RNA–Protein interactions for RNA: ENST00000471145.1

NPHP3-205, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-205ENST00000471145 GTF3C3Q9Y5Q9 886 aa9.58□□□□□ -0.88
NPHP3-205ENST00000471145 FDX1P10109 184 aa9.57□□□□□ -0.88
NPHP3-205ENST00000471145 GJA5P36382 358 aa9.56□□□□□ -0.88
NPHP3-205ENST00000471145 TBC1D2Q9BYX2 928 aa9.56□□□□□ -0.88
NPHP3-205ENST00000471145 MMP16P51512 607 aa9.55□□□□□ -0.88
NPHP3-205ENST00000471145 GUCA2AQ02747 115 aa9.55□□□□□ -0.88
NPHP3-205ENST00000471145 EMID1Q96A84 441 aaPredicted RBP9.55□□□□□ -0.88
NPHP3-205ENST00000471145 MOXD2PA6NHM9 499 aa9.54□□□□□ -0.88
NPHP3-205ENST00000471145 LAPTM4AQ15012 233 aa9.54□□□□□ -0.88
NPHP3-205ENST00000471145 SPRYD7Q5W111 196 aa9.54□□□□□ -0.88
NPHP3-205ENST00000471145 LIAT1Q6ZQX7 453 aa9.54□□□□□ -0.88
NPHP3-205ENST00000471145 PCDHGC3Q9UN70 934 aa9.54□□□□□ -0.88
NPHP3-205ENST00000471145 NDUFV2P19404 249 aa9.53□□□□□ -0.88
NPHP3-205ENST00000471145 RETREG3Q86VR2 466 aa9.53□□□□□ -0.88
NPHP3-205ENST00000471145 FCF1Q9Y324 198 aaKnown RBP9.53□□□□□ -0.88
NPHP3-205ENST00000471145 DXOO77932 396 aaKnown RBP9.52□□□□□ -0.89
NPHP3-205ENST00000471145 RPIAP49247 311 aa9.52□□□□□ -0.89
NPHP3-205ENST00000471145 PLA2G2CQ5R387 149 aa9.52□□□□□ -0.89
NPHP3-205ENST00000471145 ZNF598Q86UK7 904 aaKnown RBP9.52□□□□□ -0.89
NPHP3-205ENST00000471145 GPBP1L1Q9HC44 474 aaPredicted RBP9.52□□□□□ -0.89
NPHP3-205ENST00000471145 PRDM9Q9NQV7 894 aa9.52□□□□□ -0.89
NPHP3-205ENST00000471145 C6orf229H3BNL8 230 aa9.51□□□□□ -0.89
NPHP3-205ENST00000471145 SPTLC1O15269 473 aa9.51□□□□□ -0.89
NPHP3-205ENST00000471145 SYMPKQ92797 1274 aaKnown RBP9.51□□□□□ -0.89
NPHP3-205ENST00000471145 TIMELESSQ9UNS1 1208 aa9.51□□□□□ -0.89
NPHP3-205ENST00000471145 SPDYE5A6NIY4 337 aa9.5□□□□□ -0.89
NPHP3-205ENST00000471145 GFRA3O60609 400 aa9.5□□□□□ -0.89
NPHP3-205ENST00000471145 RSBN1LQ6PCB5 846 aaPredicted RBP9.5□□□□□ -0.89
NPHP3-205ENST00000471145 CD2BP2O95400 341 aaKnown RBP9.49□□□□□ -0.89
NPHP3-205ENST00000471145 ZBTB24O43167 697 aaPredicted RBP9.48□□□□□ -0.89
NPHP3-205ENST00000471145 JUNDP17535 347 aa9.48□□□□□ -0.89
NPHP3-205ENST00000471145 RIC3Q7Z5B4 369 aa9.48□□□□□ -0.89
NPHP3-205ENST00000471145 RSPH6AQ9H0K4 717 aa9.48□□□□□ -0.89
NPHP3-205ENST00000471145 MTMR2Q13614 643 aa9.47□□□□□ -0.89
NPHP3-205ENST00000471145 TUSC1Q2TAM9 212 aa9.47□□□□□ -0.89
NPHP3-205ENST00000471145 PDZRN3Q9UPQ7 1066 aa9.47□□□□□ -0.89
NPHP3-205ENST00000471145 NRG2O14511 850 aaPredicted RBP9.46□□□□□ -0.9
NPHP3-205ENST00000471145 ZNF697Q5TEC3 545 aa9.46□□□□□ -0.9
NPHP3-205ENST00000471145 PRPF38BQ5VTL8 546 aaKnown RBP9.46□□□□□ -0.9
NPHP3-205ENST00000471145 MYSM1Q5VVJ2 828 aa9.46□□□□□ -0.9
NPHP3-205ENST00000471145 KDM4CQ9H3R0 1056 aa9.46□□□□□ -0.9
NPHP3-205ENST00000471145 PCDHB15Q9Y5E8 787 aa9.46□□□□□ -0.9
NPHP3-205ENST00000471145 PRR20EP86478 221 aa9.44□□□□□ -0.9
NPHP3-205ENST00000471145 PRR20CP86479 221 aa9.44□□□□□ -0.9
NPHP3-205ENST00000471145 PRR20DP86480 221 aa9.44□□□□□ -0.9
NPHP3-205ENST00000471145 PRR20BP86481 221 aa9.44□□□□□ -0.9
NPHP3-205ENST00000471145 PRR20AP86496 221 aa9.44□□□□□ -0.9
NPHP3-205ENST00000471145 DESI1Q6ICB0 168 aa9.44□□□□□ -0.9
NPHP3-205ENST00000471145 PRR7Q8TB68 274 aa9.44□□□□□ -0.9
NPHP3-205ENST00000471145 ZBTB3Q9H5J0 574 aa9.44□□□□□ -0.9
NPHP3-205ENST00000471145 TRIM67Q6ZTA4 783 aa9.43□□□□□ -0.9
NPHP3-205ENST00000471145 DDRGK1Q96HY6 314 aa9.43□□□□□ -0.9
NPHP3-205ENST00000471145 NISCHQ9Y2I1 1504 aa9.42□□□□□ -0.9
NPHP3-205ENST00000471145 GDF9O60383 454 aa9.42□□□□□ -0.9
NPHP3-205ENST00000471145 HRCP23327 699 aa9.42□□□□□ -0.9
NPHP3-205ENST00000471145 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
NPHP3-205ENST00000471145 IL27Q8NEV9 243 aa9.42□□□□□ -0.9
NPHP3-205ENST00000471145 Q6ZNB5 142 aa9.41□□□□□ -0.9
NPHP3-205ENST00000471145 NUDT12Q9BQG2 462 aa9.41□□□□□ -0.9
NPHP3-205ENST00000471145 LIMD1Q9UGP4 676 aa9.41□□□□□ -0.9
NPHP3-205ENST00000471145 TRIM32Q13049 653 aa9.4□□□□□ -0.9
NPHP3-205ENST00000471145 PTPRNQ16849 979 aa9.4□□□□□ -0.9
NPHP3-205ENST00000471145 FAM117AQ9C073 453 aa9.4□□□□□ -0.9
NPHP3-205ENST00000471145 LILRB3O75022 631 aa9.39□□□□□ -0.91
NPHP3-205ENST00000471145 CLK2P49760 499 aaKnown RBP9.39□□□□□ -0.91
NPHP3-205ENST00000471145 EVA1BQ9NVM1 165 aa9.39□□□□□ -0.91
NPHP3-205ENST00000471145 PKD2L1Q9P0L9 805 aa9.39□□□□□ -0.91
NPHP3-205ENST00000471145 CCNYL3P0C7X3 344 aa9.38□□□□□ -0.91
NPHP3-205ENST00000471145 SKIV2LQ15477 1246 aaKnown RBP9.38□□□□□ -0.91
NPHP3-205ENST00000471145 CSPP1Q1MSJ5 1256 aa9.38□□□□□ -0.91
NPHP3-205ENST00000471145 POLR3EQ9NVU0 708 aa9.38□□□□□ -0.91
NPHP3-205ENST00000471145 NUTM2BA6NNL0 878 aaPredicted RBP9.37□□□□□ -0.91
NPHP3-205ENST00000471145 NUTM2EB1AL46 878 aaPredicted RBP9.37□□□□□ -0.91
NPHP3-205ENST00000471145 CFAP99D6REC4 459 aa9.37□□□□□ -0.91
NPHP3-205ENST00000471145 FOXC1Q12948 553 aa9.37□□□□□ -0.91
NPHP3-205ENST00000471145 SH3D19Q5HYK7 790 aa9.37□□□□□ -0.91
NPHP3-205ENST00000471145 NUTM2DQ5VT03 806 aaPredicted RBP9.37□□□□□ -0.91
NPHP3-205ENST00000471145 LYPD8Q6UX82 237 aa9.37□□□□□ -0.91
NPHP3-205ENST00000471145 NUTM2AQ8IVF1 878 aaPredicted RBP9.37□□□□□ -0.91
NPHP3-205ENST00000471145 CABLES1Q8TDN4 633 aa9.37□□□□□ -0.91
NPHP3-205ENST00000471145 QPCTQ16769 361 aa9.36□□□□□ -0.91
NPHP3-205ENST00000471145 PTCRAQ6ISU1 281 aaPredicted RBP9.36□□□□□ -0.91
NPHP3-205ENST00000471145 PLEKHG3A1L390 1219 aa9.35□□□□□ -0.91
NPHP3-205ENST00000471145 TNFRSF10AO00220 468 aa9.35□□□□□ -0.91
NPHP3-205ENST00000471145 WNT7AO00755 349 aa9.35□□□□□ -0.91
NPHP3-205ENST00000471145 WNT7BP56706 349 aa9.35□□□□□ -0.91
NPHP3-205ENST00000471145 KCNH2Q12809 1159 aa9.35□□□□□ -0.91
NPHP3-205ENST00000471145 TRAF7Q6Q0C0 670 aa9.35□□□□□ -0.91
NPHP3-205ENST00000471145 DGAT1O75907 488 aa9.34□□□□□ -0.91
NPHP3-205ENST00000471145 C14orf37Q86TY3 774 aa9.34□□□□□ -0.91
NPHP3-205ENST00000471145 RTL5Q5HYW3 569 aaPredicted RBP9.32□□□□□ -0.92
NPHP3-205ENST00000471145 TOR4AQ9NXH8 423 aa9.32□□□□□ -0.92
NPHP3-205ENST00000471145 PKDCCQ504Y2 493 aa9.31□□□□□ -0.92
NPHP3-205ENST00000471145 CYP4X1Q8N118 509 aa9.31□□□□□ -0.92
NPHP3-205ENST00000471145 UNC93B1Q9H1C4 597 aa9.31□□□□□ -0.92
NPHP3-205ENST00000471145 GOPCQ9HD26 462 aa9.31□□□□□ -0.92
NPHP3-205ENST00000471145 SKOR1P84550 965 aa9.3□□□□□ -0.92
NPHP3-205ENST00000471145 RC3H1Q5TC82 1133 aaKnown RBP9.3□□□□□ -0.92
NPHP3-205ENST00000471145 HELBQ8NG08 1087 aaPredicted RBP9.3□□□□□ -0.92
NPHP3-205ENST00000471145 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms