RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 NINLQ9Y2I6 1382 aa20.25■□□□□ 0.83
UBR4-210ENST00000466969 CCDC9Q9Y3X0 531 aaKnown RBP20.25■□□□□ 0.83
UBR4-210ENST00000466969 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
UBR4-210ENST00000466969 SLIT2O94813 1529 aa20.24■□□□□ 0.83
UBR4-210ENST00000466969 ONECUT3O60422 494 aaPredicted RBP20.23■□□□□ 0.83
UBR4-210ENST00000466969 VPS72Q15906 364 aa20.21■□□□□ 0.83
UBR4-210ENST00000466969 EZH2Q15910 746 aaKnown RBP20.21■□□□□ 0.83
UBR4-210ENST00000466969 RGPD1P0DJD0 1748 aa20.21■□□□□ 0.83
UBR4-210ENST00000466969 NALCNQ8IZF0 1738 aa20.2■□□□□ 0.82
UBR4-210ENST00000466969 CEP350Q5VT06 3117 aa20.2■□□□□ 0.82
UBR4-210ENST00000466969 SPON1Q9HCB6 807 aa20.2■□□□□ 0.82
UBR4-210ENST00000466969 MYOM3Q5VTT5 1437 aa20.19■□□□□ 0.82
UBR4-210ENST00000466969 NPHP3Q7Z494 1330 aa20.19■□□□□ 0.82
UBR4-210ENST00000466969 DISP2A7MBM2 1401 aa20.18■□□□□ 0.82
UBR4-210ENST00000466969 UTRNP46939 3433 aa20.17■□□□□ 0.82
UBR4-210ENST00000466969 CAMTA1Q9Y6Y1 1673 aa20.15■□□□□ 0.82
UBR4-210ENST00000466969 KCNQ2O43526 872 aa20.13■□□□□ 0.81
UBR4-210ENST00000466969 METP08581 1390 aa20.12■□□□□ 0.81
UBR4-210ENST00000466969 NBPF8Q3BBV2 869 aa20.12■□□□□ 0.81
UBR4-210ENST00000466969 NBPF14Q5TI25 921 aa20.12■□□□□ 0.81
UBR4-210ENST00000466969 CAMKK2Q96RR4 588 aa20.12■□□□□ 0.81
UBR4-210ENST00000466969 HAP1P54257 671 aaPredicted RBP20.11■□□□□ 0.81
UBR4-210ENST00000466969 XPCQ01831 940 aaPredicted RBP20.11■□□□□ 0.81
UBR4-210ENST00000466969 PTPN23Q9H3S7 1636 aa20.1■□□□□ 0.81
UBR4-210ENST00000466969 GIGYF1O75420 1035 aaPredicted RBP20.1■□□□□ 0.81
UBR4-210ENST00000466969 ESCO1Q5FWF5 840 aa20.1■□□□□ 0.81
UBR4-210ENST00000466969 FAM98CQ17RN3 349 aaKnown RBP20.09■□□□□ 0.81
UBR4-210ENST00000466969 FAM182BQ5T319 152 aa20.09■□□□□ 0.81
UBR4-210ENST00000466969 PXDNQ92626 1479 aa20.09■□□□□ 0.81
UBR4-210ENST00000466969 PARD3Q8TEW0 1356 aa20.08■□□□□ 0.81
UBR4-210ENST00000466969 FOXO3O43524 673 aa20.08■□□□□ 0.81
UBR4-210ENST00000466969 ADGRB2O60241 1585 aa20.08■□□□□ 0.8
UBR4-210ENST00000466969 LRPPRCP42704 1394 aaKnown RBP20.07■□□□□ 0.8
UBR4-210ENST00000466969 ADGRL2O95490 1459 aa20.06■□□□□ 0.8
UBR4-210ENST00000466969 NRXN3Q9Y4C0 1643 aa20.06■□□□□ 0.8
UBR4-210ENST00000466969 ABCC5O15440 1437 aa20.06■□□□□ 0.8
UBR4-210ENST00000466969 TNS1Q9HBL0 1735 aaKnown RBP20.06■□□□□ 0.8
UBR4-210ENST00000466969 USP32Q8NFA0 1604 aa20.05■□□□□ 0.8
UBR4-210ENST00000466969 CROCC2H7BZ55 1655 aa20.05■□□□□ 0.8
UBR4-210ENST00000466969 APBA3O96018 575 aa20.04■□□□□ 0.8
UBR4-210ENST00000466969 ANKRD30AQ9BXX3 1397 aa20.04■□□□□ 0.8
UBR4-210ENST00000466969 CHD4Q14839 1912 aa20.03■□□□□ 0.8
UBR4-210ENST00000466969 NWD2Q9ULI1 1742 aa20.02■□□□□ 0.8
UBR4-210ENST00000466969 TRIM37O94972 964 aa20.02■□□□□ 0.8
UBR4-210ENST00000466969 CHIC2Q9UKJ5 165 aa20■□□□□ 0.79
UBR4-210ENST00000466969 PLCH1Q4KWH8 1693 aa20■□□□□ 0.79
UBR4-210ENST00000466969 SPATA31A3Q5VYP0 1347 aa19.99■□□□□ 0.79
UBR4-210ENST00000466969 DAPK1P53355 1430 aa19.97■□□□□ 0.79
UBR4-210ENST00000466969 ZNF326Q5BKZ1 582 aaKnown RBP19.96■□□□□ 0.79
UBR4-210ENST00000466969 FAM196AQ6ZSG2 479 aa19.96■□□□□ 0.79
UBR4-210ENST00000466969 PLEKHG5O94827 1062 aa19.95■□□□□ 0.78
UBR4-210ENST00000466969 RREB1Q92766 1687 aa19.94■□□□□ 0.78
UBR4-210ENST00000466969 NUP188Q5SRE5 1749 aa19.94■□□□□ 0.78
UBR4-210ENST00000466969 ROBO2Q9HCK4 1378 aa19.94■□□□□ 0.78
UBR4-210ENST00000466969 CABLES1Q8TDN4 633 aa19.93■□□□□ 0.78
UBR4-210ENST00000466969 IQGAP3Q86VI3 1631 aa19.92■□□□□ 0.78
UBR4-210ENST00000466969 NRKQ7Z2Y5 1582 aa19.91■□□□□ 0.78
UBR4-210ENST00000466969 FAM83GA6ND36 823 aa19.9■□□□□ 0.78
UBR4-210ENST00000466969 HFM1A2PYH4 1435 aa19.89■□□□□ 0.77
UBR4-210ENST00000466969 CCDC144AA2RUR9 1427 aa19.89■□□□□ 0.77
UBR4-210ENST00000466969 KRT28Q7Z3Y7 464 aa19.89■□□□□ 0.77
UBR4-210ENST00000466969 BTG4Q9NY30 223 aa19.89■□□□□ 0.77
UBR4-210ENST00000466969 NUTM2FA1L443 756 aa19.87■□□□□ 0.77
UBR4-210ENST00000466969 SYT17Q9BSW7 474 aa19.87■□□□□ 0.77
UBR4-210ENST00000466969 CDC42BPGQ6DT37 1551 aa19.86■□□□□ 0.77
UBR4-210ENST00000466969 E9PCH4 1651 aa19.85■□□□□ 0.77
UBR4-210ENST00000466969 SPATA31A5Q5VU36 1347 aa19.85■□□□□ 0.77
UBR4-210ENST00000466969 SPATA31A7Q8IWB4 1347 aa19.85■□□□□ 0.77
UBR4-210ENST00000466969 LMOD2Q6P5Q4 547 aa19.85■□□□□ 0.77
UBR4-210ENST00000466969 FHDC1Q9C0D6 1143 aaPredicted RBP19.85■□□□□ 0.77
UBR4-210ENST00000466969 ANKRD50Q9ULJ7 1429 aa19.85■□□□□ 0.77
UBR4-210ENST00000466969 NRAPQ86VF7 1730 aa19.84■□□□□ 0.77
UBR4-210ENST00000466969 TNS3Q68CZ2 1445 aa19.84■□□□□ 0.77
UBR4-210ENST00000466969 PSME1Q06323 249 aa19.83■□□□□ 0.77
UBR4-210ENST00000466969 THSD7AQ9UPZ6 1657 aa19.83■□□□□ 0.76
UBR4-210ENST00000466969 MYOM1P52179 1685 aa19.82■□□□□ 0.76
UBR4-210ENST00000466969 ZBTB7AO95365 584 aa19.82■□□□□ 0.76
UBR4-210ENST00000466969 PTGER2P43116 358 aa19.8■□□□□ 0.76
UBR4-210ENST00000466969 KANK4Q5T7N3 995 aaPredicted RBP19.8■□□□□ 0.76
UBR4-210ENST00000466969 PRAG1Q86YV5 1406 aa19.79■□□□□ 0.76
UBR4-210ENST00000466969 NEXMIFQ5QGS0 1516 aa19.78■□□□□ 0.76
UBR4-210ENST00000466969 CAPN15O75808 1086 aa19.78■□□□□ 0.76
UBR4-210ENST00000466969 HSPA6P17066 643 aa19.78■□□□□ 0.76
UBR4-210ENST00000466969 ATF5Q9Y2D1 282 aaPredicted RBP19.78■□□□□ 0.76
UBR4-210ENST00000466969 ARHGEF10O15013 1369 aa19.78■□□□□ 0.76
UBR4-210ENST00000466969 KIF1AQ12756 1690 aa19.78■□□□□ 0.76
UBR4-210ENST00000466969 PDE3BQ13370 1112 aa19.77■□□□□ 0.76
UBR4-210ENST00000466969 GPR162Q16538 588 aa19.77■□□□□ 0.76
UBR4-210ENST00000466969 DLC1Q96QB1 1528 aa19.76■□□□□ 0.75
UBR4-210ENST00000466969 ABCA3Q99758 1704 aa19.76■□□□□ 0.75
UBR4-210ENST00000466969 NAIPQ13075 1403 aa19.76■□□□□ 0.75
UBR4-210ENST00000466969 CASZ1Q86V15 1759 aa19.75■□□□□ 0.75
UBR4-210ENST00000466969 COL14A1Q05707 1796 aaKnown RBP19.73■□□□□ 0.75
UBR4-210ENST00000466969 PDGFDQ9GZP0 370 aaPredicted RBP19.73■□□□□ 0.75
UBR4-210ENST00000466969 RRBP1Q9P2E9 1410 aaKnown RBP19.73■□□□□ 0.75
UBR4-210ENST00000466969 SBNO1A3KN83 1393 aa19.72■□□□□ 0.75
UBR4-210ENST00000466969 SLC34A2O95436 690 aa19.71■□□□□ 0.75
UBR4-210ENST00000466969 ANO8Q9HCE9 1232 aaPredicted RBP19.71■□□□□ 0.75
UBR4-210ENST00000466969 SPATA31A1Q5TZJ5 1347 aa19.71■□□□□ 0.75
UBR4-210ENST00000466969 VGFO15240 615 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms