RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 ERICH6BQ5W0A0 696 aa29.09■■■□□ 2.25
PDLIM2-216ENST00000464275 POGKQ9P215 609 aa29.09■■■□□ 2.25
PDLIM2-216ENST00000464275 NUDCQ9Y266 331 aa29.09■■■□□ 2.25
PDLIM2-216ENST00000464275 PRAM1Q96QH2 718 aa29.08■■■□□ 2.25
PDLIM2-216ENST00000464275 NINLQ9Y2I6 1382 aa29.08■■■□□ 2.25
PDLIM2-216ENST00000464275 KNDC1Q76NI1 1749 aa29.08■■■□□ 2.25
PDLIM2-216ENST00000464275 SAFB2Q14151 953 aaKnown RBP eCLIP29.08■■■□□ 2.25
PDLIM2-216ENST00000464275 NLRP1Q9C000 1473 aa29.07■■■□□ 2.24
PDLIM2-216ENST00000464275 ANKRD36BQ8N2N9 1353 aa29.06■■■□□ 2.24
PDLIM2-216ENST00000464275 CABP2Q9NPB3 220 aa29.05■■■□□ 2.24
PDLIM2-216ENST00000464275 BCANQ96GW7 911 aa29.04■■■□□ 2.24
PDLIM2-216ENST00000464275 ATAD2Q6PL18 1390 aa29.03■■■□□ 2.24
PDLIM2-216ENST00000464275 ABCC11Q96J66 1382 aa29.03■■■□□ 2.24
PDLIM2-216ENST00000464275 TMEM2Q9UHN6 1383 aa29.03■■■□□ 2.24
PDLIM2-216ENST00000464275 MINK1Q8N4C8 1332 aaPredicted RBP29.02■■■□□ 2.24
PDLIM2-216ENST00000464275 SRPK2P78362 688 aaKnown RBP29.01■■■□□ 2.23
PDLIM2-216ENST00000464275 WDR43Q15061 677 aaKnown RBP eCLIP29.01■■■□□ 2.23
PDLIM2-216ENST00000464275 PDE3BQ13370 1112 aa28.99■■■□□ 2.23
PDLIM2-216ENST00000464275 CGNL1Q0VF96 1302 aa28.99■■■□□ 2.23
PDLIM2-216ENST00000464275 ADAMTS8Q9UP79 889 aa28.98■■■□□ 2.23
PDLIM2-216ENST00000464275 NSD2O96028 1365 aa28.98■■■□□ 2.23
PDLIM2-216ENST00000464275 SENP3-EIF4A1A0A087X0R7 540 aa28.97■■■□□ 2.23
PDLIM2-216ENST00000464275 ANKRD26Q9UPS8 1709 aa28.96■■■□□ 2.23
PDLIM2-216ENST00000464275 MORC1Q86VD1 984 aa28.96■■■□□ 2.23
PDLIM2-216ENST00000464275 METP08581 1390 aa28.94■■■□□ 2.22
PDLIM2-216ENST00000464275 CEBPAP49715 358 aaPredicted RBP28.93■■■□□ 2.22
PDLIM2-216ENST00000464275 CPS1P31327 1500 aa28.93■■■□□ 2.22
PDLIM2-216ENST00000464275 CDK19Q9BWU1 502 aa28.93■■■□□ 2.22
PDLIM2-216ENST00000464275 POLR3AO14802 1390 aaPredicted RBP28.93■■■□□ 2.22
PDLIM2-216ENST00000464275 TECPR2O15040 1411 aa28.92■■■□□ 2.22
PDLIM2-216ENST00000464275 A0A1W2PP64 1363 aa28.92■■■□□ 2.22
PDLIM2-216ENST00000464275 SIRT1Q96EB6 747 aa28.92■■■□□ 2.22
PDLIM2-216ENST00000464275 FAM135BQ49AJ0 1406 aa28.9■■■□□ 2.22
PDLIM2-216ENST00000464275 WAPLQ7Z5K2 1190 aa28.9■■■□□ 2.22
PDLIM2-216ENST00000464275 TERF2IPQ9NYB0 399 aa28.9■■■□□ 2.22
PDLIM2-216ENST00000464275 PLEKHG1Q9ULL1 1385 aa28.9■■■□□ 2.22
PDLIM2-216ENST00000464275 PLEKHH1Q9ULM0 1364 aa28.9■■■□□ 2.22
PDLIM2-216ENST00000464275 KIF20BQ96Q89 1820 aa28.89■■■□□ 2.22
PDLIM2-216ENST00000464275 SHPRHQ149N8 1683 aa28.89■■■□□ 2.22
PDLIM2-216ENST00000464275 SALL2Q9Y467 1007 aaPredicted RBP28.89■■■□□ 2.22
PDLIM2-216ENST00000464275 SLIT1O75093 1534 aa28.89■■■□□ 2.21
PDLIM2-216ENST00000464275 CD163L1Q9NR16 1453 aa28.88■■■□□ 2.21
PDLIM2-216ENST00000464275 IRX6P78412 446 aaPredicted RBP28.88■■■□□ 2.21
PDLIM2-216ENST00000464275 RNF123Q5XPI4 1314 aa28.87■■■□□ 2.21
PDLIM2-216ENST00000464275 ADAMTS13Q76LX8 1427 aa28.87■■■□□ 2.21
PDLIM2-216ENST00000464275 ARHGAP23Q9P227 1491 aa28.86■■■□□ 2.21
PDLIM2-216ENST00000464275 HDGFL2Q7Z4V5 671 aaPredicted RBP28.83■■■□□ 2.21
PDLIM2-216ENST00000464275 MED14O60244 1454 aa28.83■■■□□ 2.21
PDLIM2-216ENST00000464275 ATP7BP35670 1465 aa28.82■■■□□ 2.2
PDLIM2-216ENST00000464275 LTKP29376 864 aa28.82■■■□□ 2.2
PDLIM2-216ENST00000464275 RIMS1Q86UR5 1692 aaKnown RBP28.82■■■□□ 2.2
PDLIM2-216ENST00000464275 TXNDC2Q86VQ3 553 aa28.81■■■□□ 2.2
PDLIM2-216ENST00000464275 EID1Q9Y6B2 187 aa28.81■■■□□ 2.2
PDLIM2-216ENST00000464275 WASLO00401 505 aaPredicted RBP28.79■■■□□ 2.2
PDLIM2-216ENST00000464275 TNNT2P45379 298 aaPredicted RBP28.79■■■□□ 2.2
PDLIM2-216ENST00000464275 CABP1Q9NZU7 370 aa28.78■■■□□ 2.2
PDLIM2-216ENST00000464275 PPP4R2Q9NY27 417 aa28.77■■■□□ 2.2
PDLIM2-216ENST00000464275 THEMISQ8N1K5 641 aaPredicted RBP28.76■■■□□ 2.19
PDLIM2-216ENST00000464275 CFAP53Q96M91 514 aa28.76■■■□□ 2.19
PDLIM2-216ENST00000464275 ADGRB2O60241 1585 aa28.76■■■□□ 2.19
PDLIM2-216ENST00000464275 PLPPR3Q6T4P5 718 aa28.75■■■□□ 2.19
PDLIM2-216ENST00000464275 CDCA7LQ96GN5 454 aa28.75■■■□□ 2.19
PDLIM2-216ENST00000464275 DIP2AQ14689 1571 aa28.75■■■□□ 2.19
PDLIM2-216ENST00000464275 MTHFSP49914 203 aa28.75■■■□□ 2.19
PDLIM2-216ENST00000464275 AKAP12Q02952 1782 aa28.74■■■□□ 2.19
PDLIM2-216ENST00000464275 ITSN1Q15811 1721 aa28.74■■■□□ 2.19
PDLIM2-216ENST00000464275 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.73■■■□□ 2.19
PDLIM2-216ENST00000464275 NGEFQ8N5V2 710 aa28.73■■■□□ 2.19
PDLIM2-216ENST00000464275 ZNF521Q96K83 1311 aa28.72■■■□□ 2.19
PDLIM2-216ENST00000464275 CEP170BQ9Y4F5 1589 aaPredicted RBP28.72■■■□□ 2.19
PDLIM2-216ENST00000464275 FYB1O15117 783 aa28.72■■■□□ 2.19
PDLIM2-216ENST00000464275 CCDC146Q8IYE0 955 aa28.72■■■□□ 2.19
PDLIM2-216ENST00000464275 MON2Q7Z3U7 1717 aa28.72■■■□□ 2.19
PDLIM2-216ENST00000464275 ADAMTSL3P82987 1691 aa28.72■■■□□ 2.19
PDLIM2-216ENST00000464275 ROBO2Q9HCK4 1378 aa28.72■■■□□ 2.19
PDLIM2-216ENST00000464275 RCAN3Q9UKA8 241 aa28.71■■■□□ 2.19
PDLIM2-216ENST00000464275 GGNBP2Q9H3C7 697 aa28.7■■■□□ 2.19
PDLIM2-216ENST00000464275 PPIP5K1Q6PFW1 1433 aa28.7■■■□□ 2.19
PDLIM2-216ENST00000464275 CDC42BPGQ6DT37 1551 aa28.7■■■□□ 2.18
PDLIM2-216ENST00000464275 TBX22Q9Y458 520 aa28.68■■■□□ 2.18
PDLIM2-216ENST00000464275 CPSF1Q10570 1443 aaKnown RBP28.68■■■□□ 2.18
PDLIM2-216ENST00000464275 RBM19Q9Y4C8 960 aaKnown RBP28.68■■■□□ 2.18
PDLIM2-216ENST00000464275 ZNF142P52746 1687 aaPredicted RBP28.67■■■□□ 2.18
PDLIM2-216ENST00000464275 APAF1O14727 1248 aa28.67■■■□□ 2.18
PDLIM2-216ENST00000464275 PTPRUQ92729 1446 aa28.67■■■□□ 2.18
PDLIM2-216ENST00000464275 NUDT16Q96DE0 195 aaKnown RBP28.66■■■□□ 2.18
PDLIM2-216ENST00000464275 GOLGA2Q08379 1002 aa28.66■■■□□ 2.18
PDLIM2-216ENST00000464275 TOPAZ1Q8N9V7 1692 aa28.65■■■□□ 2.18
PDLIM2-216ENST00000464275 SETD1BQ9UPS6 1966 aaKnown RBP28.65■■■□□ 2.18
PDLIM2-216ENST00000464275 EDC4Q6P2E9 1401 aaKnown RBP28.64■■■□□ 2.18
PDLIM2-216ENST00000464275 SLC26A8Q96RN1 970 aa28.64■■■□□ 2.18
PDLIM2-216ENST00000464275 RRP1P56182 461 aaKnown RBP28.64■■■□□ 2.17
PDLIM2-216ENST00000464275 MAP2P11137 1827 aaKnown RBP28.63■■■□□ 2.17
PDLIM2-216ENST00000464275 CCDC61Q9Y6R9 512 aa28.63■■■□□ 2.17
PDLIM2-216ENST00000464275 RUNDC1Q96C34 613 aa28.61■■■□□ 2.17
PDLIM2-216ENST00000464275 XRN1Q8IZH2 1706 aaKnown RBP28.61■■■□□ 2.17
PDLIM2-216ENST00000464275 COL3A1P02461 1466 aaPredicted RBP28.6■■■□□ 2.17
PDLIM2-216ENST00000464275 PTCH1Q13635 1447 aa28.6■■■□□ 2.17
PDLIM2-216ENST00000464275 IQSEC2Q5JU85 1478 aa28.59■■■□□ 2.17
PDLIM2-216ENST00000464275 DUSP27Q5VZP5 1158 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms