RNA–Protein interactions for RNA: ENST00000468892.5

ABCF3-207, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 1,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-207ENST00000468892 MYOM1P52179 1685 aa25.48■■□□□ 1.67
ABCF3-207ENST00000468892 ATAD2Q6PL18 1390 aa25.47■■□□□ 1.67
ABCF3-207ENST00000468892 TULP4Q9NRJ4 1543 aa25.47■■□□□ 1.67
ABCF3-207ENST00000468892 KDM4FA0A1W2PPD8 638 aa25.46■■□□□ 1.67
ABCF3-207ENST00000468892 CPS1P31327 1500 aa25.46■■□□□ 1.67
ABCF3-207ENST00000468892 MINK1Q8N4C8 1332 aaPredicted RBP25.46■■□□□ 1.67
ABCF3-207ENST00000468892 SRPK2P78362 688 aaKnown RBP25.45■■□□□ 1.67
ABCF3-207ENST00000468892 PIK3R4Q99570 1358 aa25.44■■□□□ 1.66
ABCF3-207ENST00000468892 NPC1L1Q9UHC9 1359 aa25.44■■□□□ 1.66
ABCF3-207ENST00000468892 MYBBP1AQ9BQG0 1328 aaKnown RBP25.44■■□□□ 1.66
ABCF3-207ENST00000468892 ILDR1Q86SU0 546 aaPredicted RBP25.44■■□□□ 1.66
ABCF3-207ENST00000468892 TMC1Q8TDI8 760 aa25.44■■□□□ 1.66
ABCF3-207ENST00000468892 MRS2Q9HD23 443 aa25.44■■□□□ 1.66
ABCF3-207ENST00000468892 SLC26A8Q96RN1 970 aa25.43■■□□□ 1.66
ABCF3-207ENST00000468892 PARD3Q8TEW0 1356 aa25.42■■□□□ 1.66
ABCF3-207ENST00000468892 WAPLQ7Z5K2 1190 aa25.41■■□□□ 1.66
ABCF3-207ENST00000468892 CNGB1Q14028 1251 aaPredicted RBP25.39■■□□□ 1.65
ABCF3-207ENST00000468892 CDK19Q9BWU1 502 aa25.39■■□□□ 1.65
ABCF3-207ENST00000468892 CABP2Q9NPB3 220 aa25.39■■□□□ 1.65
ABCF3-207ENST00000468892 BRD4O60885 1362 aaPredicted RBP25.37■■□□□ 1.65
ABCF3-207ENST00000468892 CC2D1BQ5T0F9 858 aaKnown RBP25.37■■□□□ 1.65
ABCF3-207ENST00000468892 NLRP13Q86W25 1043 aa25.36■■□□□ 1.65
ABCF3-207ENST00000468892 SLC12A5Q9H2X9 1139 aa25.36■■□□□ 1.65
ABCF3-207ENST00000468892 TERF2IPQ9NYB0 399 aa25.36■■□□□ 1.65
ABCF3-207ENST00000468892 AMOTL2Q9Y2J4 779 aa25.36■■□□□ 1.65
ABCF3-207ENST00000468892 ANKRD36BQ8N2N9 1353 aa25.36■■□□□ 1.65
ABCF3-207ENST00000468892 PLEKHH1Q9ULM0 1364 aa25.36■■□□□ 1.65
ABCF3-207ENST00000468892 PTCH1Q13635 1447 aa25.35■■□□□ 1.65
ABCF3-207ENST00000468892 AMER1Q5JTC6 1135 aaPredicted RBP25.35■■□□□ 1.65
ABCF3-207ENST00000468892 WASLO00401 505 aaPredicted RBP25.34■■□□□ 1.65
ABCF3-207ENST00000468892 ROBO2Q9HCK4 1378 aa25.33■■□□□ 1.65
ABCF3-207ENST00000468892 PTPRUQ92729 1446 aa25.31■■□□□ 1.64
ABCF3-207ENST00000468892 HDGFL2Q7Z4V5 671 aaPredicted RBP25.31■■□□□ 1.64
ABCF3-207ENST00000468892 CARD14Q9BXL6 1004 aa25.31■■□□□ 1.64
ABCF3-207ENST00000468892 CGNL1Q0VF96 1302 aa25.31■■□□□ 1.64
ABCF3-207ENST00000468892 NPHP4O75161 1426 aaPredicted RBP25.3■■□□□ 1.64
ABCF3-207ENST00000468892 NSD3Q9BZ95 1437 aa25.29■■□□□ 1.64
ABCF3-207ENST00000468892 USP32Q8NFA0 1604 aa25.28■■□□□ 1.64
ABCF3-207ENST00000468892 ADGRB2O60241 1585 aa25.28■■□□□ 1.64
ABCF3-207ENST00000468892 NSD2O96028 1365 aa25.28■■□□□ 1.64
ABCF3-207ENST00000468892 XRN1Q8IZH2 1706 aaKnown RBP25.27■■□□□ 1.64
ABCF3-207ENST00000468892 CCDC184Q52MB2 194 aa25.27■■□□□ 1.64
ABCF3-207ENST00000468892 ATP7BP35670 1465 aa25.24■■□□□ 1.63
ABCF3-207ENST00000468892 FAM9BQ8IZU0 186 aa25.24■■□□□ 1.63
ABCF3-207ENST00000468892 CCDC61Q9Y6R9 512 aa25.23■■□□□ 1.63
ABCF3-207ENST00000468892 NUDT16Q96DE0 195 aaKnown RBP25.22■■□□□ 1.63
ABCF3-207ENST00000468892 CABP1Q9NZU7 370 aa25.22■■□□□ 1.63
ABCF3-207ENST00000468892 A0A1W2PP64 1363 aa25.21■■□□□ 1.63
ABCF3-207ENST00000468892 CHD2O14647 1828 aaKnown RBP25.2■■□□□ 1.62
ABCF3-207ENST00000468892 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.19■■□□□ 1.62
ABCF3-207ENST00000468892 KCNA6P17658 529 aa25.19■■□□□ 1.62
ABCF3-207ENST00000468892 PPP2R1AP30153 589 aa25.19■■□□□ 1.62
ABCF3-207ENST00000468892 MORC1Q86VD1 984 aa25.19■■□□□ 1.62
ABCF3-207ENST00000468892 PNISRQ8TF01 805 aaKnown RBP25.19■■□□□ 1.62
ABCF3-207ENST00000468892 NCKAP5LQ9HCH0 1330 aa25.19■■□□□ 1.62
ABCF3-207ENST00000468892 PPIP5K1Q6PFW1 1433 aa25.18■■□□□ 1.62
ABCF3-207ENST00000468892 HNRNPUQ00839 825 aaKnown RBP eCLIP25.17■■□□□ 1.62
ABCF3-207ENST00000468892 ZNF692Q9BU19 519 aaPredicted RBP25.16■■□□□ 1.62
ABCF3-207ENST00000468892 CD163L1Q9NR16 1453 aa25.14■■□□□ 1.62
ABCF3-207ENST00000468892 INSRP06213 1382 aa25.12■■□□□ 1.61
ABCF3-207ENST00000468892 CPSF1Q10570 1443 aaKnown RBP25.11■■□□□ 1.61
ABCF3-207ENST00000468892 CDC42BPGQ6DT37 1551 aa25.11■■□□□ 1.61
ABCF3-207ENST00000468892 EDC4Q6P2E9 1401 aaKnown RBP25.11■■□□□ 1.61
ABCF3-207ENST00000468892 PLEKHG3A1L390 1219 aa25.1■■□□□ 1.61
ABCF3-207ENST00000468892 ANKARQ7Z5J8 1434 aa25.1■■□□□ 1.61
ABCF3-207ENST00000468892 NWD1Q149M9 1564 aa25.08■■□□□ 1.61
ABCF3-207ENST00000468892 PRR36Q9H6K5 1346 aa25.07■■□□□ 1.6
ABCF3-207ENST00000468892 ITSN1Q15811 1721 aa25.07■■□□□ 1.6
ABCF3-207ENST00000468892 WDR43Q15061 677 aaKnown RBP eCLIP25.06■■□□□ 1.6
ABCF3-207ENST00000468892 TOPAZ1Q8N9V7 1692 aa25.06■■□□□ 1.6
ABCF3-207ENST00000468892 NKTRP30414 1462 aaKnown RBP25.05■■□□□ 1.6
ABCF3-207ENST00000468892 FYB1O15117 783 aa25.05■■□□□ 1.6
ABCF3-207ENST00000468892 CFAP53Q96M91 514 aa25.05■■□□□ 1.6
ABCF3-207ENST00000468892 ZBED9Q6R2W3 1325 aa25.04■■□□□ 1.6
ABCF3-207ENST00000468892 ANKRD26Q9UPS8 1709 aa25.04■■□□□ 1.6
ABCF3-207ENST00000468892 ADGRL3Q9HAR2 1447 aa25.03■■□□□ 1.6
ABCF3-207ENST00000468892 KIF20BQ96Q89 1820 aa25.03■■□□□ 1.6
ABCF3-207ENST00000468892 AKAP12Q02952 1782 aa25.02■■□□□ 1.6
ABCF3-207ENST00000468892 LMTK3Q96Q04 1460 aa25.02■■□□□ 1.6
ABCF3-207ENST00000468892 POLR3AO14802 1390 aaPredicted RBP25.02■■□□□ 1.6
ABCF3-207ENST00000468892 C14orf37Q86TY3 774 aa25.02■■□□□ 1.6
ABCF3-207ENST00000468892 MON2Q7Z3U7 1717 aa25.01■■□□□ 1.59
ABCF3-207ENST00000468892 PROSER2Q86WR7 435 aaPredicted RBP25.01■■□□□ 1.59
ABCF3-207ENST00000468892 GGNBP2Q9H3C7 697 aa25.01■■□□□ 1.59
ABCF3-207ENST00000468892 FMN2Q9NZ56 1722 aa25■■□□□ 1.59
ABCF3-207ENST00000468892 ACEP12821 1306 aa25■■□□□ 1.59
ABCF3-207ENST00000468892 HSPA2P54652 639 aa25■■□□□ 1.59
ABCF3-207ENST00000468892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25■■□□□ 1.59
ABCF3-207ENST00000468892 NUTM2FA1L443 756 aa24.98■■□□□ 1.59
ABCF3-207ENST00000468892 TNNT2P45379 298 aaPredicted RBP24.98■■□□□ 1.59
ABCF3-207ENST00000468892 SCAF1Q9H7N4 1312 aaKnown RBP24.98■■□□□ 1.59
ABCF3-207ENST00000468892 NGDNQ8NEJ9 315 aaKnown RBP24.97■■□□□ 1.59
ABCF3-207ENST00000468892 NALCNQ8IZF0 1738 aa24.97■■□□□ 1.59
ABCF3-207ENST00000468892 NCOA3Q9Y6Q9 1424 aa24.96■■□□□ 1.59
ABCF3-207ENST00000468892 COG3Q96JB2 828 aa24.95■■□□□ 1.59
ABCF3-207ENST00000468892 TTC21AQ8NDW8 1320 aa24.95■■□□□ 1.58
ABCF3-207ENST00000468892 USP6P35125 1406 aa24.95■■□□□ 1.58
ABCF3-207ENST00000468892 MTHFSP49914 203 aa24.94■■□□□ 1.58
ABCF3-207ENST00000468892 BLMP54132 1417 aaPredicted RBP24.93■■□□□ 1.58
ABCF3-207ENST00000468892 TTC21BQ7Z4L5 1316 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms