RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 NEO1Q92859 1461 aa11.86□□□□□ -0.51
CDHR3-203ENST00000466045 CCDC144AA2RUR9 1427 aa11.85□□□□□ -0.51
CDHR3-203ENST00000466045 CCDC66A2RUB6 948 aa11.85□□□□□ -0.51
CDHR3-203ENST00000466045 CEP120Q8N960 986 aa11.85□□□□□ -0.51
CDHR3-203ENST00000466045 GZF1Q9H116 711 aaPredicted RBP11.85□□□□□ -0.51
CDHR3-203ENST00000466045 EFCC1Q9HA90 598 aa11.85□□□□□ -0.51
CDHR3-203ENST00000466045 CDC42BPAQ5VT25 1732 aa11.85□□□□□ -0.51
CDHR3-203ENST00000466045 NLRP1Q9C000 1473 aa11.85□□□□□ -0.51
CDHR3-203ENST00000466045 HSPA5P11021 654 aaKnown RBP11.85□□□□□ -0.51
CDHR3-203ENST00000466045 MCCP23508 829 aa11.85□□□□□ -0.51
CDHR3-203ENST00000466045 KCNJ4P48050 445 aa11.85□□□□□ -0.51
CDHR3-203ENST00000466045 MAPK8IP2Q13387 824 aaPredicted RBP11.85□□□□□ -0.51
CDHR3-203ENST00000466045 CENPQQ7L2Z9 268 aaPredicted RBP11.85□□□□□ -0.51
CDHR3-203ENST00000466045 TICAM2Q86XR7 235 aa11.85□□□□□ -0.51
CDHR3-203ENST00000466045 L3MBTL2Q969R5 705 aa11.85□□□□□ -0.51
CDHR3-203ENST00000466045 ZNF777Q9ULD5 760 aaPredicted RBP11.85□□□□□ -0.51
CDHR3-203ENST00000466045 GABPB1Q06547 395 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-203ENST00000466045 NGEFQ8N5V2 710 aa11.84□□□□□ -0.51
CDHR3-203ENST00000466045 MYRIPQ8NFW9 859 aa11.84□□□□□ -0.51
CDHR3-203ENST00000466045 CARD10Q9BWT7 1032 aa11.84□□□□□ -0.51
CDHR3-203ENST00000466045 RCAN3Q9UKA8 241 aa11.84□□□□□ -0.51
CDHR3-203ENST00000466045 ARHGAP5Q13017 1502 aa11.84□□□□□ -0.51
CDHR3-203ENST00000466045 PZPP20742 1482 aa11.84□□□□□ -0.51
CDHR3-203ENST00000466045 ATP2B3Q16720 1220 aa11.84□□□□□ -0.51
CDHR3-203ENST00000466045 COL17A1Q9UMD9 1497 aaPredicted RBP11.83□□□□□ -0.52
CDHR3-203ENST00000466045 IBTKQ9P2D0 1353 aaPredicted RBP11.83□□□□□ -0.52
CDHR3-203ENST00000466045 ARAP3Q8WWN8 1544 aa11.83□□□□□ -0.52
CDHR3-203ENST00000466045 RAPGEF3O95398 923 aa11.83□□□□□ -0.52
CDHR3-203ENST00000466045 CC2D1BQ5T0F9 858 aaKnown RBP11.83□□□□□ -0.52
CDHR3-203ENST00000466045 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
CDHR3-203ENST00000466045 TIGD1Q96MW7 591 aa11.83□□□□□ -0.52
CDHR3-203ENST00000466045 SLKQ9H2G2 1235 aaPredicted RBP11.83□□□□□ -0.52
CDHR3-203ENST00000466045 GAS2L3Q86XJ1 694 aa11.82□□□□□ -0.52
CDHR3-203ENST00000466045 CERS3Q8IU89 383 aa11.82□□□□□ -0.52
CDHR3-203ENST00000466045 CCDC7Q96M83 1385 aa11.82□□□□□ -0.52
CDHR3-203ENST00000466045 SLC4A1APQ9BWU0 796 aaKnown RBP11.82□□□□□ -0.52
CDHR3-203ENST00000466045 KIF3AQ9Y496 699 aa11.82□□□□□ -0.52
CDHR3-203ENST00000466045 SHANK2Q9UPX8 1470 aa11.81□□□□□ -0.52
CDHR3-203ENST00000466045 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.81□□□□□ -0.52
CDHR3-203ENST00000466045 MYO5CQ9NQX4 1742 aa11.81□□□□□ -0.52
CDHR3-203ENST00000466045 ANKRD30AQ9BXX3 1397 aa11.81□□□□□ -0.52
CDHR3-203ENST00000466045 ADGRL1O94910 1474 aa11.81□□□□□ -0.52
CDHR3-203ENST00000466045 RBM25P49756 843 aaKnown RBP11.81□□□□□ -0.52
CDHR3-203ENST00000466045 PRIMPOLQ96LW4 560 aa11.81□□□□□ -0.52
CDHR3-203ENST00000466045 CAPN2P17655 700 aa11.8□□□□□ -0.52
CDHR3-203ENST00000466045 PDLIM2Q96JY6 352 aa11.79□□□□□ -0.52
CDHR3-203ENST00000466045 FEZ1Q99689 392 aa11.79□□□□□ -0.52
CDHR3-203ENST00000466045 CHMP5Q9NZZ3 219 aa11.79□□□□□ -0.52
CDHR3-203ENST00000466045 ZKSCAN5Q9Y2L8 839 aa11.79□□□□□ -0.52
CDHR3-203ENST00000466045 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
CDHR3-203ENST00000466045 PDE3BQ13370 1112 aa11.79□□□□□ -0.52
CDHR3-203ENST00000466045 AEBP1Q8IUX7 1158 aa11.79□□□□□ -0.52
CDHR3-203ENST00000466045 LRPPRCP42704 1394 aaKnown RBP11.79□□□□□ -0.52
CDHR3-203ENST00000466045 KIAA1107Q9UPP5 1409 aa11.79□□□□□ -0.52
CDHR3-203ENST00000466045 PREX2Q70Z35 1606 aa11.79□□□□□ -0.52
CDHR3-203ENST00000466045 PATL2C9JE40 543 aaKnown RBP11.78□□□□□ -0.52
CDHR3-203ENST00000466045 SKOR2Q2VWA4 1001 aaPredicted RBP11.78□□□□□ -0.52
CDHR3-203ENST00000466045 ZNF771Q7L3S4 317 aaPredicted RBP11.78□□□□□ -0.52
CDHR3-203ENST00000466045 SKAP1Q86WV1 359 aa11.78□□□□□ -0.52
CDHR3-203ENST00000466045 SPATA31E1Q6ZUB1 1445 aa11.78□□□□□ -0.52
CDHR3-203ENST00000466045 HSP90AB1P08238 724 aaKnown RBP11.78□□□□□ -0.52
CDHR3-203ENST00000466045 NASPP49321 788 aaPredicted RBP11.78□□□□□ -0.52
CDHR3-203ENST00000466045 HMGN5P82970 282 aaKnown RBP11.78□□□□□ -0.52
CDHR3-203ENST00000466045 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.78□□□□□ -0.52
CDHR3-203ENST00000466045 MBD5Q9P267 1494 aa11.78□□□□□ -0.52
CDHR3-203ENST00000466045 CFAP65Q6ZU64 1925 aaKnown RBP11.78□□□□□ -0.52
CDHR3-203ENST00000466045 HNRNPMP52272 730 aaKnown RBP eCLIP11.77□□□□□ -0.52
CDHR3-203ENST00000466045 XPCQ01831 940 aaPredicted RBP11.77□□□□□ -0.52
CDHR3-203ENST00000466045 ARHGEF5Q12774 1597 aa11.77□□□□□ -0.52
CDHR3-203ENST00000466045 NBPF8Q3BBV2 869 aa11.77□□□□□ -0.52
CDHR3-203ENST00000466045 EGFL6Q8IUX8 553 aa11.77□□□□□ -0.52
CDHR3-203ENST00000466045 AFAP1Q8N556 730 aa11.77□□□□□ -0.52
CDHR3-203ENST00000466045 CDC42BPBQ9Y5S2 1711 aa11.77□□□□□ -0.52
CDHR3-203ENST00000466045 KDM5DQ9BY66 1539 aa11.77□□□□□ -0.53
CDHR3-203ENST00000466045 TRIM6-TRIM34B2RNG4 842 aa11.77□□□□□ -0.53
CDHR3-203ENST00000466045 TMED8Q6PL24 325 aaPredicted RBP11.77□□□□□ -0.53
CDHR3-203ENST00000466045 TRIM34Q9BYJ4 488 aa11.77□□□□□ -0.53
CDHR3-203ENST00000466045 CALCOCO1Q9P1Z2 691 aa11.77□□□□□ -0.53
CDHR3-203ENST00000466045 ANKRD50Q9ULJ7 1429 aa11.76□□□□□ -0.53
CDHR3-203ENST00000466045 NBPF20Q3BBV1 942 aa11.76□□□□□ -0.53
CDHR3-203ENST00000466045 PANK3Q9H999 370 aa11.76□□□□□ -0.53
CDHR3-203ENST00000466045 CCDC9Q9Y3X0 531 aaKnown RBP11.75□□□□□ -0.53
CDHR3-203ENST00000466045 PLEKHH2Q8IVE3 1493 aa11.75□□□□□ -0.53
CDHR3-203ENST00000466045 C9orf84Q5VXU9 1444 aa11.75□□□□□ -0.53
CDHR3-203ENST00000466045 ROCK2O75116 1388 aaKnown RBP11.75□□□□□ -0.53
CDHR3-203ENST00000466045 TBC1D2Q9BYX2 928 aa11.75□□□□□ -0.53
CDHR3-203ENST00000466045 POGZQ7Z3K3 1410 aa11.74□□□□□ -0.53
CDHR3-203ENST00000466045 SLFN14P0C7P3 912 aa11.74□□□□□ -0.53
CDHR3-203ENST00000466045 MFAP1P55081 439 aaKnown RBP11.74□□□□□ -0.53
CDHR3-203ENST00000466045 AMER1Q5JTC6 1135 aaPredicted RBP11.74□□□□□ -0.53
CDHR3-203ENST00000466045 PNISRQ8TF01 805 aaKnown RBP11.74□□□□□ -0.53
CDHR3-203ENST00000466045 ZNF518AQ6AHZ1 1483 aa11.74□□□□□ -0.53
CDHR3-203ENST00000466045 CREBRFQ8IUR6 639 aa11.74□□□□□ -0.53
CDHR3-203ENST00000466045 OGFRQ9NZT2 677 aa11.74□□□□□ -0.53
CDHR3-203ENST00000466045 TRAPPC8Q9Y2L5 1435 aa11.73□□□□□ -0.53
CDHR3-203ENST00000466045 ZMYM3Q14202 1370 aa11.73□□□□□ -0.53
CDHR3-203ENST00000466045 ARHGEF12Q9NZN5 1544 aa11.73□□□□□ -0.53
CDHR3-203ENST00000466045 CRBNQ96SW2 442 aa11.73□□□□□ -0.53
CDHR3-203ENST00000466045 SAMD9LQ8IVG5 1584 aa11.73□□□□□ -0.53
CDHR3-203ENST00000466045 ABCC1P33527 1531 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms