RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 WDR97A6NE52 1622 aa8.28□□□□□ -1.08
BRCA1-210ENST00000471181 CCDC181Q5TID7 509 aa8.28□□□□□ -1.08
BRCA1-210ENST00000471181 RNF20Q5VTR2 975 aa8.27□□□□□ -1.08
BRCA1-210ENST00000471181 TICAM2Q86XR7 235 aa8.27□□□□□ -1.09
BRCA1-210ENST00000471181 CCDC39Q9UFE4 941 aa8.27□□□□□ -1.09
BRCA1-210ENST00000471181 GOLGA6L10A0A0M3HER8 536 aa8.27□□□□□ -1.09
BRCA1-210ENST00000471181 BCL2L13Q9BXK5 485 aa8.27□□□□□ -1.09
BRCA1-210ENST00000471181 ATP2B1P20020 1258 aa8.26□□□□□ -1.09
BRCA1-210ENST00000471181 WASHC4Q2M389 1173 aa8.26□□□□□ -1.09
BRCA1-210ENST00000471181 WDR70Q9NW82 654 aa8.26□□□□□ -1.09
BRCA1-210ENST00000471181 ROCK2O75116 1388 aaKnown RBP8.26□□□□□ -1.09
BRCA1-210ENST00000471181 FILIP1LQ4L180 1135 aa8.26□□□□□ -1.09
BRCA1-210ENST00000471181 DDX23Q9BUQ8 820 aaKnown RBP8.26□□□□□ -1.09
BRCA1-210ENST00000471181 MATR3P43243 847 aaKnown RBP eCLIP8.26□□□□□ -1.09
BRCA1-210ENST00000471181 TANGO6Q9C0B7 1094 aa8.26□□□□□ -1.09
BRCA1-210ENST00000471181 XBP1P17861 261 aa8.25□□□□□ -1.09
BRCA1-210ENST00000471181 RBM10P98175 930 aaKnown RBP8.25□□□□□ -1.09
BRCA1-210ENST00000471181 RALYLQ86SE5 291 aaKnown RBP8.25□□□□□ -1.09
BRCA1-210ENST00000471181 ZHX3Q9H4I2 956 aa8.25□□□□□ -1.09
BRCA1-210ENST00000471181 CHMP5Q9NZZ3 219 aa8.25□□□□□ -1.09
BRCA1-210ENST00000471181 DEF6Q9H4E7 631 aa8.25□□□□□ -1.09
BRCA1-210ENST00000471181 RABEP1Q15276 862 aa8.25□□□□□ -1.09
BRCA1-210ENST00000471181 FMNL2Q96PY5 1086 aa8.25□□□□□ -1.09
BRCA1-210ENST00000471181 EIF3AQ14152 1382 aaKnown RBP8.25□□□□□ -1.09
BRCA1-210ENST00000471181 RALBP1Q15311 655 aa8.25□□□□□ -1.09
BRCA1-210ENST00000471181 SDF4Q9BRK5 362 aa8.25□□□□□ -1.09
BRCA1-210ENST00000471181 REC8O95072 547 aa8.25□□□□□ -1.09
BRCA1-210ENST00000471181 SSR1P43307 286 aaKnown RBP8.25□□□□□ -1.09
BRCA1-210ENST00000471181 G3BP1Q13283 466 aaKnown RBP eCLIP8.25□□□□□ -1.09
BRCA1-210ENST00000471181 DNAJC2Q99543 621 aaKnown RBP8.25□□□□□ -1.09
BRCA1-210ENST00000471181 TRIM5Q9C035 493 aa8.25□□□□□ -1.09
BRCA1-210ENST00000471181 TERF2IPQ9NYB0 399 aa8.25□□□□□ -1.09
BRCA1-210ENST00000471181 PLIN1O60240 522 aa8.24□□□□□ -1.09
BRCA1-210ENST00000471181 STAMBPO95630 424 aa8.24□□□□□ -1.09
BRCA1-210ENST00000471181 FAM161AQ3B820 660 aa8.24□□□□□ -1.09
BRCA1-210ENST00000471181 CCDC91Q7Z6B0 441 aa8.24□□□□□ -1.09
BRCA1-210ENST00000471181 RNF214Q8ND24 703 aa8.24□□□□□ -1.09
BRCA1-210ENST00000471181 NEUROD6Q96NK8 337 aa8.24□□□□□ -1.09
BRCA1-210ENST00000471181 GRIPAP1Q4V328 841 aa8.24□□□□□ -1.09
BRCA1-210ENST00000471181 PSMD1Q99460 953 aa8.24□□□□□ -1.09
BRCA1-210ENST00000471181 ZNHIT6Q9NWK9 470 aaKnown RBP8.24□□□□□ -1.09
BRCA1-210ENST00000471181 CCER2I3L3R5 266 aa8.24□□□□□ -1.09
BRCA1-210ENST00000471181 CCP110O43303 1012 aa8.24□□□□□ -1.09
BRCA1-210ENST00000471181 BIVM-ERCC5R4GMW8 1640 aa8.23□□□□□ -1.09
BRCA1-210ENST00000471181 RBM25P49756 843 aaKnown RBP8.23□□□□□ -1.09
BRCA1-210ENST00000471181 TEFQ10587 303 aa8.23□□□□□ -1.09
BRCA1-210ENST00000471181 CCNB3Q8WWL7 1395 aa8.23□□□□□ -1.09
BRCA1-210ENST00000471181 PKNOX2Q96KN3 472 aa8.23□□□□□ -1.09
BRCA1-210ENST00000471181 ATP2B2Q01814 1243 aa8.23□□□□□ -1.09
BRCA1-210ENST00000471181 CFAP45Q9UL16 551 aa8.23□□□□□ -1.09
BRCA1-210ENST00000471181 ERICH4A6NGS2 130 aa8.22□□□□□ -1.09
BRCA1-210ENST00000471181 SPC24Q8NBT2 197 aa8.22□□□□□ -1.09
BRCA1-210ENST00000471181 SLC26A8Q96RN1 970 aa8.22□□□□□ -1.09
BRCA1-210ENST00000471181 PPP1R1BQ9UD71 204 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-210ENST00000471181 MAP2K1Q02750 393 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-210ENST00000471181 TSHZ2Q9NRE2 1034 aa8.22□□□□□ -1.09
BRCA1-210ENST00000471181 PODXL2Q9NZ53 605 aa8.22□□□□□ -1.09
BRCA1-210ENST00000471181 EIF3JO75822 258 aaKnown RBP8.22□□□□□ -1.09
BRCA1-210ENST00000471181 DESP17661 470 aa8.22□□□□□ -1.09
BRCA1-210ENST00000471181 TXLNAP40222 546 aa8.22□□□□□ -1.09
BRCA1-210ENST00000471181 FAM177A1Q8N128 213 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-210ENST00000471181 PPM1EQ8WY54 764 aa8.22□□□□□ -1.09
BRCA1-210ENST00000471181 EID1Q9Y6B2 187 aa8.22□□□□□ -1.09
BRCA1-210ENST00000471181 SPATA24Q86W54 205 aa8.22□□□□□ -1.09
BRCA1-210ENST00000471181 CCDC113Q9H0I3 377 aa8.21□□□□□ -1.09
BRCA1-210ENST00000471181 MPHOSPH10O00566 681 aaKnown RBP8.21□□□□□ -1.09
BRCA1-210ENST00000471181 ANAPC15P60006 121 aa8.21□□□□□ -1.09
BRCA1-210ENST00000471181 KIF21AQ7Z4S6 1674 aa8.21□□□□□ -1.09
BRCA1-210ENST00000471181 SPDYE4A6NLX3 237 aa8.21□□□□□ -1.1
BRCA1-210ENST00000471181 USP8P40818 1118 aa8.21□□□□□ -1.1
BRCA1-210ENST00000471181 FOXD1Q16676 465 aa8.21□□□□□ -1.1
BRCA1-210ENST00000471181 PDE4AP27815 886 aa8.21□□□□□ -1.1
BRCA1-210ENST00000471181 CEBPZQ03701 1054 aaKnown RBP8.21□□□□□ -1.1
BRCA1-210ENST00000471181 CENPQQ7L2Z9 268 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-210ENST00000471181 LRRCC1Q9C099 1032 aa8.21□□□□□ -1.1
BRCA1-210ENST00000471181 SERPINC1P01008 464 aa8.21□□□□□ -1.1
BRCA1-210ENST00000471181 LRRFIP2Q9Y608 721 aaKnown RBP8.21□□□□□ -1.1
BRCA1-210ENST00000471181 THOC2Q8NI27 1593 aaKnown RBP8.2□□□□□ -1.1
BRCA1-210ENST00000471181 NASPP49321 788 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-210ENST00000471181 PPFIBP1Q86W92 1011 aa8.2□□□□□ -1.1
BRCA1-210ENST00000471181 CCDC102AQ96A19 550 aa8.2□□□□□ -1.1
BRCA1-210ENST00000471181 SERPINA10Q9UK55 444 aa8.2□□□□□ -1.1
BRCA1-210ENST00000471181 TTC16Q8NEE8 873 aa8.2□□□□□ -1.1
BRCA1-210ENST00000471181 COMMD10Q9Y6G5 202 aa8.2□□□□□ -1.1
BRCA1-210ENST00000471181 ZKSCAN2Q63HK3 967 aa8.2□□□□□ -1.1
BRCA1-210ENST00000471181 MTERF4Q7Z6M4 381 aaKnown RBP8.2□□□□□ -1.1
BRCA1-210ENST00000471181 UBE4AQ14139 1066 aa8.2□□□□□ -1.1
BRCA1-210ENST00000471181 FAM177BA6PVY3 158 aa8.19□□□□□ -1.1
BRCA1-210ENST00000471181 LUC7LQ9NQ29 371 aaKnown RBP8.19□□□□□ -1.1
BRCA1-210ENST00000471181 DDX58O95786 925 aaKnown RBP8.19□□□□□ -1.1
BRCA1-210ENST00000471181 AEBP1Q8IUX7 1158 aa8.19□□□□□ -1.1
BRCA1-210ENST00000471181 KINO60870 393 aaKnown RBP8.19□□□□□ -1.1
BRCA1-210ENST00000471181 ERLIN1O75477 346 aa8.19□□□□□ -1.1
BRCA1-210ENST00000471181 RSPH4AQ5TD94 716 aa8.19□□□□□ -1.1
BRCA1-210ENST00000471181 KIF3BO15066 747 aa8.19□□□□□ -1.1
BRCA1-210ENST00000471181 SART3Q15020 963 aaKnown RBP8.19□□□□□ -1.1
BRCA1-210ENST00000471181 INTS3Q68E01 1043 aaKnown RBP8.19□□□□□ -1.1
BRCA1-210ENST00000471181 TSPY26PQ9H489 355 aa8.19□□□□□ -1.1
BRCA1-210ENST00000471181 CCDC88BA6NC98 1476 aa8.19□□□□□ -1.1
BRCA1-210ENST00000471181 PIP4K2AP48426 406 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms