RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 NUDT7P0C024 238 aa7.58□□□□□ -1.2
GCFC2-205ENST00000470197 ZNF16P17020 682 aaPredicted RBP7.58□□□□□ -1.2
GCFC2-205ENST00000470197 DEPDC4Q8N2C3 294 aa7.58□□□□□ -1.2
GCFC2-205ENST00000470197 RBM46Q8TBY0 533 aaKnown RBP7.58□□□□□ -1.2
GCFC2-205ENST00000470197 CRTC2Q53ET0 693 aaPredicted RBP7.58□□□□□ -1.2
GCFC2-205ENST00000470197 SLC10A3P09131 477 aa7.57□□□□□ -1.2
GCFC2-205ENST00000470197 FAM69CQ0P6D2 419 aa7.57□□□□□ -1.2
GCFC2-205ENST00000470197 TMEM134Q9H6X4 195 aa7.57□□□□□ -1.2
GCFC2-205ENST00000470197 KDM4AO75164 1064 aa7.57□□□□□ -1.2
GCFC2-205ENST00000470197 IER5LQ5T953 404 aa7.57□□□□□ -1.2
GCFC2-205ENST00000470197 ZDHHC16Q969W1 377 aa7.57□□□□□ -1.2
GCFC2-205ENST00000470197 L3MBTL3Q96JM7 780 aaPredicted RBP7.57□□□□□ -1.2
GCFC2-205ENST00000470197 WWC1Q8IX03 1113 aa7.57□□□□□ -1.2
GCFC2-205ENST00000470197 RBM27Q9P2N5 1060 aaKnown RBP7.57□□□□□ -1.2
GCFC2-205ENST00000470197 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.55□□□□□ -1.2
GCFC2-205ENST00000470197 FDX1P10109 184 aa7.55□□□□□ -1.2
GCFC2-205ENST00000470197 WASHC4Q2M389 1173 aa7.55□□□□□ -1.2
GCFC2-205ENST00000470197 ZBTB3Q9H5J0 574 aa7.55□□□□□ -1.2
GCFC2-205ENST00000470197 FAM174AQ8TBP5 190 aa7.55□□□□□ -1.2
GCFC2-205ENST00000470197 PRPF38BQ5VTL8 546 aaKnown RBP7.54□□□□□ -1.2
GCFC2-205ENST00000470197 PROX2Q3B8N5 592 aa7.54□□□□□ -1.2
GCFC2-205ENST00000470197 MYT1LQ9UL68 1186 aa7.54□□□□□ -1.2
GCFC2-205ENST00000470197 PATL2C9JE40 543 aaKnown RBP7.53□□□□□ -1.2
GCFC2-205ENST00000470197 GJA5P36382 358 aa7.53□□□□□ -1.2
GCFC2-205ENST00000470197 RDH13Q8NBN7 331 aa7.53□□□□□ -1.2
GCFC2-205ENST00000470197 ATP9BO43861 1147 aa7.53□□□□□ -1.2
GCFC2-205ENST00000470197 SSFA2P28290 1259 aa7.53□□□□□ -1.2
GCFC2-205ENST00000470197 CERKQ8TCT0 537 aa7.53□□□□□ -1.2
GCFC2-205ENST00000470197 PDE4CQ08493 712 aa7.52□□□□□ -1.21
GCFC2-205ENST00000470197 PUS7Q96PZ0 661 aaKnown RBP7.52□□□□□ -1.21
GCFC2-205ENST00000470197 NOVA2Q9UNW9 492 aaKnown RBP7.51□□□□□ -1.21
GCFC2-205ENST00000470197 LGR5O75473 907 aa7.51□□□□□ -1.21
GCFC2-205ENST00000470197 FBXO45P0C2W1 286 aa7.51□□□□□ -1.21
GCFC2-205ENST00000470197 GCGRP47871 477 aa7.51□□□□□ -1.21
GCFC2-205ENST00000470197 ARSIQ5FYB1 569 aa7.51□□□□□ -1.21
GCFC2-205ENST00000470197 GIPC2Q8TF65 315 aa7.51□□□□□ -1.21
GCFC2-205ENST00000470197 C7P10643 843 aa7.51□□□□□ -1.21
GCFC2-205ENST00000470197 PRM3Q9NNZ6 103 aa7.51□□□□□ -1.21
GCFC2-205ENST00000470197 PNMA3Q9UL41 463 aa7.51□□□□□ -1.21
GCFC2-205ENST00000470197 MTMR2Q13614 643 aa7.5□□□□□ -1.21
GCFC2-205ENST00000470197 TATDN2Q93075 761 aa7.5□□□□□ -1.21
GCFC2-205ENST00000470197 KCNH2Q12809 1159 aa7.5□□□□□ -1.21
GCFC2-205ENST00000470197 SULF1Q8IWU6 871 aa7.5□□□□□ -1.21
GCFC2-205ENST00000470197 DNAJB2P25686 324 aa7.49□□□□□ -1.21
GCFC2-205ENST00000470197 NPAS4Q8IUM7 802 aa7.49□□□□□ -1.21
GCFC2-205ENST00000470197 NACADO15069 1562 aa7.49□□□□□ -1.21
GCFC2-205ENST00000470197 FUT2Q10981 343 aa7.49□□□□□ -1.21
GCFC2-205ENST00000470197 TSGA10IPQ3SY00 556 aa7.49□□□□□ -1.21
GCFC2-205ENST00000470197 USP17L3A6NCW0 530 aa7.48□□□□□ -1.21
GCFC2-205ENST00000470197 USP17L4A6NCW7 530 aa7.48□□□□□ -1.21
GCFC2-205ENST00000470197 SOWAHDA6NJG2 315 aa7.48□□□□□ -1.21
GCFC2-205ENST00000470197 USP17L2Q6R6M4 530 aa7.48□□□□□ -1.21
GCFC2-205ENST00000470197 USP17L1Q7RTZ2 530 aa7.48□□□□□ -1.21
GCFC2-205ENST00000470197 SEC24BO95487 1268 aa7.48□□□□□ -1.21
GCFC2-205ENST00000470197 SEMA3FQ13275 785 aa7.48□□□□□ -1.21
GCFC2-205ENST00000470197 BCL2L13Q9BXK5 485 aa7.48□□□□□ -1.21
GCFC2-205ENST00000470197 CAPN12Q6ZSI9 719 aa7.47□□□□□ -1.21
GCFC2-205ENST00000470197 GAS2L2Q8NHY3 880 aa7.47□□□□□ -1.21
GCFC2-205ENST00000470197 HSP90B1P14625 803 aaKnown RBP7.47□□□□□ -1.21
GCFC2-205ENST00000470197 RSPH4AQ5TD94 716 aa7.47□□□□□ -1.21
GCFC2-205ENST00000470197 ANO2Q9NQ90 1003 aa7.47□□□□□ -1.21
GCFC2-205ENST00000470197 ANKRD33BA6NCL7 494 aa7.46□□□□□ -1.22
GCFC2-205ENST00000470197 C6orf229H3BNL8 230 aa7.46□□□□□ -1.22
GCFC2-205ENST00000470197 PTK7Q13308 1070 aa7.46□□□□□ -1.22
GCFC2-205ENST00000470197 TCF3P15923 654 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 ELOAQ14241 798 aaKnown RBP7.45□□□□□ -1.22
GCFC2-205ENST00000470197 ECM1Q16610 540 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 C3orf67Q6ZVT6 689 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 LHX6Q9UPM6 363 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 RECKO95980 971 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L5A8MUK1 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 PPP1R3GB7ZBB8 358 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L15C9J2P7 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L10C9JJH3 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L13C9JLJ4 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L12C9JPN9 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L11C9JVI0 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L21D6R901 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L18D6R9N7 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L22D6RA61 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L17D6RBQ6 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L19D6RCP7 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L20D6RJB6 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 SMARCA5O60264 1052 aaPredicted RBP7.45□□□□□ -1.22
GCFC2-205ENST00000470197 USP17L24Q0WX57 530 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 OCSTAMPQ9BR26 566 aa7.45□□□□□ -1.22
GCFC2-205ENST00000470197 HOXB3P14651 431 aaPredicted RBP7.44□□□□□ -1.22
GCFC2-205ENST00000470197 CDK11BP21127 795 aaKnown RBP7.44□□□□□ -1.22
GCFC2-205ENST00000470197 MTMR3Q13615 1198 aa7.44□□□□□ -1.22
GCFC2-205ENST00000470197 CDK11AQ9UQ88 783 aaPredicted RBP7.44□□□□□ -1.22
GCFC2-205ENST00000470197 NCOA4Q13772 614 aa7.44□□□□□ -1.22
GCFC2-205ENST00000470197 HELBQ8NG08 1087 aaPredicted RBP7.44□□□□□ -1.22
GCFC2-205ENST00000470197 CLDN10P78369 228 aa7.44□□□□□ -1.22
GCFC2-205ENST00000470197 GPR153Q6NV75 609 aa7.44□□□□□ -1.22
GCFC2-205ENST00000470197 KIAA1024Q9UPX6 916 aa7.44□□□□□ -1.22
GCFC2-205ENST00000470197 CCER1Q8TC90 406 aaPredicted RBP7.43□□□□□ -1.22
GCFC2-205ENST00000470197 ZNF211Q13398 564 aaPredicted RBP7.43□□□□□ -1.22
GCFC2-205ENST00000470197 SLF2Q8IX21 1173 aa7.43□□□□□ -1.22
GCFC2-205ENST00000470197 CHMP4AQ9BY43 222 aa7.43□□□□□ -1.22
GCFC2-205ENST00000470197 TRIM6-TRIM34B2RNG4 842 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms