RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 DMRT2Q9Y5R5 561 aa24.5■■□□□ 1.51
LETM1-202ENST00000466175 TXNDC2Q86VQ3 553 aa24.49■■□□□ 1.51
LETM1-202ENST00000466175 SLIT1O75093 1534 aa24.48■■□□□ 1.51
LETM1-202ENST00000466175 TRAK1Q9UPV9 953 aa24.48■■□□□ 1.51
LETM1-202ENST00000466175 ARHGAP23Q9P227 1491 aa24.48■■□□□ 1.51
LETM1-202ENST00000466175 ARHGEF28Q8N1W1 1705 aaKnown RBP24.47■■□□□ 1.51
LETM1-202ENST00000466175 PPP2R1AP30153 589 aa24.47■■□□□ 1.51
LETM1-202ENST00000466175 NUTM2DQ5VT03 806 aaPredicted RBP24.46■■□□□ 1.51
LETM1-202ENST00000466175 EID1Q9Y6B2 187 aa24.45■■□□□ 1.5
LETM1-202ENST00000466175 NPHP4O75161 1426 aaPredicted RBP24.44■■□□□ 1.5
LETM1-202ENST00000466175 RNF123Q5XPI4 1314 aa24.43■■□□□ 1.5
LETM1-202ENST00000466175 PPP4R2Q9NY27 417 aa24.43■■□□□ 1.5
LETM1-202ENST00000466175 TMEM132EQ6IEE7 984 aa24.42■■□□□ 1.5
LETM1-202ENST00000466175 RIMS2Q9UQ26 1411 aa24.42■■□□□ 1.5
LETM1-202ENST00000466175 EVC2Q86UK5 1308 aa24.41■■□□□ 1.5
LETM1-202ENST00000466175 USP32Q8NFA0 1604 aa24.4■■□□□ 1.5
LETM1-202ENST00000466175 MED14O60244 1454 aa24.4■■□□□ 1.5
LETM1-202ENST00000466175 WDR43Q15061 677 aaKnown RBP eCLIP24.37■■□□□ 1.49
LETM1-202ENST00000466175 NINLQ9Y2I6 1382 aa24.37■■□□□ 1.49
LETM1-202ENST00000466175 ZNF335Q9H4Z2 1342 aaPredicted RBP24.36■■□□□ 1.49
LETM1-202ENST00000466175 CARD14Q9BXL6 1004 aa24.35■■□□□ 1.49
LETM1-202ENST00000466175 IRX6P78412 446 aaPredicted RBP24.34■■□□□ 1.49
LETM1-202ENST00000466175 TULP4Q9NRJ4 1543 aa24.33■■□□□ 1.49
LETM1-202ENST00000466175 ALKQ9UM73 1620 aa24.32■■□□□ 1.48
LETM1-202ENST00000466175 SLC26A8Q96RN1 970 aa24.32■■□□□ 1.48
LETM1-202ENST00000466175 HDGFP51858 240 aaKnown RBP24.32■■□□□ 1.48
LETM1-202ENST00000466175 YTHDC2Q9H6S0 1430 aaKnown RBP24.31■■□□□ 1.48
LETM1-202ENST00000466175 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.31■■□□□ 1.48
LETM1-202ENST00000466175 ADAMTS8Q9UP79 889 aa24.31■■□□□ 1.48
LETM1-202ENST00000466175 NSD3Q9BZ95 1437 aa24.3■■□□□ 1.48
LETM1-202ENST00000466175 TSHZ2Q9NRE2 1034 aa24.3■■□□□ 1.48
LETM1-202ENST00000466175 NSD2O96028 1365 aa24.29■■□□□ 1.48
LETM1-202ENST00000466175 ANKRD36BQ8N2N9 1353 aa24.29■■□□□ 1.48
LETM1-202ENST00000466175 PLEKHG1Q9ULL1 1385 aa24.28■■□□□ 1.48
LETM1-202ENST00000466175 NGEFQ8N5V2 710 aa24.28■■□□□ 1.48
LETM1-202ENST00000466175 DLC1Q96QB1 1528 aa24.27■■□□□ 1.48
LETM1-202ENST00000466175 POLR3AO14802 1390 aaPredicted RBP24.27■■□□□ 1.48
LETM1-202ENST00000466175 CGNL1Q0VF96 1302 aa24.27■■□□□ 1.48
LETM1-202ENST00000466175 LTBP4Q8N2S1 1624 aa24.26■■□□□ 1.47
LETM1-202ENST00000466175 SLC12A5Q9H2X9 1139 aa24.26■■□□□ 1.47
LETM1-202ENST00000466175 ATAD2Q6PL18 1390 aa24.26■■□□□ 1.47
LETM1-202ENST00000466175 STRCP1A6NGW2 1772 aa24.24■■□□□ 1.47
LETM1-202ENST00000466175 MORC1Q86VD1 984 aa24.23■■□□□ 1.47
LETM1-202ENST00000466175 RCAN3Q9UKA8 241 aa24.23■■□□□ 1.47
LETM1-202ENST00000466175 POGKQ9P215 609 aa24.21■■□□□ 1.47
LETM1-202ENST00000466175 ADAMTS13Q76LX8 1427 aa24.21■■□□□ 1.47
LETM1-202ENST00000466175 CERKQ8TCT0 537 aa24.21■■□□□ 1.47
LETM1-202ENST00000466175 STK26Q9P289 416 aa24.21■■□□□ 1.47
LETM1-202ENST00000466175 SETD1AO15047 1707 aaKnown RBP24.2■■□□□ 1.46
LETM1-202ENST00000466175 NRXN3Q9Y4C0 1643 aa24.2■■□□□ 1.46
LETM1-202ENST00000466175 SALL2Q9Y467 1007 aaPredicted RBP24.19■■□□□ 1.46
LETM1-202ENST00000466175 PRAM1Q96QH2 718 aa24.18■■□□□ 1.46
LETM1-202ENST00000466175 SENP3-EIF4A1A0A087X0R7 540 aa24.17■■□□□ 1.46
LETM1-202ENST00000466175 RRP1P56182 461 aaKnown RBP24.17■■□□□ 1.46
LETM1-202ENST00000466175 CABP2Q9NPB3 220 aa24.17■■□□□ 1.46
LETM1-202ENST00000466175 ABCC11Q96J66 1382 aa24.16■■□□□ 1.46
LETM1-202ENST00000466175 SRPK2P78362 688 aaKnown RBP24.16■■□□□ 1.46
LETM1-202ENST00000466175 TERF2IPQ9NYB0 399 aa24.16■■□□□ 1.46
LETM1-202ENST00000466175 ZNF521Q96K83 1311 aa24.15■■□□□ 1.46
LETM1-202ENST00000466175 TBX22Q9Y458 520 aa24.15■■□□□ 1.46
LETM1-202ENST00000466175 CDCA7LQ96GN5 454 aa24.13■■□□□ 1.45
LETM1-202ENST00000466175 CFAP53Q96M91 514 aa24.13■■□□□ 1.45
LETM1-202ENST00000466175 CPS1P31327 1500 aa24.12■■□□□ 1.45
LETM1-202ENST00000466175 GOLGA2Q08379 1002 aa24.12■■□□□ 1.45
LETM1-202ENST00000466175 SAFB2Q14151 953 aaKnown RBP eCLIP24.12■■□□□ 1.45
LETM1-202ENST00000466175 CHD2O14647 1828 aaKnown RBP24.12■■□□□ 1.45
LETM1-202ENST00000466175 DIP2AQ14689 1571 aa24.12■■□□□ 1.45
LETM1-202ENST00000466175 KCNA6P17658 529 aa24.11■■□□□ 1.45
LETM1-202ENST00000466175 SIRT1Q96EB6 747 aa24.11■■□□□ 1.45
LETM1-202ENST00000466175 RBM33Q96EV2 1170 aaKnown RBP24.11■■□□□ 1.45
LETM1-202ENST00000466175 PLEKHH1Q9ULM0 1364 aa24.11■■□□□ 1.45
LETM1-202ENST00000466175 KNDC1Q76NI1 1749 aa24.11■■□□□ 1.45
LETM1-202ENST00000466175 MINK1Q8N4C8 1332 aaPredicted RBP24.11■■□□□ 1.45
LETM1-202ENST00000466175 SHPRHQ149N8 1683 aa24.1■■□□□ 1.45
LETM1-202ENST00000466175 A0A1W2PP64 1363 aa24.1■■□□□ 1.45
LETM1-202ENST00000466175 METP08581 1390 aa24.1■■□□□ 1.45
LETM1-202ENST00000466175 ANKRD26Q9UPS8 1709 aa24.1■■□□□ 1.45
LETM1-202ENST00000466175 B4GALNT3Q6L9W6 998 aa24.09■■□□□ 1.45
LETM1-202ENST00000466175 HDGFL2Q7Z4V5 671 aaPredicted RBP24.08■■□□□ 1.45
LETM1-202ENST00000466175 LRRC7Q96NW7 1537 aa24.07■■□□□ 1.44
LETM1-202ENST00000466175 PTPRUQ92729 1446 aa24.07■■□□□ 1.44
LETM1-202ENST00000466175 CDK19Q9BWU1 502 aa24.07■■□□□ 1.44
LETM1-202ENST00000466175 NWD1Q149M9 1564 aa24.07■■□□□ 1.44
LETM1-202ENST00000466175 FAM135BQ49AJ0 1406 aa24.07■■□□□ 1.44
LETM1-202ENST00000466175 NCBP3Q53F19 620 aaKnown RBP24.06■■□□□ 1.44
LETM1-202ENST00000466175 CCDC136Q96JN2 1154 aa24.06■■□□□ 1.44
LETM1-202ENST00000466175 TECPR2O15040 1411 aa24.06■■□□□ 1.44
LETM1-202ENST00000466175 PROSER2Q86WR7 435 aaPredicted RBP24.05■■□□□ 1.44
LETM1-202ENST00000466175 XIRP1Q702N8 1843 aaKnown RBP24.05■■□□□ 1.44
LETM1-202ENST00000466175 ATP7BP35670 1465 aa24.04■■□□□ 1.44
LETM1-202ENST00000466175 CD163L1Q9NR16 1453 aa24.04■■□□□ 1.44
LETM1-202ENST00000466175 APAF1O14727 1248 aa24.04■■□□□ 1.44
LETM1-202ENST00000466175 SLFN5Q08AF3 891 aa24.04■■□□□ 1.44
LETM1-202ENST00000466175 DUSP27Q5VZP5 1158 aa24.04■■□□□ 1.44
LETM1-202ENST00000466175 AMOTL2Q9Y2J4 779 aa24.04■■□□□ 1.44
LETM1-202ENST00000466175 MTHFSP49914 203 aa24.03■■□□□ 1.44
LETM1-202ENST00000466175 TRMT2AQ8IZ69 625 aaKnown RBP24.03■■□□□ 1.44
LETM1-202ENST00000466175 CCDC146Q8IYE0 955 aa24.02■■□□□ 1.44
LETM1-202ENST00000466175 PIK3R4Q99570 1358 aa24.02■■□□□ 1.44
LETM1-202ENST00000466175 RUNDC1Q96C34 613 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms