKS1B-204ENST00000471245 APLP1P51693 650 aa10.54□□□□□ -0.72
CKS1B-204ENST00000471245 PROSER2Q86WR7 435 aaPredicted RBP10.54□□□□□ -0.72
CKS1B-204ENST00000471245 MOXD2PA6NHM9 499 aa10.53□□□□□ -0.72
CKS1B-204ENST00000471245 RAD21O60216 631 aa10.53□□□□□ -0.72
CKS1B-204ENST00000471245 ATP6V1AP38606 617 aa10.53□□□□□ -0.72
CKS1B-204ENST00000471245 FBXO31Q5XUX0 539 aaPredicted RBP10.53□□□□□ -0.72
CKS1B-204ENST00000471245 ARID3CA6NKF2 412 aa10.52□□□□□ -0.73
CKS1B-204ENST00000471245 LILRB3O75022 631 aa10.5□□□□□ -0.73
CKS1B-204ENST00000471245 FUT2Q10981 343 aa10.5□□□□□ -0.73
CKS1B-204ENST00000471245 PRPF38BQ5VTL8 546 aaKnown RBP10.5□□□□□ -0.73
CKS1B-204ENST00000471245 FNBP4Q8N3X1 1017 aaPredicted RBP10.5□□□□□ -0.73
CKS1B-204ENST00000471245 POM121Q96HA1 1249 aa10.5□□□□□ -0.73
CKS1B-204ENST00000471245 SNRKQ9NRH2 765 aa10.49□□□□□ -0.73
CKS1B-204ENST00000471245 COG6Q9Y2V7 657 aa10.49□□□□□ -0.73
CKS1B-204ENST00000471245 UNC13AQ9UPW8 1703 aa10.48□□□□□ -0.73
CKS1B-204ENST00000471245 HOXA2O43364 376 aa10.48□□□□□ -0.73
CKS1B-204ENST00000471245 NDUFV2P19404 249 aa10.48□□□□□ -0.73
CKS1B-204ENST00000471245 SALL2Q9Y467 1007 aaPredicted RBP10.48□□□□□ -0.73
CKS1B-204ENST00000471245 PCDHB3Q9Y5E6 796 aa10.48□□□□□ -0.73
CKS1B-204ENST00000471245 QPCTQ16769 361 aa10.47□□□□□ -0.73
CKS1B-204ENST00000471245 MORN1Q5T089 497 aa10.47□□□□□ -0.73
CKS1B-204ENST00000471245 MTMR14Q8NCE2 650 aa10.47□□□□□ -0.73
CKS1B-204ENST00000471245 NR1I2O75469 434 aa10.46□□□□□ -0.73
CKS1B-204ENST00000471245 CSPP1Q1MSJ5 1256 aa10.46□□□□□ -0.73
CKS1B-204ENST00000471245 ARID3AQ99856 593 aa10.46□□□□□ -0.73
CKS1B-204ENST00000471245 TJAP1Q5JTD0 557 aa10.45□□□□□ -0.74
CKS1B-204ENST00000471245 ZBTB3Q9H5J0 574 aa10.45□□□□□ -0.74
CKS1B-204ENST00000471245 PCDHB15Q9Y5E8 787 aa10.45□□□□□ -0.74
CKS1B-204ENST00000471245 ITGBL1O95965 494 aaPredicted RBP10.44□□□□□ -0.74
CKS1B-204ENST00000471245 SCUBE3Q8IX30 993 aa10.44□□□□□ -0.74
CKS1B-204ENST00000471245 IL21Q9HBE4 155 aa10.44□□□□□ -0.74
CKS1B-204ENST00000471245 NACADO15069 1562 aa10.43□□□□□ -0.74
CKS1B-204ENST00000471245 FDX1P10109 184 aa10.43□□□□□ -0.74
CKS1B-204ENST00000471245 Q3C1V9 767 aa10.43□□□□□ -0.74
CKS1B-204ENST00000471245 CCDC82Q8N4S0 544 aa10.43□□□□□ -0.74
CKS1B-204ENST00000471245 RTL5Q5HYW3 569 aaPredicted RBP10.42□□□□□ -0.74
CKS1B-204ENST00000471245 IFFO2Q5TF58 517 aa10.42□□□□□ -0.74
CKS1B-204ENST00000471245 MTRQ99707 1265 aa10.42□□□□□ -0.74
CKS1B-204ENST00000471245 PRM3Q9NNZ6 103 aa10.42□□□□□ -0.74
CKS1B-204ENST00000471245 SLC27A5Q9Y2P5 690 aa10.42□□□□□ -0.74
CKS1B-204ENST00000471245 NUTM2BA6NNL0 878 aaPredicted RBP10.41□□□□□ -0.74
CKS1B-204ENST00000471245 NUTM2EB1AL46 878 aaPredicted RBP10.41□□□□□ -0.74
CKS1B-204ENST00000471245 AP1G2O75843 785 aa10.41□□□□□ -0.74
CKS1B-204ENST00000471245 HRCP23327 699 aa10.41□□□□□ -0.74
CKS1B-204ENST00000471245 NUTM2DQ5VT03 806 aaPredicted RBP10.41□□□□□ -0.74
CKS1B-204ENST00000471245 BLOC1S3Q6QNY0 202 aa10.41□□□□□ -0.74
CKS1B-204ENST00000471245 NUTM2AQ8IVF1 878 aaPredicted RBP10.41□□□□□ -0.74
CKS1B-204ENST00000471245 CABLES1Q8TDN4 633 aa10.41□□□□□ -0.74
CKS1B-204ENST00000471245 ZPR1O75312 459 aa10.4□□□□□ -0.74
CKS1B-204ENST00000471245 USP17L8P0C7I0 530 aa10.4□□□□□ -0.74
CKS1B-204ENST00000471245 PUS10Q3MIT2 529 aaKnown RBP10.4□□□□□ -0.74
CKS1B-204ENST00000471245 KCNC4Q03721 635 aa10.39□□□□□ -0.75
CKS1B-204ENST00000471245 BRICD5Q6PL45 260 aa10.39□□□□□ -0.75
CKS1B-204ENST00000471245 WWC1Q8IX03 1113 aa10.39□□□□□ -0.75
CKS1B-204ENST00000471245 THAP11Q96EK4 314 aa10.39□□□□□ -0.75
CKS1B-204ENST00000471245 ZNF777Q9ULD5 760 aaPredicted RBP10.39□□□□□ -0.75
CKS1B-204ENST00000471245 PCDHGC3Q9UN70 934 aa10.39□□□□□ -0.75
CKS1B-204ENST00000471245 GDPD2Q9HCC8 539 aa10.38□□□□□ -0.75
CKS1B-204ENST00000471245 SERPINA10Q9UK55 444 aa10.38□□□□□ -0.75
CKS1B-204ENST00000471245 FMNL1O95466 1100 aaPredicted RBP10.37□□□□□ -0.75
CKS1B-204ENST00000471245 COPS2P61201 443 aa10.37□□□□□ -0.75
CKS1B-204ENST00000471245 MTMR2Q13614 643 aa10.37□□□□□ -0.75
CKS1B-204ENST00000471245 ZNF330Q9Y3S2 320 aaPredicted RBP10.36□□□□□ -0.75
CKS1B-204ENST00000471245 GUCA2AQ02747 115 aa10.35□□□□□ -0.75
CKS1B-204ENST00000471245 HLA-CQ95604 372 aa10.35□□□□□ -0.75
CKS1B-204ENST00000471245 CCDC97Q96F63 343 aaPredicted RBP10.35□□□□□ -0.75
CKS1B-204ENST00000471245 HELBQ8NG08 1087 aaPredicted RBP10.34□□□□□ -0.75
CKS1B-204ENST00000471245 ZNF516Q92618 1163 aa10.34□□□□□ -0.75
CKS1B-204ENST00000471245 GJD4Q96KN9 370 aaPredicted RBP10.34□□□□□ -0.75
CKS1B-204ENST00000471245 NDUFB9Q9Y6M9 179 aa10.34□□□□□ -0.75
CKS1B-204ENST00000471245 RETREG3Q86VR2 466 aa10.33□□□□□ -0.76
CKS1B-204ENST00000471245 SPSB2Q99619 263 aa10.33□□□□□ -0.76
CKS1B-204ENST00000471245 TBC1D2BQ9UPU7 963 aa10.33□□□□□ -0.76
CKS1B-204ENST00000471245 BICRAQ9NZM4 1560 aa10.33□□□□□ -0.76
CKS1B-204ENST00000471245 ABL2P42684 1182 aa10.32□□□□□ -0.76
CKS1B-204ENST00000471245 USB1Q9BQ65 265 aaKnown RBP10.32□□□□□ -0.76
CKS1B-204ENST00000471245 ADH1BP00325 375 aa10.31□□□□□ -0.76
CKS1B-204ENST00000471245 MSS51Q4VC12 460 aa10.31□□□□□ -0.76
CKS1B-204ENST00000471245 DESI1Q6ICB0 168 aa10.31□□□□□ -0.76
CKS1B-204ENST00000471245 C6orf229H3BNL8 230 aa10.3□□□□□ -0.76
CKS1B-204ENST00000471245 RGS20O76081 388 aa10.3□□□□□ -0.76
CKS1B-204ENST00000471245 RNF19BQ6ZMZ0 732 aa10.3□□□□□ -0.76
CKS1B-204ENST00000471245 CFAP99D6REC4 459 aa10.29□□□□□ -0.76
CKS1B-204ENST00000471245 CTDSPL2Q05D32 466 aa10.29□□□□□ -0.76
CKS1B-204ENST00000471245 FAM160A2Q8N612 972 aaPredicted RBP10.28□□□□□ -0.76
CKS1B-204ENST00000471245 HMX1Q9NP08 348 aaPredicted RBP10.28□□□□□ -0.76
CKS1B-204ENST00000471245 SYMPKQ92797 1274 aaKnown RBP10.27□□□□□ -0.77
CKS1B-204ENST00000471245 TRIM34Q9BYJ4 488 aa10.27□□□□□ -0.77
CKS1B-204ENST00000471245 MMP16P51512 607 aa10.26□□□□□ -0.77
CKS1B-204ENST00000471245 WASHC4Q2M389 1173 aa10.26□□□□□ -0.77
CKS1B-204ENST00000471245 NKX2-3Q8TAU0 364 aa10.26□□□□□ -0.77
CKS1B-204ENST00000471245 SLC6A16Q9GZN6 736 aa10.26□□□□□ -0.77
CKS1B-204ENST00000471245 GPR37L1O60883 481 aa10.25□□□□□ -0.77
CKS1B-204ENST00000471245 GGCXP38435 758 aa10.25□□□□□ -0.77
CKS1B-204ENST00000471245 IRF5Q13568 498 aa10.25□□□□□ -0.77
CKS1B-204ENST00000471245 PRR7Q8TB68 274 aa10.25□□□□□ -0.77
CKS1B-204ENST00000471245 GLMNQ92990 594 aa10.25□□□□□ -0.77
CKS1B-204ENST00000471245 LRRN4Q8WUT4 740 aa10.24□□□□□ -0.77
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