RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 LAMC1P11047 1609 aa16.85■□□□□ 0.29
TRAIP-202ENST00000469027 NALCNQ8IZF0 1738 aa16.85■□□□□ 0.29
TRAIP-202ENST00000469027 ZNF784Q8NCA9 323 aaPredicted RBP16.84■□□□□ 0.29
TRAIP-202ENST00000469027 C1QTNF8P60827 252 aa16.81■□□□□ 0.28
TRAIP-202ENST00000469027 CROCC2H7BZ55 1655 aa16.8■□□□□ 0.28
TRAIP-202ENST00000469027 SLIT2O94813 1529 aa16.8■□□□□ 0.28
TRAIP-202ENST00000469027 XPCQ01831 940 aaPredicted RBP16.79■□□□□ 0.28
TRAIP-202ENST00000469027 NPHP3Q7Z494 1330 aa16.78■□□□□ 0.28
TRAIP-202ENST00000469027 METP08581 1390 aa16.77■□□□□ 0.28
TRAIP-202ENST00000469027 RGPD1P0DJD0 1748 aa16.77■□□□□ 0.28
TRAIP-202ENST00000469027 EZH2Q15910 746 aaKnown RBP16.77■□□□□ 0.28
TRAIP-202ENST00000469027 CHIC2Q9UKJ5 165 aa16.77■□□□□ 0.28
TRAIP-202ENST00000469027 ABCC5O15440 1437 aa16.77■□□□□ 0.27
TRAIP-202ENST00000469027 HAP1P54257 671 aaPredicted RBP16.76■□□□□ 0.27
TRAIP-202ENST00000469027 VPS72Q15906 364 aa16.76■□□□□ 0.27
TRAIP-202ENST00000469027 ANKRD30AQ9BXX3 1397 aa16.75■□□□□ 0.27
TRAIP-202ENST00000469027 NRXN3Q9Y4C0 1643 aa16.74■□□□□ 0.27
TRAIP-202ENST00000469027 ESCO1Q5FWF5 840 aa16.74■□□□□ 0.27
TRAIP-202ENST00000469027 NINLQ9Y2I6 1382 aa16.74■□□□□ 0.27
TRAIP-202ENST00000469027 FAM182BQ5T319 152 aa16.73■□□□□ 0.27
TRAIP-202ENST00000469027 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
TRAIP-202ENST00000469027 PTPN23Q9H3S7 1636 aa16.72■□□□□ 0.27
TRAIP-202ENST00000469027 ONECUT3O60422 494 aaPredicted RBP16.72■□□□□ 0.27
TRAIP-202ENST00000469027 SPON1Q9HCB6 807 aa16.72■□□□□ 0.27
TRAIP-202ENST00000469027 PXDNQ92626 1479 aa16.72■□□□□ 0.27
TRAIP-202ENST00000469027 DAPK1P53355 1430 aa16.71■□□□□ 0.27
TRAIP-202ENST00000469027 FOXO3O43524 673 aa16.71■□□□□ 0.27
TRAIP-202ENST00000469027 PLEKHG5O94827 1062 aa16.71■□□□□ 0.27
TRAIP-202ENST00000469027 FAM98CQ17RN3 349 aaKnown RBP16.7■□□□□ 0.26
TRAIP-202ENST00000469027 USP32Q8NFA0 1604 aa16.7■□□□□ 0.26
TRAIP-202ENST00000469027 DISP2A7MBM2 1401 aa16.7■□□□□ 0.26
TRAIP-202ENST00000469027 ZNF326Q5BKZ1 582 aaKnown RBP16.69■□□□□ 0.26
TRAIP-202ENST00000469027 ADGRL2O95490 1459 aa16.68■□□□□ 0.26
TRAIP-202ENST00000469027 ADGRB2O60241 1585 aa16.68■□□□□ 0.26
TRAIP-202ENST00000469027 KCNQ2O43526 872 aa16.67■□□□□ 0.26
TRAIP-202ENST00000469027 NBPF8Q3BBV2 869 aa16.67■□□□□ 0.26
TRAIP-202ENST00000469027 NBPF14Q5TI25 921 aa16.67■□□□□ 0.26
TRAIP-202ENST00000469027 TNS1Q9HBL0 1735 aaKnown RBP16.67■□□□□ 0.26
TRAIP-202ENST00000469027 LRPPRCP42704 1394 aaKnown RBP16.66■□□□□ 0.26
TRAIP-202ENST00000469027 PLCH1Q4KWH8 1693 aa16.66■□□□□ 0.26
TRAIP-202ENST00000469027 CAMKK2Q96RR4 588 aa16.66■□□□□ 0.26
TRAIP-202ENST00000469027 NWD2Q9ULI1 1742 aa16.64■□□□□ 0.25
TRAIP-202ENST00000469027 TRIM37O94972 964 aa16.63■□□□□ 0.25
TRAIP-202ENST00000469027 APBA3O96018 575 aa16.63■□□□□ 0.25
TRAIP-202ENST00000469027 ROBO2Q9HCK4 1378 aa16.63■□□□□ 0.25
TRAIP-202ENST00000469027 GIGYF1O75420 1035 aaPredicted RBP16.62■□□□□ 0.25
TRAIP-202ENST00000469027 IQGAP3Q86VI3 1631 aa16.62■□□□□ 0.25
TRAIP-202ENST00000469027 PARD3Q8TEW0 1356 aa16.62■□□□□ 0.25
TRAIP-202ENST00000469027 CEP350Q5VT06 3117 aa16.61■□□□□ 0.25
TRAIP-202ENST00000469027 NUTM2FA1L443 756 aa16.61■□□□□ 0.25
TRAIP-202ENST00000469027 KANK4Q5T7N3 995 aaPredicted RBP16.61■□□□□ 0.25
TRAIP-202ENST00000469027 CABLES1Q8TDN4 633 aa16.61■□□□□ 0.25
TRAIP-202ENST00000469027 E9PCH4 1651 aa16.61■□□□□ 0.25
TRAIP-202ENST00000469027 SPATA31A3Q5VYP0 1347 aa16.61■□□□□ 0.25
TRAIP-202ENST00000469027 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
TRAIP-202ENST00000469027 LMOD2Q6P5Q4 547 aa16.58■□□□□ 0.24
TRAIP-202ENST00000469027 CHD4Q14839 1912 aa16.58■□□□□ 0.24
TRAIP-202ENST00000469027 NUP188Q5SRE5 1749 aa16.56■□□□□ 0.24
TRAIP-202ENST00000469027 RREB1Q92766 1687 aa16.56■□□□□ 0.24
TRAIP-202ENST00000469027 HFM1A2PYH4 1435 aa16.55■□□□□ 0.24
TRAIP-202ENST00000469027 CCDC144AA2RUR9 1427 aa16.55■□□□□ 0.24
TRAIP-202ENST00000469027 FAM196AQ6ZSG2 479 aa16.55■□□□□ 0.24
TRAIP-202ENST00000469027 CDC42BPGQ6DT37 1551 aa16.55■□□□□ 0.24
TRAIP-202ENST00000469027 FAM83GA6ND36 823 aa16.54■□□□□ 0.24
TRAIP-202ENST00000469027 KRT28Q7Z3Y7 464 aa16.54■□□□□ 0.24
TRAIP-202ENST00000469027 BTG4Q9NY30 223 aa16.54■□□□□ 0.24
TRAIP-202ENST00000469027 UTRNP46939 3433 aa16.54■□□□□ 0.24
TRAIP-202ENST00000469027 NRKQ7Z2Y5 1582 aa16.53■□□□□ 0.24
TRAIP-202ENST00000469027 TNS3Q68CZ2 1445 aa16.52■□□□□ 0.23
TRAIP-202ENST00000469027 NRAPQ86VF7 1730 aa16.5■□□□□ 0.23
TRAIP-202ENST00000469027 THSD7AQ9UPZ6 1657 aa16.49■□□□□ 0.23
TRAIP-202ENST00000469027 SPATA31A5Q5VU36 1347 aa16.48■□□□□ 0.23
TRAIP-202ENST00000469027 SPATA31A7Q8IWB4 1347 aa16.48■□□□□ 0.23
TRAIP-202ENST00000469027 ABCA3Q99758 1704 aa16.48■□□□□ 0.23
TRAIP-202ENST00000469027 NAIPQ13075 1403 aa16.48■□□□□ 0.23
TRAIP-202ENST00000469027 PSME1Q06323 249 aa16.48■□□□□ 0.23
TRAIP-202ENST00000469027 NEXMIFQ5QGS0 1516 aa16.48■□□□□ 0.23
TRAIP-202ENST00000469027 KIF1AQ12756 1690 aa16.47■□□□□ 0.23
TRAIP-202ENST00000469027 MYOM1P52179 1685 aa16.46■□□□□ 0.23
TRAIP-202ENST00000469027 ZBTB7AO95365 584 aa16.46■□□□□ 0.23
TRAIP-202ENST00000469027 FHDC1Q9C0D6 1143 aaPredicted RBP16.46■□□□□ 0.23
TRAIP-202ENST00000469027 SYT17Q9BSW7 474 aa16.45■□□□□ 0.22
TRAIP-202ENST00000469027 ARHGEF10O15013 1369 aa16.45■□□□□ 0.22
TRAIP-202ENST00000469027 PRAG1Q86YV5 1406 aa16.45■□□□□ 0.22
TRAIP-202ENST00000469027 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
TRAIP-202ENST00000469027 PDE3BQ13370 1112 aa16.43■□□□□ 0.22
TRAIP-202ENST00000469027 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
TRAIP-202ENST00000469027 NUP155O75694 1391 aa16.42■□□□□ 0.22
TRAIP-202ENST00000469027 COL14A1Q05707 1796 aaKnown RBP16.42■□□□□ 0.22
TRAIP-202ENST00000469027 VGFO15240 615 aaPredicted RBP16.41■□□□□ 0.22
TRAIP-202ENST00000469027 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
TRAIP-202ENST00000469027 GPR162Q16538 588 aa16.4■□□□□ 0.22
TRAIP-202ENST00000469027 PHF8Q9UPP1 1060 aa16.4■□□□□ 0.22
TRAIP-202ENST00000469027 SBNO1A3KN83 1393 aa16.39■□□□□ 0.21
TRAIP-202ENST00000469027 CAPN15O75808 1086 aa16.39■□□□□ 0.21
TRAIP-202ENST00000469027 PTGER2P43116 358 aa16.39■□□□□ 0.21
TRAIP-202ENST00000469027 WAPLQ7Z5K2 1190 aa16.39■□□□□ 0.21
TRAIP-202ENST00000469027 PDGFDQ9GZP0 370 aaPredicted RBP16.39■□□□□ 0.21
TRAIP-202ENST00000469027 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.21
TRAIP-202ENST00000469027 STK26Q9P289 416 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms