RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 MIA2Q96PC5 1412 aa8.59□□□□□ -1.04
CD46-212ENST00000469535 CT47A1Q5JQC4 288 aaPredicted RBP8.59□□□□□ -1.04
CD46-212ENST00000469535 RALYLQ86SE5 291 aaKnown RBP8.59□□□□□ -1.04
CD46-212ENST00000469535 THEMISQ8N1K5 641 aaPredicted RBP8.59□□□□□ -1.04
CD46-212ENST00000469535 CNNM1Q9NRU3 951 aa8.59□□□□□ -1.04
CD46-212ENST00000469535 ARHGAP5Q13017 1502 aa8.59□□□□□ -1.04
CD46-212ENST00000469535 PHF14O94880 888 aa8.58□□□□□ -1.04
CD46-212ENST00000469535 GAPVD1Q14C86 1478 aa8.58□□□□□ -1.04
CD46-212ENST00000469535 E9PSI1 815 aa8.58□□□□□ -1.04
CD46-212ENST00000469535 ODF2Q5BJF6 829 aa8.58□□□□□ -1.04
CD46-212ENST00000469535 ZFYVE27Q5T4F4 411 aa8.58□□□□□ -1.04
CD46-212ENST00000469535 PLEKHO1Q53GL0 409 aaPredicted RBP8.58□□□□□ -1.04
CD46-212ENST00000469535 AQRO60306 1485 aaKnown RBP eCLIP8.57□□□□□ -1.045e-23■■■■■ 36
CD46-212ENST00000469535 RNF20Q5VTR2 975 aa8.57□□□□□ -1.04
CD46-212ENST00000469535 DNAJC2Q99543 621 aaKnown RBP8.57□□□□□ -1.04
CD46-212ENST00000469535 RRP12Q5JTH9 1297 aaKnown RBP8.57□□□□□ -1.04
CD46-212ENST00000469535 ANKLE2Q86XL3 938 aa8.57□□□□□ -1.04
CD46-212ENST00000469535 API5Q9BZZ5 524 aaKnown RBP8.57□□□□□ -1.04
CD46-212ENST00000469535 TBC1D2BQ9UPU7 963 aa8.57□□□□□ -1.04
CD46-212ENST00000469535 SAFBQ15424 915 aaKnown RBP eCLIP8.57□□□□□ -1.046e-6■□□□□ 10.7
CD46-212ENST00000469535 RAD54L2Q9Y4B4 1467 aa8.56□□□□□ -1.04
CD46-212ENST00000469535 CC2D2AQ9P2K1 1620 aa8.56□□□□□ -1.04
CD46-212ENST00000469535 ANKRD20A12PQ8NF67 263 aa8.56□□□□□ -1.04
CD46-212ENST00000469535 PRDM11Q9NQV5 511 aa8.56□□□□□ -1.04
CD46-212ENST00000469535 AFAP1Q8N556 730 aa8.56□□□□□ -1.04
CD46-212ENST00000469535 UBTFL1P0CB47 393 aaPredicted RBP8.56□□□□□ -1.04
CD46-212ENST00000469535 ROCK1Q13464 1354 aa8.56□□□□□ -1.04
CD46-212ENST00000469535 USP47Q96K76 1375 aa8.56□□□□□ -1.04
CD46-212ENST00000469535 ADAMTS2O95450 1211 aa8.56□□□□□ -1.04
CD46-212ENST00000469535 EPS15P42566 896 aa8.56□□□□□ -1.04
CD46-212ENST00000469535 ZSCAN29Q8IWY8 852 aaPredicted RBP8.56□□□□□ -1.04
CD46-212ENST00000469535 BRMS1Q9HCU9 246 aa8.56□□□□□ -1.04
CD46-212ENST00000469535 ZNF644Q9H582 1327 aaPredicted RBP8.55□□□□□ -1.04
CD46-212ENST00000469535 ERC2O15083 957 aa8.55□□□□□ -1.04
CD46-212ENST00000469535 NAP1L1P55209 391 aaKnown RBP8.55□□□□□ -1.04
CD46-212ENST00000469535 TTC39AQ5SRH9 613 aa8.55□□□□□ -1.04
CD46-212ENST00000469535 PATL2C9JE40 543 aaKnown RBP8.55□□□□□ -1.04
CD46-212ENST00000469535 GNAI1P63096 354 aa8.55□□□□□ -1.04
CD46-212ENST00000469535 BICD2Q8TD16 824 aa8.55□□□□□ -1.04
CD46-212ENST00000469535 SLC26A8Q96RN1 970 aa8.55□□□□□ -1.04
CD46-212ENST00000469535 ATP6V1DQ9Y5K8 247 aa8.55□□□□□ -1.04
CD46-212ENST00000469535 GOLGA6L3A6NEY3 463 aa8.55□□□□□ -1.04
CD46-212ENST00000469535 IPO7O95373 1038 aaKnown RBP8.55□□□□□ -1.04
CD46-212ENST00000469535 HSP90AB4PQ58FF6 505 aa8.55□□□□□ -1.04
CD46-212ENST00000469535 VPS37CA5D8V6 355 aaPredicted RBP8.54□□□□□ -1.04
CD46-212ENST00000469535 FAM161AQ3B820 660 aa8.54□□□□□ -1.04
CD46-212ENST00000469535 PRAM1Q96QH2 718 aa8.54□□□□□ -1.04
CD46-212ENST00000469535 HOOK1Q9UJC3 728 aaKnown RBP8.54□□□□□ -1.04
CD46-212ENST00000469535 CFTRP13569 1480 aa8.54□□□□□ -1.04
CD46-212ENST00000469535 MYL6BP14649 208 aa8.54□□□□□ -1.04
CD46-212ENST00000469535 SLC3A2P08195 630 aaKnown RBP8.54□□□□□ -1.04
CD46-212ENST00000469535 GNL3LQ9NVN8 582 aaKnown RBP8.54□□□□□ -1.04
CD46-212ENST00000469535 MYCNP04198 464 aaPredicted RBP8.54□□□□□ -1.04
CD46-212ENST00000469535 DDX19BQ9UMR2 479 aa8.54□□□□□ -1.04
CD46-212ENST00000469535 CHMP4BP1P59074 171 aa8.54□□□□□ -1.04
CD46-212ENST00000469535 FSD1Q9BTV5 496 aa8.53□□□□□ -1.04
CD46-212ENST00000469535 MPHOSPH10O00566 681 aaKnown RBP8.53□□□□□ -1.04
CD46-212ENST00000469535 DZIP1LQ8IYY4 767 aaKnown RBP8.53□□□□□ -1.04
CD46-212ENST00000469535 RUNDC1Q96C34 613 aa8.53□□□□□ -1.04
CD46-212ENST00000469535 CRBNQ96SW2 442 aa8.53□□□□□ -1.04
CD46-212ENST00000469535 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
CD46-212ENST00000469535 REC8O95072 547 aa8.53□□□□□ -1.04
CD46-212ENST00000469535 TTLL12Q14166 644 aaPredicted RBP8.53□□□□□ -1.04
CD46-212ENST00000469535 CCDC70Q6NSX1 233 aa8.53□□□□□ -1.04
CD46-212ENST00000469535 ZNF219Q9P2Y4 722 aaPredicted RBP8.53□□□□□ -1.04
CD46-212ENST00000469535 MRC2Q9UBG0 1479 aa8.53□□□□□ -1.04
CD46-212ENST00000469535 XBP1P17861 261 aa8.53□□□□□ -1.04
CD46-212ENST00000469535 ATP2B1P20020 1258 aa8.52□□□□□ -1.04
CD46-212ENST00000469535 GAS2L2Q8NHY3 880 aa8.52□□□□□ -1.04
CD46-212ENST00000469535 ZC3H6P61129 1189 aaKnown RBP8.52□□□□□ -1.04
CD46-212ENST00000469535 FGD5Q6ZNL6 1462 aa8.52□□□□□ -1.05
CD46-212ENST00000469535 SART3Q15020 963 aaKnown RBP8.52□□□□□ -1.05
CD46-212ENST00000469535 CCDC30Q5VVM6 783 aa8.52□□□□□ -1.05
CD46-212ENST00000469535 CDK5RAP3Q96JB5 506 aa8.52□□□□□ -1.05
CD46-212ENST00000469535 MPHOSPH8Q99549 860 aa8.52□□□□□ -1.05
CD46-212ENST00000469535 SPINK5Q9NQ38 1064 aaPredicted RBP8.52□□□□□ -1.05
CD46-212ENST00000469535 MTHFSP49914 203 aa8.51□□□□□ -1.05
CD46-212ENST00000469535 KRT18P05783 430 aaKnown RBP8.51□□□□□ -1.05
CD46-212ENST00000469535 POGZQ7Z3K3 1410 aa8.51□□□□□ -1.05
CD46-212ENST00000469535 RAPGEF3O95398 923 aa8.51□□□□□ -1.05
CD46-212ENST00000469535 ZNF592Q92610 1267 aa8.51□□□□□ -1.05
CD46-212ENST00000469535 DDX49Q9Y6V7 483 aaKnown RBP8.51□□□□□ -1.05
CD46-212ENST00000469535 PRG4Q92954 1404 aaPredicted RBP8.51□□□□□ -1.05
CD46-212ENST00000469535 ZNF530Q6P9A1 599 aaPredicted RBP8.51□□□□□ -1.05
CD46-212ENST00000469535 SMC3Q9UQE7 1217 aa8.51□□□□□ -1.05
CD46-212ENST00000469535 CCDC158Q5M9N0 1113 aa8.51□□□□□ -1.05
CD46-212ENST00000469535 SIL1Q9H173 461 aa8.51□□□□□ -1.05
CD46-212ENST00000469535 HSP90AB2PQ58FF8 381 aa8.51□□□□□ -1.05
CD46-212ENST00000469535 NGLY1Q96IV0 654 aa8.5□□□□□ -1.05
CD46-212ENST00000469535 OFD1O75665 1012 aa8.5□□□□□ -1.05
CD46-212ENST00000469535 CENPQQ7L2Z9 268 aaPredicted RBP8.5□□□□□ -1.05
CD46-212ENST00000469535 CDK19Q9BWU1 502 aa8.5□□□□□ -1.05
CD46-212ENST00000469535 SURF6O75683 361 aaKnown RBP8.5□□□□□ -1.05
CD46-212ENST00000469535 CFAP70Q5T0N1 1121 aa8.5□□□□□ -1.05
CD46-212ENST00000469535 NINLQ9Y2I6 1382 aa8.5□□□□□ -1.05
CD46-212ENST00000469535 MYOM3Q5VTT5 1437 aa8.5□□□□□ -1.05
CD46-212ENST00000469535 DEKP35659 375 aaKnown RBP8.49□□□□□ -1.05
CD46-212ENST00000469535 CCDC85AQ96PX6 553 aaPredicted RBP8.49□□□□□ -1.05
CD46-212ENST00000469535 LNPKQ9C0E8 428 aa8.49□□□□□ -1.05
CD46-212ENST00000469535 RBM19Q9Y4C8 960 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms