RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-223ENST00000465143 CLTCL1P53675 1640 aa11.12□□□□□ -0.63
ITSN1-223ENST00000465143 ZEB1P37275 1124 aaPredicted RBP11.11□□□□□ -0.63
ITSN1-223ENST00000465143 PHF12Q96QT6 1004 aa11.11□□□□□ -0.63
ITSN1-223ENST00000465143 SPHKAPQ2M3C7 1700 aa11.11□□□□□ -0.63
ITSN1-223ENST00000465143 MSH6P52701 1360 aa11.11□□□□□ -0.63
ITSN1-223ENST00000465143 ANKRD30BQ9BXX2 1392 aa11.11□□□□□ -0.63
ITSN1-223ENST00000465143 CLSPNQ9HAW4 1339 aa11.1□□□□□ -0.63
ITSN1-223ENST00000465143 METP08581 1390 aa11.1□□□□□ -0.63
ITSN1-223ENST00000465143 NKTRP30414 1462 aaKnown RBP11.1□□□□□ -0.63
ITSN1-223ENST00000465143 SPATA31E1Q6ZUB1 1445 aa11.09□□□□□ -0.63
ITSN1-223ENST00000465143 ADGRF5Q8IZF2 1346 aa11.09□□□□□ -0.63
ITSN1-223ENST00000465143 ATF3P18847 181 aa11.08□□□□□ -0.64
ITSN1-223ENST00000465143 HSPA1LP34931 641 aa11.08□□□□□ -0.64
ITSN1-223ENST00000465143 NEXMIFQ5QGS0 1516 aa11.08□□□□□ -0.64
ITSN1-223ENST00000465143 C19orf44Q9H6X5 657 aa11.07□□□□□ -0.64
ITSN1-223ENST00000465143 DIP2AQ14689 1571 aa11.07□□□□□ -0.64
ITSN1-223ENST00000465143 POTEB2H3BUK9 544 aa11.06□□□□□ -0.64
ITSN1-223ENST00000465143 CADPS2Q86UW7 1296 aa11.06□□□□□ -0.64
ITSN1-223ENST00000465143 SLAIN2Q9P270 581 aa11.06□□□□□ -0.64
ITSN1-223ENST00000465143 PTPRUQ92729 1446 aa11.06□□□□□ -0.64
ITSN1-223ENST00000465143 SETBP1Q9Y6X0 1596 aa11.06□□□□□ -0.64
ITSN1-223ENST00000465143 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
ITSN1-223ENST00000465143 DCAF11Q8TEB1 546 aa11.05□□□□□ -0.64
ITSN1-223ENST00000465143 STK26Q9P289 416 aa11.05□□□□□ -0.64
ITSN1-223ENST00000465143 KDM2AQ9Y2K7 1162 aa11.05□□□□□ -0.64
ITSN1-223ENST00000465143 NCOA3Q9Y6Q9 1424 aa11.05□□□□□ -0.64
ITSN1-223ENST00000465143 NWD1Q149M9 1564 aa11.04□□□□□ -0.64
ITSN1-223ENST00000465143 SIN3AQ96ST3 1273 aa11.04□□□□□ -0.64
ITSN1-223ENST00000465143 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
ITSN1-223ENST00000465143 NEUROD1Q13562 356 aa11.03□□□□□ -0.64
ITSN1-223ENST00000465143 TMEM132EQ6IEE7 984 aa11.03□□□□□ -0.64
ITSN1-223ENST00000465143 OTUD5Q96G74 571 aa11.03□□□□□ -0.64
ITSN1-223ENST00000465143 CFAP70Q5T0N1 1121 aa11.02□□□□□ -0.65
ITSN1-223ENST00000465143 PELP1Q8IZL8 1130 aaKnown RBP11.02□□□□□ -0.65
ITSN1-223ENST00000465143 STAC3Q96MF2 364 aa11.02□□□□□ -0.65
ITSN1-223ENST00000465143 C14orf93Q9H972 538 aaKnown RBP11.02□□□□□ -0.65
ITSN1-223ENST00000465143 FAM135BQ49AJ0 1406 aa11.01□□□□□ -0.65
ITSN1-223ENST00000465143 STRCP1A6NGW2 1772 aa11.01□□□□□ -0.65
ITSN1-223ENST00000465143 MYO5BQ9ULV0 1848 aa11.01□□□□□ -0.65
ITSN1-223ENST00000465143 ROBO2Q9HCK4 1378 aa11.01□□□□□ -0.65
ITSN1-223ENST00000465143 PIK3C2GO75747 1445 aa11.01□□□□□ -0.65
ITSN1-223ENST00000465143 LRPPRCP42704 1394 aaKnown RBP11□□□□□ -0.65
ITSN1-223ENST00000465143 KIF1BO60333 1816 aa11□□□□□ -0.65
ITSN1-223ENST00000465143 PTCH1Q13635 1447 aa11□□□□□ -0.65
ITSN1-223ENST00000465143 ALKQ9UM73 1620 aa10.99□□□□□ -0.65
ITSN1-223ENST00000465143 PLSCR2Q9NRY7 297 aa10.99□□□□□ -0.65
ITSN1-223ENST00000465143 DISP3Q9P2K9 1392 aa10.99□□□□□ -0.65
ITSN1-223ENST00000465143 MYOM2P54296 1465 aa10.99□□□□□ -0.65
ITSN1-223ENST00000465143 NRXN3Q9Y4C0 1643 aa10.98□□□□□ -0.65
ITSN1-223ENST00000465143 WAPLQ7Z5K2 1190 aa10.98□□□□□ -0.65
ITSN1-223ENST00000465143 ABCC11Q96J66 1382 aa10.98□□□□□ -0.65
ITSN1-223ENST00000465143 POGKQ9P215 609 aa10.97□□□□□ -0.65
ITSN1-223ENST00000465143 DCCP43146 1447 aa10.97□□□□□ -0.65
ITSN1-223ENST00000465143 ADGRL3Q9HAR2 1447 aa10.97□□□□□ -0.65
ITSN1-223ENST00000465143 YTHDC2Q9H6S0 1430 aaKnown RBP10.96□□□□□ -0.65
ITSN1-223ENST00000465143 BRINP3Q76B58 766 aa10.96□□□□□ -0.65
ITSN1-223ENST00000465143 NRXN1Q9ULB1 1477 aa10.95□□□□□ -0.66
ITSN1-223ENST00000465143 SAFB2Q14151 953 aaKnown RBP eCLIP10.95□□□□□ -0.66
ITSN1-223ENST00000465143 SIRT1Q96EB6 747 aa10.95□□□□□ -0.66
ITSN1-223ENST00000465143 PRAM1Q96QH2 718 aa10.95□□□□□ -0.66
ITSN1-223ENST00000465143 TRAK1Q9UPV9 953 aa10.95□□□□□ -0.66
ITSN1-223ENST00000465143 TONSLQ96HA7 1378 aa10.94□□□□□ -0.66
ITSN1-223ENST00000465143 PLEKHH1Q9ULM0 1364 aa10.94□□□□□ -0.66
ITSN1-223ENST00000465143 TIMELESSQ9UNS1 1208 aa10.94□□□□□ -0.66
ITSN1-223ENST00000465143 TECPR2O15040 1411 aa10.93□□□□□ -0.66
ITSN1-223ENST00000465143 PRAG1Q86YV5 1406 aa10.93□□□□□ -0.66
ITSN1-223ENST00000465143 CHD2O14647 1828 aaKnown RBP10.93□□□□□ -0.66
ITSN1-223ENST00000465143 XRN1Q8IZH2 1706 aaKnown RBP10.93□□□□□ -0.66
ITSN1-223ENST00000465143 NUTM2FA1L443 756 aa10.93□□□□□ -0.66
ITSN1-223ENST00000465143 L3MBTL2Q969R5 705 aa10.93□□□□□ -0.66
ITSN1-223ENST00000465143 PPLO60437 1756 aa10.93□□□□□ -0.66
ITSN1-223ENST00000465143 MST1RQ04912 1400 aa10.92□□□□□ -0.66
ITSN1-223ENST00000465143 ESCO1Q5FWF5 840 aa10.92□□□□□ -0.66
ITSN1-223ENST00000465143 MS4A3Q96HJ5 214 aa10.92□□□□□ -0.66
ITSN1-223ENST00000465143 ORAI2Q96SN7 254 aa10.91□□□□□ -0.66
ITSN1-223ENST00000465143 C1orf167Q5SNV9 1468 aa10.91□□□□□ -0.66
ITSN1-223ENST00000465143 JCADQ9P266 1359 aa10.9□□□□□ -0.66
ITSN1-223ENST00000465143 DDX17Q92841 729 aaKnown RBP10.9□□□□□ -0.66
ITSN1-223ENST00000465143 ASXL1Q8IXJ9 1541 aa10.89□□□□□ -0.67
ITSN1-223ENST00000465143 MINK1Q8N4C8 1332 aaPredicted RBP10.89□□□□□ -0.67
ITSN1-223ENST00000465143 MEX3CQ5U5Q3 659 aaKnown RBP10.89□□□□□ -0.67
ITSN1-223ENST00000465143 LRRC59Q96AG4 307 aaKnown RBP10.89□□□□□ -0.67
ITSN1-223ENST00000465143 HIRIP3Q9BW71 556 aaPredicted RBP10.89□□□□□ -0.67
ITSN1-223ENST00000465143 TSPYL2Q9H2G4 693 aaPredicted RBP10.89□□□□□ -0.67
ITSN1-223ENST00000465143 ROBO1Q9Y6N7 1651 aa10.89□□□□□ -0.67
ITSN1-223ENST00000465143 NBPF1Q3BBV0 1214 aa10.88□□□□□ -0.67
ITSN1-223ENST00000465143 XIRP1Q702N8 1843 aaKnown RBP10.88□□□□□ -0.67
ITSN1-223ENST00000465143 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.87□□□□□ -0.67
ITSN1-223ENST00000465143 NUTM2BA6NNL0 878 aaPredicted RBP10.87□□□□□ -0.67
ITSN1-223ENST00000465143 NUTM2EB1AL46 878 aaPredicted RBP10.87□□□□□ -0.67
ITSN1-223ENST00000465143 ATMINO43313 823 aaPredicted RBP10.87□□□□□ -0.67
ITSN1-223ENST00000465143 FOXO3O43524 673 aa10.87□□□□□ -0.67
ITSN1-223ENST00000465143 NUTM2AQ8IVF1 878 aaPredicted RBP10.87□□□□□ -0.67
ITSN1-223ENST00000465143 SPATA31A6Q5VVP1 1343 aa10.86□□□□□ -0.67
ITSN1-223ENST00000465143 NPHP3Q7Z494 1330 aa10.86□□□□□ -0.67
ITSN1-223ENST00000465143 POTEJP0CG39 1038 aa10.86□□□□□ -0.67
ITSN1-223ENST00000465143 XPCQ01831 940 aaPredicted RBP10.86□□□□□ -0.67
ITSN1-223ENST00000465143 ASTLQ6HA08 431 aaPredicted RBP10.86□□□□□ -0.67
ITSN1-223ENST00000465143 SETD1AO15047 1707 aaKnown RBP10.86□□□□□ -0.67
ITSN1-223ENST00000465143 ADGRB1O14514 1584 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms