RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 PRAG1Q86YV5 1406 aa12.63□□□□□ -0.39
UBA3-208ENST00000465627 RALGAPBQ86X10 1494 aa12.62□□□□□ -0.39
UBA3-208ENST00000465627 TRPM1Q7Z4N2 1603 aa12.62□□□□□ -0.39
UBA3-208ENST00000465627 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
UBA3-208ENST00000465627 NRXN1Q9ULB1 1477 aa12.62□□□□□ -0.39
UBA3-208ENST00000465627 PPLO60437 1756 aa12.62□□□□□ -0.39
UBA3-208ENST00000465627 CEP350Q5VT06 3117 aa12.61□□□□□ -0.39
UBA3-208ENST00000465627 FBXO31Q5XUX0 539 aaPredicted RBP12.61□□□□□ -0.39
UBA3-208ENST00000465627 MYOM2P54296 1465 aa12.61□□□□□ -0.39
UBA3-208ENST00000465627 AFF2P51816 1311 aa12.61□□□□□ -0.39
UBA3-208ENST00000465627 SLC52A1Q9NWF4 448 aa12.6□□□□□ -0.39
UBA3-208ENST00000465627 MYO5BQ9ULV0 1848 aa12.6□□□□□ -0.39
UBA3-208ENST00000465627 IDI1Q13907 227 aa12.59□□□□□ -0.39
UBA3-208ENST00000465627 STAC3Q96MF2 364 aa12.59□□□□□ -0.39
UBA3-208ENST00000465627 KDM5AP29375 1690 aaKnown RBP12.59□□□□□ -0.39
UBA3-208ENST00000465627 NEXMIFQ5QGS0 1516 aa12.59□□□□□ -0.39
UBA3-208ENST00000465627 SPATA31A6Q5VVP1 1343 aa12.59□□□□□ -0.39
UBA3-208ENST00000465627 LAMC1P11047 1609 aa12.59□□□□□ -0.39
UBA3-208ENST00000465627 KIAA1210Q9ULL0 1709 aa12.58□□□□□ -0.4
UBA3-208ENST00000465627 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
UBA3-208ENST00000465627 DCAF11Q8TEB1 546 aa12.58□□□□□ -0.4
UBA3-208ENST00000465627 GPRASP1Q5JY77 1395 aa12.58□□□□□ -0.4
UBA3-208ENST00000465627 SHPRHQ149N8 1683 aa12.58□□□□□ -0.4
UBA3-208ENST00000465627 RGL3Q3MIN7 710 aa12.57□□□□□ -0.4
UBA3-208ENST00000465627 TNRQ92752 1358 aa12.57□□□□□ -0.4
UBA3-208ENST00000465627 GABBR2O75899 941 aa12.56□□□□□ -0.4
UBA3-208ENST00000465627 RBM6P78332 1123 aaKnown RBP12.56□□□□□ -0.4
UBA3-208ENST00000465627 ZFYVE9O95405 1425 aa12.56□□□□□ -0.4
UBA3-208ENST00000465627 NHSL1Q5SYE7 1610 aa12.56□□□□□ -0.4
UBA3-208ENST00000465627 QTRT2Q9H974 415 aaKnown RBP12.56□□□□□ -0.4
UBA3-208ENST00000465627 THEMISQ8N1K5 641 aaPredicted RBP12.55□□□□□ -0.4
UBA3-208ENST00000465627 RPGRIP1LQ68CZ1 1315 aa12.55□□□□□ -0.4
UBA3-208ENST00000465627 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
UBA3-208ENST00000465627 FARP1Q9Y4F1 1045 aaPredicted RBP12.54□□□□□ -0.4
UBA3-208ENST00000465627 TMEM94Q12767 1356 aa12.54□□□□□ -0.4
UBA3-208ENST00000465627 UBR1Q8IWV7 1749 aa12.54□□□□□ -0.4
UBA3-208ENST00000465627 PIK3C2GO75747 1445 aa12.53□□□□□ -0.4
UBA3-208ENST00000465627 KDM2AQ9Y2K7 1162 aa12.53□□□□□ -0.4
UBA3-208ENST00000465627 NLRP1Q9C000 1473 aa12.52□□□□□ -0.41
UBA3-208ENST00000465627 ADGRF5Q8IZF2 1346 aa12.51□□□□□ -0.41
UBA3-208ENST00000465627 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
UBA3-208ENST00000465627 NBPF1Q3BBV0 1214 aa12.5□□□□□ -0.41
UBA3-208ENST00000465627 ADGRB1O14514 1584 aa12.49□□□□□ -0.41
UBA3-208ENST00000465627 HSPA5P11021 654 aaKnown RBP12.49□□□□□ -0.41
UBA3-208ENST00000465627 DEFB132Q7Z7B7 95 aa12.49□□□□□ -0.41
UBA3-208ENST00000465627 STAG3Q9UJ98 1225 aa12.49□□□□□ -0.41
UBA3-208ENST00000465627 SLAIN2Q9P270 581 aa12.48□□□□□ -0.41
UBA3-208ENST00000465627 USP47Q96K76 1375 aa12.48□□□□□ -0.41
UBA3-208ENST00000465627 EIF4G2P78344 907 aaKnown RBP eCLIP12.47□□□□□ -0.41
UBA3-208ENST00000465627 ZNF326Q5BKZ1 582 aaKnown RBP12.47□□□□□ -0.41
UBA3-208ENST00000465627 NRXN3Q9Y4C0 1643 aa12.47□□□□□ -0.41
UBA3-208ENST00000465627 NWD1Q149M9 1564 aa12.47□□□□□ -0.41
UBA3-208ENST00000465627 ROCK2O75116 1388 aaKnown RBP12.47□□□□□ -0.41
UBA3-208ENST00000465627 ASXL1Q8IXJ9 1541 aa12.47□□□□□ -0.41
UBA3-208ENST00000465627 BCL9LQ86UU0 1499 aa12.46□□□□□ -0.41
UBA3-208ENST00000465627 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.41
UBA3-208ENST00000465627 CCDC125Q86Z20 511 aa12.46□□□□□ -0.41
UBA3-208ENST00000465627 SLIT1O75093 1534 aa12.46□□□□□ -0.42
UBA3-208ENST00000465627 C1QTNF8P60827 252 aa12.45□□□□□ -0.42
UBA3-208ENST00000465627 DIP2AQ14689 1571 aa12.45□□□□□ -0.42
UBA3-208ENST00000465627 C8orf37Q96NL8 207 aa12.45□□□□□ -0.42
UBA3-208ENST00000465627 C14orf93Q9H972 538 aaKnown RBP12.45□□□□□ -0.42
UBA3-208ENST00000465627 RIMS2Q9UQ26 1411 aa12.45□□□□□ -0.42
UBA3-208ENST00000465627 SPDYE4A6NLX3 237 aa12.44□□□□□ -0.42
UBA3-208ENST00000465627 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
UBA3-208ENST00000465627 CHGAP10645 457 aaKnown RBP12.44□□□□□ -0.42
UBA3-208ENST00000465627 HIRIP3Q9BW71 556 aaPredicted RBP12.44□□□□□ -0.42
UBA3-208ENST00000465627 CARD11Q9BXL7 1154 aa12.44□□□□□ -0.42
UBA3-208ENST00000465627 CFAP70Q5T0N1 1121 aa12.43□□□□□ -0.42
UBA3-208ENST00000465627 TMEM2Q9UHN6 1383 aa12.43□□□□□ -0.42
UBA3-208ENST00000465627 SCAF11Q99590 1463 aaKnown RBP12.43□□□□□ -0.42
UBA3-208ENST00000465627 C11orf95C9JLR9 678 aaPredicted RBP12.43□□□□□ -0.42
UBA3-208ENST00000465627 ZNF784Q8NCA9 323 aaPredicted RBP12.43□□□□□ -0.42
UBA3-208ENST00000465627 PROSER2Q86WR7 435 aaPredicted RBP12.42□□□□□ -0.42
UBA3-208ENST00000465627 NGLY1Q96IV0 654 aa12.42□□□□□ -0.42
UBA3-208ENST00000465627 AHDC1Q5TGY3 1603 aaPredicted RBP12.41□□□□□ -0.42
UBA3-208ENST00000465627 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
UBA3-208ENST00000465627 LTKP29376 864 aa12.41□□□□□ -0.42
UBA3-208ENST00000465627 CLCN6P51797 869 aa12.41□□□□□ -0.42
UBA3-208ENST00000465627 TESK2Q96S53 571 aa12.41□□□□□ -0.42
UBA3-208ENST00000465627 ARHGEF28Q8N1W1 1705 aaKnown RBP12.39□□□□□ -0.43
UBA3-208ENST00000465627 CCDC7Q96M83 1385 aa12.39□□□□□ -0.43
UBA3-208ENST00000465627 ST20-MTHFSA0A0A6YYL1 179 aa12.39□□□□□ -0.43
UBA3-208ENST00000465627 SLC34A2O95436 690 aa12.39□□□□□ -0.43
UBA3-208ENST00000465627 MSH6P52701 1360 aa12.37□□□□□ -0.43
UBA3-208ENST00000465627 BLMP54132 1417 aaPredicted RBP12.37□□□□□ -0.43
UBA3-208ENST00000465627 ADAMTS13Q76LX8 1427 aa12.37□□□□□ -0.43
UBA3-208ENST00000465627 DIEXFQ68CQ4 756 aaKnown RBP12.37□□□□□ -0.43
UBA3-208ENST00000465627 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBA3-208ENST00000465627 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
UBA3-208ENST00000465627 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
UBA3-208ENST00000465627 CAMTA1Q9Y6Y1 1673 aa12.37□□□□□ -0.43
UBA3-208ENST00000465627 PLEKHG1Q9ULL1 1385 aa12.36□□□□□ -0.43
UBA3-208ENST00000465627 SBNO2Q9Y2G9 1366 aa12.36□□□□□ -0.43
UBA3-208ENST00000465627 KNDC1Q76NI1 1749 aa12.34□□□□□ -0.43
UBA3-208ENST00000465627 DLC1Q96QB1 1528 aa12.34□□□□□ -0.43
UBA3-208ENST00000465627 YTHDC2Q9H6S0 1430 aaKnown RBP12.34□□□□□ -0.43
UBA3-208ENST00000465627 KCNA6P17658 529 aa12.33□□□□□ -0.44
UBA3-208ENST00000465627 LHX8Q68G74 356 aa12.33□□□□□ -0.44
UBA3-208ENST00000465627 TMEM132EQ6IEE7 984 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms