RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 SLIT1O75093 1534 aa16.49■□□□□ 0.23
LAMP3-202ENST00000466939 METP08581 1390 aa16.49■□□□□ 0.23
LAMP3-202ENST00000466939 ABCC11Q96J66 1382 aa16.49■□□□□ 0.23
LAMP3-202ENST00000466939 THEMISQ8N1K5 641 aaPredicted RBP16.48■□□□□ 0.23
LAMP3-202ENST00000466939 ARHGAP23Q9P227 1491 aa16.48■□□□□ 0.23
LAMP3-202ENST00000466939 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
LAMP3-202ENST00000466939 LTKP29376 864 aa16.48■□□□□ 0.23
LAMP3-202ENST00000466939 SRPK2P78362 688 aaKnown RBP16.48■□□□□ 0.23
LAMP3-202ENST00000466939 CEP170BQ9Y4F5 1589 aaPredicted RBP16.47■□□□□ 0.23
LAMP3-202ENST00000466939 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
LAMP3-202ENST00000466939 CABP2Q9NPB3 220 aa16.47■□□□□ 0.23
LAMP3-202ENST00000466939 KNDC1Q76NI1 1749 aa16.46■□□□□ 0.23
LAMP3-202ENST00000466939 NPC1L1Q9UHC9 1359 aa16.46■□□□□ 0.23
LAMP3-202ENST00000466939 ADAMTS13Q76LX8 1427 aa16.46■□□□□ 0.23
LAMP3-202ENST00000466939 NSD3Q9BZ95 1437 aa16.45■□□□□ 0.22
LAMP3-202ENST00000466939 SLC12A5Q9H2X9 1139 aa16.45■□□□□ 0.22
LAMP3-202ENST00000466939 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
LAMP3-202ENST00000466939 ATAD2Q6PL18 1390 aa16.45■□□□□ 0.22
LAMP3-202ENST00000466939 PLEKHH1Q9ULM0 1364 aa16.44■□□□□ 0.22
LAMP3-202ENST00000466939 NINLQ9Y2I6 1382 aa16.44■□□□□ 0.22
LAMP3-202ENST00000466939 TECPR2O15040 1411 aa16.44■□□□□ 0.22
LAMP3-202ENST00000466939 CPS1P31327 1500 aa16.43■□□□□ 0.22
LAMP3-202ENST00000466939 WAPLQ7Z5K2 1190 aa16.43■□□□□ 0.22
LAMP3-202ENST00000466939 CARD14Q9BXL6 1004 aa16.43■□□□□ 0.22
LAMP3-202ENST00000466939 PNISRQ8TF01 805 aaKnown RBP16.42■□□□□ 0.22
LAMP3-202ENST00000466939 FAM135BQ49AJ0 1406 aa16.42■□□□□ 0.22
LAMP3-202ENST00000466939 ANKRD36BQ8N2N9 1353 aa16.42■□□□□ 0.22
LAMP3-202ENST00000466939 CDK19Q9BWU1 502 aa16.42■□□□□ 0.22
LAMP3-202ENST00000466939 ZNF142P52746 1687 aaPredicted RBP16.41■□□□□ 0.22
LAMP3-202ENST00000466939 SIRT1Q96EB6 747 aa16.41■□□□□ 0.22
LAMP3-202ENST00000466939 DIP2AQ14689 1571 aa16.4■□□□□ 0.22
LAMP3-202ENST00000466939 PPP2R1AP30153 589 aa16.4■□□□□ 0.22
LAMP3-202ENST00000466939 SLC26A8Q96RN1 970 aa16.4■□□□□ 0.22
LAMP3-202ENST00000466939 MED14O60244 1454 aa16.39■□□□□ 0.21
LAMP3-202ENST00000466939 USP32Q8NFA0 1604 aa16.39■□□□□ 0.21
LAMP3-202ENST00000466939 TBX22Q9Y458 520 aa16.37■□□□□ 0.21
LAMP3-202ENST00000466939 CGNL1Q0VF96 1302 aa16.37■□□□□ 0.21
LAMP3-202ENST00000466939 ZBED9Q6R2W3 1325 aa16.37■□□□□ 0.21
LAMP3-202ENST00000466939 ROBO2Q9HCK4 1378 aa16.37■□□□□ 0.21
LAMP3-202ENST00000466939 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
LAMP3-202ENST00000466939 HDGFL2Q7Z4V5 671 aaPredicted RBP16.35■□□□□ 0.21
LAMP3-202ENST00000466939 MORC1Q86VD1 984 aa16.35■□□□□ 0.21
LAMP3-202ENST00000466939 A0A1W2PP64 1363 aa16.35■□□□□ 0.21
LAMP3-202ENST00000466939 WASLO00401 505 aaPredicted RBP16.35■□□□□ 0.21
LAMP3-202ENST00000466939 PTPRUQ92729 1446 aa16.34■□□□□ 0.21
LAMP3-202ENST00000466939 ANKLE2Q86XL3 938 aa16.34■□□□□ 0.21
LAMP3-202ENST00000466939 NSD2O96028 1365 aa16.34■□□□□ 0.21
LAMP3-202ENST00000466939 CABP1Q9NZU7 370 aa16.32■□□□□ 0.2
LAMP3-202ENST00000466939 AMOTL2Q9Y2J4 779 aa16.32■□□□□ 0.2
LAMP3-202ENST00000466939 ADGRB2O60241 1585 aa16.31■□□□□ 0.2
LAMP3-202ENST00000466939 ATP7BP35670 1465 aa16.31■□□□□ 0.2
LAMP3-202ENST00000466939 PTCH1Q13635 1447 aa16.31■□□□□ 0.2
LAMP3-202ENST00000466939 WDR43Q15061 677 aaKnown RBP eCLIP16.31■□□□□ 0.2
LAMP3-202ENST00000466939 CD163L1Q9NR16 1453 aa16.31■□□□□ 0.2
LAMP3-202ENST00000466939 SETD1BQ9UPS6 1966 aaKnown RBP16.3■□□□□ 0.2
LAMP3-202ENST00000466939 PPIP5K1Q6PFW1 1433 aa16.3■□□□□ 0.2
LAMP3-202ENST00000466939 INSRP06213 1382 aa16.3■□□□□ 0.2
LAMP3-202ENST00000466939 PIK3R4Q99570 1358 aa16.29■□□□□ 0.2
LAMP3-202ENST00000466939 XRN1Q8IZH2 1706 aaKnown RBP16.29■□□□□ 0.2
LAMP3-202ENST00000466939 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.29■□□□□ 0.2
LAMP3-202ENST00000466939 NUDT16Q96DE0 195 aaKnown RBP16.29■□□□□ 0.2
LAMP3-202ENST00000466939 BLMP54132 1417 aaPredicted RBP16.28■□□□□ 0.2
LAMP3-202ENST00000466939 TNNT2P45379 298 aaPredicted RBP16.28■□□□□ 0.2
LAMP3-202ENST00000466939 SENP3-EIF4A1A0A087X0R7 540 aa16.26■□□□□ 0.19
LAMP3-202ENST00000466939 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
LAMP3-202ENST00000466939 NPHP4O75161 1426 aaPredicted RBP16.25■□□□□ 0.19
LAMP3-202ENST00000466939 KIF20BQ96Q89 1820 aa16.24■□□□□ 0.19
LAMP3-202ENST00000466939 GGNBP2Q9H3C7 697 aa16.24■□□□□ 0.19
LAMP3-202ENST00000466939 CCDC61Q9Y6R9 512 aa16.24■□□□□ 0.19
LAMP3-202ENST00000466939 ANKRD26Q9UPS8 1709 aa16.24■□□□□ 0.19
LAMP3-202ENST00000466939 POLR3AO14802 1390 aaPredicted RBP16.24■□□□□ 0.19
LAMP3-202ENST00000466939 KCNA6P17658 529 aa16.23■□□□□ 0.19
LAMP3-202ENST00000466939 CFAP53Q96M91 514 aa16.23■□□□□ 0.19
LAMP3-202ENST00000466939 PRR36Q9H6K5 1346 aa16.23■□□□□ 0.19
LAMP3-202ENST00000466939 NEFLP07196 543 aa16.22■□□□□ 0.19
LAMP3-202ENST00000466939 ADAMTS8Q9UP79 889 aa16.22■□□□□ 0.19
LAMP3-202ENST00000466939 ITSN1Q15811 1721 aa16.22■□□□□ 0.19
LAMP3-202ENST00000466939 CPSF1Q10570 1443 aaKnown RBP16.22■□□□□ 0.19
LAMP3-202ENST00000466939 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
LAMP3-202ENST00000466939 FYB1O15117 783 aa16.22■□□□□ 0.19
LAMP3-202ENST00000466939 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.22■□□□□ 0.19
LAMP3-202ENST00000466939 TOPAZ1Q8N9V7 1692 aa16.21■□□□□ 0.19
LAMP3-202ENST00000466939 NCKAP5LQ9HCH0 1330 aa16.21■□□□□ 0.19
LAMP3-202ENST00000466939 SMG6Q86US8 1419 aaKnown RBP16.2■□□□□ 0.18
LAMP3-202ENST00000466939 NUTM2FA1L443 756 aa16.2■□□□□ 0.18
LAMP3-202ENST00000466939 MON2Q7Z3U7 1717 aa16.2■□□□□ 0.18
LAMP3-202ENST00000466939 AKAP12Q02952 1782 aa16.19■□□□□ 0.18
LAMP3-202ENST00000466939 MTHFSP49914 203 aa16.19■□□□□ 0.18
LAMP3-202ENST00000466939 SALL2Q9Y467 1007 aaPredicted RBP16.19■□□□□ 0.18
LAMP3-202ENST00000466939 CHD2O14647 1828 aaKnown RBP16.18■□□□□ 0.18
LAMP3-202ENST00000466939 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
LAMP3-202ENST00000466939 NUDCQ9Y266 331 aa16.17■□□□□ 0.18
LAMP3-202ENST00000466939 NKTRP30414 1462 aaKnown RBP16.16■□□□□ 0.18
LAMP3-202ENST00000466939 SHPRHQ149N8 1683 aa16.16■□□□□ 0.18
LAMP3-202ENST00000466939 PLEKHG3A1L390 1219 aa16.16■□□□□ 0.18
LAMP3-202ENST00000466939 SUPT16HQ9Y5B9 1047 aaKnown RBP16.16■□□□□ 0.18
LAMP3-202ENST00000466939 ANKARQ7Z5J8 1434 aa16.15■□□□□ 0.18
LAMP3-202ENST00000466939 PDE3BQ13370 1112 aa16.15■□□□□ 0.18
LAMP3-202ENST00000466939 FKBP8Q14318 412 aa16.15■□□□□ 0.18
LAMP3-202ENST00000466939 NME9Q86XW9 330 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms