RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 AK9Q5TCS8 1911 aa10□□□□□ -0.81
TPM3-215ENST00000469717 AFAP1Q8N556 730 aa9.99□□□□□ -0.81
TPM3-215ENST00000469717 ITSN2Q9NZM3 1697 aa9.99□□□□□ -0.81
TPM3-215ENST00000469717 TARBP1Q13395 1621 aaKnown RBP9.99□□□□□ -0.81
TPM3-215ENST00000469717 CARD14Q9BXL6 1004 aa9.99□□□□□ -0.81
TPM3-215ENST00000469717 TPM2P07951 284 aa9.99□□□□□ -0.81
TPM3-215ENST00000469717 SSFA2P28290 1259 aa9.98□□□□□ -0.81
TPM3-215ENST00000469717 DDIT3P35638 169 aa9.98□□□□□ -0.81
TPM3-215ENST00000469717 XPCQ01831 940 aaPredicted RBP9.98□□□□□ -0.81
TPM3-215ENST00000469717 RWDD1Q9H446 243 aaPredicted RBP9.98□□□□□ -0.81
TPM3-215ENST00000469717 PBRM1Q86U86 1689 aa9.98□□□□□ -0.81
TPM3-215ENST00000469717 CLASP1Q7Z460 1538 aa9.98□□□□□ -0.81
TPM3-215ENST00000469717 AEBP2Q6ZN18 517 aaPredicted RBP9.98□□□□□ -0.81
TPM3-215ENST00000469717 HSP90AB1P08238 724 aaKnown RBP9.98□□□□□ -0.81
TPM3-215ENST00000469717 NASPP49321 788 aaPredicted RBP9.98□□□□□ -0.81
TPM3-215ENST00000469717 ADAMTS12P58397 1594 aa9.98□□□□□ -0.81
TPM3-215ENST00000469717 ASXL1Q8IXJ9 1541 aa9.98□□□□□ -0.81
TPM3-215ENST00000469717 TCP11L2Q8N4U5 519 aa9.98□□□□□ -0.81
TPM3-215ENST00000469717 JARID2Q92833 1246 aaPredicted RBP9.98□□□□□ -0.81
TPM3-215ENST00000469717 TSR2Q969E8 191 aaKnown RBP9.98□□□□□ -0.81
TPM3-215ENST00000469717 PIK3C2GO75747 1445 aa9.97□□□□□ -0.81
TPM3-215ENST00000469717 SAFB2Q14151 953 aaKnown RBP eCLIP9.97□□□□□ -0.81
TPM3-215ENST00000469717 CHAMP1Q96JM3 812 aa9.97□□□□□ -0.81
TPM3-215ENST00000469717 ABCC10Q5T3U5 1492 aa9.97□□□□□ -0.81
TPM3-215ENST00000469717 MYO5CQ9NQX4 1742 aa9.97□□□□□ -0.81
TPM3-215ENST00000469717 LNPKQ9C0E8 428 aa9.97□□□□□ -0.81
TPM3-215ENST00000469717 ZSCAN30Q86W11 494 aa9.96□□□□□ -0.82
TPM3-215ENST00000469717 ZHX1Q9UKY1 873 aaPredicted RBP9.96□□□□□ -0.82
TPM3-215ENST00000469717 FTSJ3Q8IY81 847 aaKnown RBP9.96□□□□□ -0.82
TPM3-215ENST00000469717 OFD1O75665 1012 aa9.95□□□□□ -0.82
TPM3-215ENST00000469717 NCLP19338 710 aaKnown RBP9.95□□□□□ -0.82
TPM3-215ENST00000469717 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
TPM3-215ENST00000469717 ABCC2Q92887 1545 aa9.95□□□□□ -0.82
TPM3-215ENST00000469717 RAB3GAP1Q15042 981 aa9.95□□□□□ -0.82
TPM3-215ENST00000469717 SPAG9O60271 1321 aaKnown RBP9.95□□□□□ -0.82
TPM3-215ENST00000469717 MSNP26038 577 aaKnown RBP9.95□□□□□ -0.82
TPM3-215ENST00000469717 ITPRIPQ8IWB1 547 aa9.95□□□□□ -0.82
TPM3-215ENST00000469717 GAS2L2Q8NHY3 880 aa9.95□□□□□ -0.82
TPM3-215ENST00000469717 RAPGEF3O95398 923 aa9.94□□□□□ -0.82
TPM3-215ENST00000469717 KIF2CQ99661 725 aa9.94□□□□□ -0.82
TPM3-215ENST00000469717 DDX49Q9Y6V7 483 aaKnown RBP9.94□□□□□ -0.82
TPM3-215ENST00000469717 CALD1Q05682 793 aaKnown RBP9.94□□□□□ -0.82
TPM3-215ENST00000469717 NCOA3Q9Y6Q9 1424 aa9.94□□□□□ -0.82
TPM3-215ENST00000469717 C14orf37Q86TY3 774 aa9.94□□□□□ -0.82
TPM3-215ENST00000469717 MPNDQ8N594 471 aa9.94□□□□□ -0.82
TPM3-215ENST00000469717 PKP1Q13835 747 aa9.93□□□□□ -0.82
TPM3-215ENST00000469717 GBP4Q96PP9 640 aa9.93□□□□□ -0.82
TPM3-215ENST00000469717 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.93□□□□□ -0.82
TPM3-215ENST00000469717 UQCRHLA0A096LP55 91 aa9.93□□□□□ -0.82
TPM3-215ENST00000469717 UQCRHP07919 91 aa9.93□□□□□ -0.82
TPM3-215ENST00000469717 CCDC173Q0VFZ6 552 aa9.93□□□□□ -0.82
TPM3-215ENST00000469717 TSC1Q92574 1164 aa9.93□□□□□ -0.82
TPM3-215ENST00000469717 TRIM27P14373 513 aa9.93□□□□□ -0.82
TPM3-215ENST00000469717 CAVIN1Q6NZI2 390 aaKnown RBP9.93□□□□□ -0.82
TPM3-215ENST00000469717 SMC5Q8IY18 1101 aa9.93□□□□□ -0.82
TPM3-215ENST00000469717 DZIP1LQ8IYY4 767 aaKnown RBP9.93□□□□□ -0.82
TPM3-215ENST00000469717 PPP1R9BQ96SB3 815 aa9.92□□□□□ -0.82
TPM3-215ENST00000469717 NINLQ9Y2I6 1382 aa9.92□□□□□ -0.82
TPM3-215ENST00000469717 RBM27Q9P2N5 1060 aaKnown RBP9.92□□□□□ -0.82
TPM3-215ENST00000469717 CCDC141Q6ZP82 1450 aa9.92□□□□□ -0.82
TPM3-215ENST00000469717 SMC4Q9NTJ3 1288 aa9.92□□□□□ -0.82
TPM3-215ENST00000469717 SHANK2Q9UPX8 1470 aa9.92□□□□□ -0.82
TPM3-215ENST00000469717 MYOM1P52179 1685 aa9.92□□□□□ -0.82
TPM3-215ENST00000469717 RBSNQ9H1K0 784 aa9.91□□□□□ -0.82
TPM3-215ENST00000469717 MCTP1Q6DN14 999 aa9.91□□□□□ -0.82
TPM3-215ENST00000469717 ZKSCAN2Q63HK3 967 aa9.91□□□□□ -0.82
TPM3-215ENST00000469717 ISY1Q9ULR0 285 aaKnown RBP9.91□□□□□ -0.82
TPM3-215ENST00000469717 BAG4O95429 457 aaKnown RBP9.9□□□□□ -0.82
TPM3-215ENST00000469717 RBM25P49756 843 aaKnown RBP9.9□□□□□ -0.82
TPM3-215ENST00000469717 EXOSC9Q06265 439 aaKnown RBP9.9□□□□□ -0.82
TPM3-215ENST00000469717 C1orf115Q9H7X2 142 aa9.9□□□□□ -0.82
TPM3-215ENST00000469717 STK26Q9P289 416 aa9.9□□□□□ -0.82
TPM3-215ENST00000469717 LAMC1P11047 1609 aa9.9□□□□□ -0.82
TPM3-215ENST00000469717 FAM177BA6PVY3 158 aa9.9□□□□□ -0.82
TPM3-215ENST00000469717 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.9□□□□□ -0.82
TPM3-215ENST00000469717 TMEM57Q8N5G2 664 aa9.9□□□□□ -0.82
TPM3-215ENST00000469717 SSH1Q8WYL5 1049 aa9.9□□□□□ -0.82
TPM3-215ENST00000469717 RUNDC1Q96C34 613 aa9.9□□□□□ -0.82
TPM3-215ENST00000469717 PRIM1P49642 420 aaKnown RBP9.9□□□□□ -0.83
TPM3-215ENST00000469717 CFAP70Q5T0N1 1121 aa9.9□□□□□ -0.83
TPM3-215ENST00000469717 SYNMO15061 1565 aa9.9□□□□□ -0.83
TPM3-215ENST00000469717 PLXNC1O60486 1568 aa9.89□□□□□ -0.83
TPM3-215ENST00000469717 MAGI1Q96QZ7 1491 aaPredicted RBP9.89□□□□□ -0.83
TPM3-215ENST00000469717 FOXD4L5Q5VV16 416 aaPredicted RBP9.89□□□□□ -0.83
TPM3-215ENST00000469717 FOXD4L4Q8WXT5 416 aaPredicted RBP9.89□□□□□ -0.83
TPM3-215ENST00000469717 SYNJ2O15056 1496 aa9.89□□□□□ -0.83
TPM3-215ENST00000469717 MTHFSP49914 203 aa9.89□□□□□ -0.83
TPM3-215ENST00000469717 MORC1Q86VD1 984 aa9.89□□□□□ -0.83
TPM3-215ENST00000469717 ANP32BQ92688 251 aaKnown RBP9.89□□□□□ -0.83
TPM3-215ENST00000469717 SNX21Q969T3 373 aa9.89□□□□□ -0.83
TPM3-215ENST00000469717 NOB1Q9ULX3 412 aaKnown RBP9.89□□□□□ -0.83
TPM3-215ENST00000469717 ZSCAN23Q3MJ62 389 aa9.88□□□□□ -0.83
TPM3-215ENST00000469717 RNF214Q8ND24 703 aa9.88□□□□□ -0.83
TPM3-215ENST00000469717 K7ELQ4 463 aaPredicted RBP9.88□□□□□ -0.83
TPM3-215ENST00000469717 CDCA8Q53HL2 280 aa9.88□□□□□ -0.83
TPM3-215ENST00000469717 HOMEZQ8IX15 550 aa9.88□□□□□ -0.83
TPM3-215ENST00000469717 SLC12A5Q9H2X9 1139 aa9.88□□□□□ -0.83
TPM3-215ENST00000469717 RNF17Q9BXT8 1623 aaKnown RBP9.88□□□□□ -0.83
TPM3-215ENST00000469717 EIF2AK4Q9P2K8 1649 aaKnown RBP9.88□□□□□ -0.83
TPM3-215ENST00000469717 SKOR2Q2VWA4 1001 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms