RNA–Protein interactions for RNA: ENST00000470347.1

SYPL1-205, Transcript of synaptophysin like 1, humanhuman

TSL 3 BASIC

Gene SYPL1, Length 1,193 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-205ENST00000470347 ST8SIA5O15466 376 aa11.72□□□□□ -0.53
SYPL1-205ENST00000470347 PRDM9Q9NQV7 894 aa11.72□□□□□ -0.53
SYPL1-205ENST00000470347 TOR4AQ9NXH8 423 aa11.72□□□□□ -0.53
SYPL1-205ENST00000470347 MSS51Q4VC12 460 aa11.71□□□□□ -0.53
SYPL1-205ENST00000470347 CRIPAKQ8N1N5 446 aa11.71□□□□□ -0.53
SYPL1-205ENST00000470347 RNF19BQ6ZMZ0 732 aa11.7□□□□□ -0.54
SYPL1-205ENST00000470347 AVPP01185 164 aa11.69□□□□□ -0.54
SYPL1-205ENST00000470347 GRIPAP1Q4V328 841 aa11.69□□□□□ -0.54
SYPL1-205ENST00000470347 CD46P15529 392 aa11.66□□□□□ -0.54
SYPL1-205ENST00000470347 CYP4X1Q8N118 509 aa11.66□□□□□ -0.54
SYPL1-205ENST00000470347 ZBTB24O43167 697 aaPredicted RBP11.64□□□□□ -0.55
SYPL1-205ENST00000470347 Q3C1V9 767 aa11.64□□□□□ -0.55
SYPL1-205ENST00000470347 MMP16P51512 607 aa11.63□□□□□ -0.55
SYPL1-205ENST00000470347 MAP2K5Q13163 448 aa11.63□□□□□ -0.55
SYPL1-205ENST00000470347 DACH1Q9UI36 760 aa11.63□□□□□ -0.55
SYPL1-205ENST00000470347 KDM2AQ9Y2K7 1162 aa11.63□□□□□ -0.55
SYPL1-205ENST00000470347 CTC1Q2NKJ3 1217 aa11.62□□□□□ -0.55
SYPL1-205ENST00000470347 SMCPP49901 116 aaPredicted RBP11.61□□□□□ -0.55
SYPL1-205ENST00000470347 LCE2AQ5TA79 106 aaPredicted RBP11.61□□□□□ -0.55
SYPL1-205ENST00000470347 WNT7AO00755 349 aa11.6□□□□□ -0.55
SYPL1-205ENST00000470347 AXIN1O15169 862 aa11.6□□□□□ -0.55
SYPL1-205ENST00000470347 HAP1P54257 671 aaPredicted RBP11.6□□□□□ -0.55
SYPL1-205ENST00000470347 IRF6O14896 467 aa11.59□□□□□ -0.55
SYPL1-205ENST00000470347 KDM4AO75164 1064 aa11.59□□□□□ -0.55
SYPL1-205ENST00000470347 TTC24A2A3L6 582 aaPredicted RBP11.58□□□□□ -0.56
SYPL1-205ENST00000470347 TRIM32Q13049 653 aa11.58□□□□□ -0.56
SYPL1-205ENST00000470347 TREML4Q6UXN2 200 aa11.58□□□□□ -0.56
SYPL1-205ENST00000470347 USB1Q9BQ65 265 aaKnown RBP11.58□□□□□ -0.56
SYPL1-205ENST00000470347 CUX2O14529 1486 aa11.57□□□□□ -0.56
SYPL1-205ENST00000470347 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
SYPL1-205ENST00000470347 DXOO77932 396 aaKnown RBP11.57□□□□□ -0.56
SYPL1-205ENST00000470347 USP46P62068 366 aa11.56□□□□□ -0.56
SYPL1-205ENST00000470347 SNIP1Q8TAD8 396 aaKnown RBP11.56□□□□□ -0.56
SYPL1-205ENST00000470347 GMPR2Q9P2T1 348 aaKnown RBP11.56□□□□□ -0.56
SYPL1-205ENST00000470347 MINK1Q8N4C8 1332 aaPredicted RBP11.56□□□□□ -0.56
SYPL1-205ENST00000470347 SMPD1P17405 629 aa11.55□□□□□ -0.56
SYPL1-205ENST00000470347 MDM2Q00987 491 aaPredicted RBP11.55□□□□□ -0.56
SYPL1-205ENST00000470347 HMGXB3Q12766 1538 aa11.55□□□□□ -0.56
SYPL1-205ENST00000470347 SMARCA4P51532 1647 aa11.53□□□□□ -0.56
SYPL1-205ENST00000470347 ATAD2BQ9ULI0 1458 aa11.53□□□□□ -0.56
SYPL1-205ENST00000470347 HLA-CQ95604 372 aa11.53□□□□□ -0.56
SYPL1-205ENST00000470347 MRGPRX2Q96LB1 330 aa11.53□□□□□ -0.56
SYPL1-205ENST00000470347 ERCC6Q03468 1493 aa11.52□□□□□ -0.56
SYPL1-205ENST00000470347 C11orf95C9JLR9 678 aaPredicted RBP11.52□□□□□ -0.57
SYPL1-205ENST00000470347 HOXA2O43364 376 aa11.52□□□□□ -0.57
SYPL1-205ENST00000470347 SMARCA2P51531 1590 aa11.51□□□□□ -0.57
SYPL1-205ENST00000470347 TULP1O00294 542 aaPredicted RBP11.51□□□□□ -0.57
SYPL1-205ENST00000470347 J3QL48 77 aa11.49□□□□□ -0.57
SYPL1-205ENST00000470347 CCDC102AQ96A19 550 aa11.49□□□□□ -0.57
SYPL1-205ENST00000470347 REPIN1Q9BWE0 567 aaKnown RBP11.49□□□□□ -0.57
SYPL1-205ENST00000470347 GPCPD1Q9NPB8 672 aa11.48□□□□□ -0.57
SYPL1-205ENST00000470347 SKOR1P84550 965 aa11.47□□□□□ -0.57
SYPL1-205ENST00000470347 CCDC24Q8N4L8 307 aa11.47□□□□□ -0.57
SYPL1-205ENST00000470347 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
SYPL1-205ENST00000470347 WNT7BP56706 349 aa11.46□□□□□ -0.57
SYPL1-205ENST00000470347 GUCA2AQ02747 115 aa11.46□□□□□ -0.57
SYPL1-205ENST00000470347 ATP13A2Q9NQ11 1180 aa11.46□□□□□ -0.57
SYPL1-205ENST00000470347 WFS1O76024 890 aa11.45□□□□□ -0.58
SYPL1-205ENST00000470347 CLCN1P35523 988 aa11.45□□□□□ -0.58
SYPL1-205ENST00000470347 RC3H1Q5TC82 1133 aaKnown RBP11.45□□□□□ -0.58
SYPL1-205ENST00000470347 BAZ1AQ9NRL2 1556 aaPredicted RBP11.45□□□□□ -0.58
SYPL1-205ENST00000470347 JUNDP17535 347 aa11.44□□□□□ -0.58
SYPL1-205ENST00000470347 NFX1Q12986 1120 aaKnown RBP11.44□□□□□ -0.58
SYPL1-205ENST00000470347 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
SYPL1-205ENST00000470347 VSIG10Q8N0Z9 540 aa11.43□□□□□ -0.58
SYPL1-205ENST00000470347 SYMPKQ92797 1274 aaKnown RBP11.43□□□□□ -0.58
SYPL1-205ENST00000470347 HPS1Q92902 700 aa11.43□□□□□ -0.58
SYPL1-205ENST00000470347 BAZ1BQ9UIG0 1483 aaKnown RBP11.43□□□□□ -0.58
SYPL1-205ENST00000470347 NESP48681 1621 aa11.42□□□□□ -0.58
SYPL1-205ENST00000470347 THOC2Q8NI27 1593 aaKnown RBP11.41□□□□□ -0.58
SYPL1-205ENST00000470347 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
SYPL1-205ENST00000470347 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
SYPL1-205ENST00000470347 SNRPBP14678 240 aaKnown RBP11.4□□□□□ -0.58
SYPL1-205ENST00000470347 NUTM1Q86Y26 1132 aa11.4□□□□□ -0.58
SYPL1-205ENST00000470347 SENP2Q9HC62 589 aa11.4□□□□□ -0.58
SYPL1-205ENST00000470347 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
SYPL1-205ENST00000470347 PTCRAQ6ISU1 281 aaPredicted RBP11.37□□□□□ -0.59
SYPL1-205ENST00000470347 PCDHGC3Q9UN70 934 aa11.37□□□□□ -0.59
SYPL1-205ENST00000470347 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
SYPL1-205ENST00000470347 SIAH2O43255 324 aa11.36□□□□□ -0.59
SYPL1-205ENST00000470347 WIPF1O43516 503 aa11.36□□□□□ -0.59
SYPL1-205ENST00000470347 KRI1Q8N9T8 703 aaKnown RBP11.36□□□□□ -0.59
SYPL1-205ENST00000470347 ALDH1A1P00352 501 aa11.35□□□□□ -0.59
SYPL1-205ENST00000470347 FDX1P10109 184 aa11.35□□□□□ -0.59
SYPL1-205ENST00000470347 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
SYPL1-205ENST00000470347 KIFC2Q96AC6 838 aa11.35□□□□□ -0.59
SYPL1-205ENST00000470347 SLC24A1O60721 1099 aa11.34□□□□□ -0.59
SYPL1-205ENST00000470347 TERTO14746 1132 aaKnown RBP11.33□□□□□ -0.6
SYPL1-205ENST00000470347 LCE2CQ5TA81 110 aa11.33□□□□□ -0.6
SYPL1-205ENST00000470347 KIF21AQ7Z4S6 1674 aa11.33□□□□□ -0.6
SYPL1-205ENST00000470347 MROH2BQ7Z745 1585 aa11.33□□□□□ -0.6
SYPL1-205ENST00000470347 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
SYPL1-205ENST00000470347 SSTR3P32745 418 aaPredicted RBP11.32□□□□□ -0.6
SYPL1-205ENST00000470347 EHBP1Q8NDI1 1231 aa11.32□□□□□ -0.6
SYPL1-205ENST00000470347 SPIRE2Q8WWL2 714 aa11.32□□□□□ -0.6
SYPL1-205ENST00000470347 CCNYL3P0C7X3 344 aa11.31□□□□□ -0.6
SYPL1-205ENST00000470347 MS4A1P11836 297 aa11.31□□□□□ -0.6
SYPL1-205ENST00000470347 SH3BP2P78314 561 aa11.3□□□□□ -0.6
SYPL1-205ENST00000470347 PTPRNQ16849 979 aa11.29□□□□□ -0.6
SYPL1-205ENST00000470347 INSM1Q01101 510 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms