RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 AXIN2Q9Y2T1 843 aa13.52□□□□□ -0.25
ITGA4-205ENST00000468948 CFHP08603 1231 aa13.51□□□□□ -0.25
ITGA4-205ENST00000468948 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
ITGA4-205ENST00000468948 TRIM34Q9BYJ4 488 aa13.51□□□□□ -0.25
ITGA4-205ENST00000468948 CFAP99D6REC4 459 aa13.5□□□□□ -0.25
ITGA4-205ENST00000468948 PPP1R15AO75807 674 aaPredicted RBP13.5□□□□□ -0.25
ITGA4-205ENST00000468948 HDGFL1Q5TGJ6 251 aa13.5□□□□□ -0.25
ITGA4-205ENST00000468948 LRRN4Q8WUT4 740 aa13.5□□□□□ -0.25
ITGA4-205ENST00000468948 RETREG2Q8NC44 543 aa13.49□□□□□ -0.25
ITGA4-205ENST00000468948 VPS9D1Q9Y2B5 631 aa13.49□□□□□ -0.25
ITGA4-205ENST00000468948 RNF40O75150 1001 aa13.48□□□□□ -0.25
ITGA4-205ENST00000468948 ATP6V1AP38606 617 aa13.48□□□□□ -0.25
ITGA4-205ENST00000468948 ACIN1Q9UKV3 1341 aaKnown RBP13.47□□□□□ -0.25
ITGA4-205ENST00000468948 LAPTM4BQ86VI4 370 aa13.47□□□□□ -0.25
ITGA4-205ENST00000468948 OTUD5Q96G74 571 aa13.47□□□□□ -0.25
ITGA4-205ENST00000468948 PBX2P40425 430 aa13.46□□□□□ -0.25
ITGA4-205ENST00000468948 SYMPKQ92797 1274 aaKnown RBP13.45□□□□□ -0.26
ITGA4-205ENST00000468948 NBPF3Q9H094 633 aa13.45□□□□□ -0.26
ITGA4-205ENST00000468948 GPR37L1O60883 481 aa13.44□□□□□ -0.26
ITGA4-205ENST00000468948 VAC14Q08AM6 782 aa13.44□□□□□ -0.26
ITGA4-205ENST00000468948 KMT5BQ4FZB7 885 aa13.44□□□□□ -0.26
ITGA4-205ENST00000468948 KCTD17Q8N5Z5 321 aa13.44□□□□□ -0.26
ITGA4-205ENST00000468948 PRR7Q8TB68 274 aa13.44□□□□□ -0.26
ITGA4-205ENST00000468948 ADAMTS19Q8TE59 1207 aa13.44□□□□□ -0.26
ITGA4-205ENST00000468948 EPS8L1Q8TE68 723 aa13.43□□□□□ -0.26
ITGA4-205ENST00000468948 AEBP1Q8IUX7 1158 aa13.41□□□□□ -0.26
ITGA4-205ENST00000468948 ZFRQ96KR1 1074 aaKnown RBP13.4□□□□□ -0.26
ITGA4-205ENST00000468948 BHMG1C9JSJ3 638 aaPredicted RBP13.39□□□□□ -0.27
ITGA4-205ENST00000468948 EMP3P54852 163 aa13.39□□□□□ -0.27
ITGA4-205ENST00000468948 NR6A1Q15406 480 aa13.39□□□□□ -0.27
ITGA4-205ENST00000468948 ZNF687Q8N1G0 1237 aa13.39□□□□□ -0.27
ITGA4-205ENST00000468948 RFX1P22670 979 aa13.38□□□□□ -0.27
ITGA4-205ENST00000468948 RETREG3Q86VR2 466 aa13.38□□□□□ -0.27
ITGA4-205ENST00000468948 PER1O15534 1290 aaPredicted RBP13.37□□□□□ -0.27
ITGA4-205ENST00000468948 MORN1Q5T089 497 aa13.37□□□□□ -0.27
ITGA4-205ENST00000468948 PBXIP1Q96AQ6 731 aa13.37□□□□□ -0.27
ITGA4-205ENST00000468948 ALG2Q9H553 416 aa13.37□□□□□ -0.27
ITGA4-205ENST00000468948 CCDC9Q9Y3X0 531 aaKnown RBP13.37□□□□□ -0.27
ITGA4-205ENST00000468948 PDE4CQ08493 712 aa13.36□□□□□ -0.27
ITGA4-205ENST00000468948 PUS10Q3MIT2 529 aaKnown RBP13.36□□□□□ -0.27
ITGA4-205ENST00000468948 ACTN4O43707 911 aaKnown RBP13.35□□□□□ -0.27
ITGA4-205ENST00000468948 ST18O60284 1047 aa13.35□□□□□ -0.27
ITGA4-205ENST00000468948 Q3C1V9 767 aa13.35□□□□□ -0.27
ITGA4-205ENST00000468948 CFAP70Q5T0N1 1121 aa13.35□□□□□ -0.27
ITGA4-205ENST00000468948 MRPL50Q8N5N7 158 aaKnown RBP13.35□□□□□ -0.27
ITGA4-205ENST00000468948 MARVELD3Q96A59 401 aa13.35□□□□□ -0.27
ITGA4-205ENST00000468948 PPP1R12CQ9BZL4 782 aa13.35□□□□□ -0.27
ITGA4-205ENST00000468948 SLC27A5Q9Y2P5 690 aa13.35□□□□□ -0.27
ITGA4-205ENST00000468948 FAM205CA6NFA0 338 aa13.34□□□□□ -0.27
ITGA4-205ENST00000468948 LRCH3Q96II8 777 aa13.34□□□□□ -0.27
ITGA4-205ENST00000468948 TK2O00142 265 aa13.33□□□□□ -0.28
ITGA4-205ENST00000468948 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.32□□□□□ -0.28
ITGA4-205ENST00000468948 SOX11P35716 441 aa13.32□□□□□ -0.28
ITGA4-205ENST00000468948 DESI1Q6ICB0 168 aa13.32□□□□□ -0.28
ITGA4-205ENST00000468948 PNMA1Q8ND90 353 aa13.32□□□□□ -0.28
ITGA4-205ENST00000468948 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.32□□□□□ -0.28
ITGA4-205ENST00000468948 RANGAP1P46060 587 aaPredicted RBP13.31□□□□□ -0.28
ITGA4-205ENST00000468948 PALM3A6NDB9 673 aaPredicted RBP13.3□□□□□ -0.28
ITGA4-205ENST00000468948 SEMA3FQ13275 785 aa13.3□□□□□ -0.28
ITGA4-205ENST00000468948 PRR14Q9BWN1 585 aa13.3□□□□□ -0.28
ITGA4-205ENST00000468948 LYPD8Q6UX82 237 aa13.29□□□□□ -0.28
ITGA4-205ENST00000468948 LMOD1P29536 600 aaPredicted RBP13.28□□□□□ -0.28
ITGA4-205ENST00000468948 SRPK2P78362 688 aaKnown RBP13.28□□□□□ -0.28
ITGA4-205ENST00000468948 TFIP11Q9UBB9 837 aaKnown RBP13.28□□□□□ -0.28
ITGA4-205ENST00000468948 CSB-PGBD3P0DP91 1061 aa13.27□□□□□ -0.29
ITGA4-205ENST00000468948 NPM2Q86SE8 214 aaKnown RBP13.27□□□□□ -0.29
ITGA4-205ENST00000468948 EIF4G2P78344 907 aaKnown RBP eCLIP13.26□□□□□ -0.29
ITGA4-205ENST00000468948 BLOC1S3Q6QNY0 202 aa13.26□□□□□ -0.29
ITGA4-205ENST00000468948 RNF19BQ6ZMZ0 732 aa13.26□□□□□ -0.29
ITGA4-205ENST00000468948 UCN2Q96RP3 112 aa13.26□□□□□ -0.29
ITGA4-205ENST00000468948 ADGRD1Q6QNK2 874 aa13.25□□□□□ -0.29
ITGA4-205ENST00000468948 USB1Q9BQ65 265 aaKnown RBP13.25□□□□□ -0.29
ITGA4-205ENST00000468948 GOLGA8CPA6NN73 597 aa13.23□□□□□ -0.29
ITGA4-205ENST00000468948 PPP4CP60510 307 aa13.23□□□□□ -0.29
ITGA4-205ENST00000468948 BRICD5Q6PL45 260 aa13.23□□□□□ -0.29
ITGA4-205ENST00000468948 STAC3Q96MF2 364 aa13.23□□□□□ -0.29
ITGA4-205ENST00000468948 HS3ST6Q96QI5 342 aa13.23□□□□□ -0.29
ITGA4-205ENST00000468948 USTQ9Y2C2 406 aa13.23□□□□□ -0.29
ITGA4-205ENST00000468948 LSM11P83369 360 aaKnown RBP eCLIP13.22□□□□□ -0.29
ITGA4-205ENST00000468948 NR1H3Q13133 447 aa13.22□□□□□ -0.29
ITGA4-205ENST00000468948 LHX8Q68G74 356 aa13.22□□□□□ -0.29
ITGA4-205ENST00000468948 ANKK1Q8NFD2 765 aa13.22□□□□□ -0.29
ITGA4-205ENST00000468948 SALL2Q9Y467 1007 aaPredicted RBP13.22□□□□□ -0.29
ITGA4-205ENST00000468948 GZF1Q9H116 711 aaPredicted RBP13.21□□□□□ -0.29
ITGA4-205ENST00000468948 HPS5Q9UPZ3 1129 aa13.21□□□□□ -0.29
ITGA4-205ENST00000468948 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
ITGA4-205ENST00000468948 HRO43593 1189 aa13.2□□□□□ -0.3
ITGA4-205ENST00000468948 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
ITGA4-205ENST00000468948 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
ITGA4-205ENST00000468948 SCUBE3Q8IX30 993 aa13.2□□□□□ -0.3
ITGA4-205ENST00000468948 FMNL1O95466 1100 aaPredicted RBP13.19□□□□□ -0.3
ITGA4-205ENST00000468948 APLP1P51693 650 aa13.19□□□□□ -0.3
ITGA4-205ENST00000468948 TBC1D9Q6ZT07 1266 aa13.19□□□□□ -0.3
ITGA4-205ENST00000468948 FKBPLQ9UIM3 349 aa13.19□□□□□ -0.3
ITGA4-205ENST00000468948 MAFBQ9Y5Q3 323 aaPredicted RBP13.19□□□□□ -0.3
ITGA4-205ENST00000468948 SOWAHBA6NEL2 793 aa13.18□□□□□ -0.3
ITGA4-205ENST00000468948 ZBBXA8MT70 800 aa13.18□□□□□ -0.3
ITGA4-205ENST00000468948 NR1I2O75469 434 aa13.18□□□□□ -0.3
ITGA4-205ENST00000468948 PCDHB3Q9Y5E6 796 aa13.18□□□□□ -0.3
ITGA4-205ENST00000468948 PATL2C9JE40 543 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms