RNA–Protein interactions for RNA: ENST00000464266.1

HOXB3-203, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-203ENST00000464266 GNEQ9Y223 722 aaKnown RBP8.19□□□□□ -1.1
HOXB3-203ENST00000464266 HOXA2O43364 376 aa8.18□□□□□ -1.1
HOXB3-203ENST00000464266 PRR7Q8TB68 274 aa8.18□□□□□ -1.1
HOXB3-203ENST00000464266 MAFBQ9Y5Q3 323 aaPredicted RBP8.18□□□□□ -1.1
HOXB3-203ENST00000464266 RSPH4AQ5TD94 716 aa8.17□□□□□ -1.1
HOXB3-203ENST00000464266 LRRN4Q8WUT4 740 aa8.17□□□□□ -1.1
HOXB3-203ENST00000464266 USP35Q9P2H5 1018 aa8.17□□□□□ -1.1
HOXB3-203ENST00000464266 PNMA3Q9UL41 463 aa8.17□□□□□ -1.1
HOXB3-203ENST00000464266 MTMR2Q13614 643 aa8.16□□□□□ -1.1
HOXB3-203ENST00000464266 SLC39A7Q92504 469 aa8.16□□□□□ -1.1
HOXB3-203ENST00000464266 TSKSQ9UJT2 592 aa8.16□□□□□ -1.1
HOXB3-203ENST00000464266 BAZ1AQ9NRL2 1556 aaPredicted RBP8.15□□□□□ -1.1
HOXB3-203ENST00000464266 DCAF1Q9Y4B6 1507 aa8.15□□□□□ -1.1
HOXB3-203ENST00000464266 HAX1O00165 279 aa8.15□□□□□ -1.1
HOXB3-203ENST00000464266 COL9A1P20849 921 aa8.15□□□□□ -1.1
HOXB3-203ENST00000464266 GCGRP47871 477 aa8.15□□□□□ -1.1
HOXB3-203ENST00000464266 PNMA1Q8ND90 353 aa8.15□□□□□ -1.1
HOXB3-203ENST00000464266 CCER1Q8TC90 406 aaPredicted RBP8.15□□□□□ -1.1
HOXB3-203ENST00000464266 TATDN2Q93075 761 aa8.15□□□□□ -1.1
HOXB3-203ENST00000464266 PCDHGC3Q9UN70 934 aa8.15□□□□□ -1.1
HOXB3-203ENST00000464266 NUDT7P0C024 238 aa8.14□□□□□ -1.11
HOXB3-203ENST00000464266 TBC1D9Q6ZT07 1266 aa8.14□□□□□ -1.11
HOXB3-203ENST00000464266 PACS2Q86VP3 889 aa8.14□□□□□ -1.11
HOXB3-203ENST00000464266 PELP1Q8IZL8 1130 aaKnown RBP8.14□□□□□ -1.11
HOXB3-203ENST00000464266 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.14□□□□□ -1.11
HOXB3-203ENST00000464266 RBM47A0AV96 593 aaKnown RBP8.13□□□□□ -1.11
HOXB3-203ENST00000464266 C3orf80F5H4A9 247 aa8.13□□□□□ -1.11
HOXB3-203ENST00000464266 ATP9BO43861 1147 aa8.13□□□□□ -1.11
HOXB3-203ENST00000464266 EIF4G2P78344 907 aaKnown RBP eCLIP8.13□□□□□ -1.11
HOXB3-203ENST00000464266 GUCA2AQ02747 115 aa8.13□□□□□ -1.11
HOXB3-203ENST00000464266 EPS8L1Q8TE68 723 aa8.13□□□□□ -1.11
HOXB3-203ENST00000464266 NESP48681 1621 aa8.12□□□□□ -1.11
HOXB3-203ENST00000464266 POTEFA5A3E0 1075 aa8.12□□□□□ -1.11
HOXB3-203ENST00000464266 UNCXA6NJT0 531 aa8.12□□□□□ -1.11
HOXB3-203ENST00000464266 C7P10643 843 aa8.12□□□□□ -1.11
HOXB3-203ENST00000464266 PPP1R3GB7ZBB8 358 aa8.11□□□□□ -1.11
HOXB3-203ENST00000464266 CFAP99D6REC4 459 aa8.11□□□□□ -1.11
HOXB3-203ENST00000464266 ELOAQ14241 798 aaKnown RBP8.11□□□□□ -1.11
HOXB3-203ENST00000464266 SLF2Q8IX21 1173 aa8.11□□□□□ -1.11
HOXB3-203ENST00000464266 RIMBP3CA6NJZ7 1639 aa8.11□□□□□ -1.11
HOXB3-203ENST00000464266 RIMBP3BA6NNM3 1639 aa8.11□□□□□ -1.11
HOXB3-203ENST00000464266 RIMBP3Q9UFD9 1639 aa8.11□□□□□ -1.11
HOXB3-203ENST00000464266 TRIM6-TRIM34B2RNG4 842 aa8.1□□□□□ -1.11
HOXB3-203ENST00000464266 C6orf229H3BNL8 230 aa8.1□□□□□ -1.11
HOXB3-203ENST00000464266 EVX2Q03828 476 aa8.1□□□□□ -1.11
HOXB3-203ENST00000464266 PPP4R3BQ5MIZ7 849 aa8.1□□□□□ -1.11
HOXB3-203ENST00000464266 HLA-CQ95604 372 aa8.1□□□□□ -1.11
HOXB3-203ENST00000464266 DCBLD2Q96PD2 775 aa8.1□□□□□ -1.11
HOXB3-203ENST00000464266 HMGB1P09429 215 aaKnown RBP8.09□□□□□ -1.11
HOXB3-203ENST00000464266 ERCC3P19447 782 aa8.09□□□□□ -1.11
HOXB3-203ENST00000464266 PTPREP23469 700 aa8.09□□□□□ -1.11
HOXB3-203ENST00000464266 ARSIQ5FYB1 569 aa8.09□□□□□ -1.11
HOXB3-203ENST00000464266 TMEM164Q5U3C3 297 aa8.09□□□□□ -1.11
HOXB3-203ENST00000464266 KHSRPQ92945 711 aaKnown RBP eCLIP8.09□□□□□ -1.11
HOXB3-203ENST00000464266 BCL2L12Q9HB09 334 aa8.09□□□□□ -1.11
HOXB3-203ENST00000464266 SMARCA2P51531 1590 aa8.09□□□□□ -1.11
HOXB3-203ENST00000464266 NCAPD3P42695 1498 aa8.08□□□□□ -1.12
HOXB3-203ENST00000464266 SMAPO00193 183 aa8.08□□□□□ -1.12
HOXB3-203ENST00000464266 NR6A1Q15406 480 aa8.08□□□□□ -1.12
HOXB3-203ENST00000464266 KANK4Q5T7N3 995 aaPredicted RBP8.08□□□□□ -1.12
HOXB3-203ENST00000464266 TXNDC2Q86VQ3 553 aa8.08□□□□□ -1.12
HOXB3-203ENST00000464266 GRIPAP1Q4V328 841 aa8.07□□□□□ -1.12
HOXB3-203ENST00000464266 STK32AQ8WU08 396 aa8.07□□□□□ -1.12
HOXB3-203ENST00000464266 METRNQ9UJH8 293 aa8.07□□□□□ -1.12
HOXB3-203ENST00000464266 ZMIZ1Q9ULJ6 1067 aa8.07□□□□□ -1.12
HOXB3-203ENST00000464266 NOVA2Q9UNW9 492 aaKnown RBP8.07□□□□□ -1.12
HOXB3-203ENST00000464266 ZCCHC6Q5VYS8 1495 aaKnown RBP8.06□□□□□ -1.12
HOXB3-203ENST00000464266 KIF21AQ7Z4S6 1674 aa8.06□□□□□ -1.12
HOXB3-203ENST00000464266 ARID4AP29374 1257 aaPredicted RBP8.06□□□□□ -1.12
HOXB3-203ENST00000464266 DOK7Q18PE1 504 aa8.06□□□□□ -1.12
HOXB3-203ENST00000464266 PSDA5PKW4 1024 aaPredicted RBP8.05□□□□□ -1.12
HOXB3-203ENST00000464266 RIMBP2O15034 1052 aa8.05□□□□□ -1.12
HOXB3-203ENST00000464266 SLC10A3P09131 477 aa8.05□□□□□ -1.12
HOXB3-203ENST00000464266 NR1H3Q13133 447 aa8.05□□□□□ -1.12
HOXB3-203ENST00000464266 MRRFQ96E11 262 aaKnown RBP8.05□□□□□ -1.12
HOXB3-203ENST00000464266 IGSF5Q9NSI5 407 aa8.05□□□□□ -1.12
HOXB3-203ENST00000464266 NFATC2IPQ8NCF5 419 aa8.04□□□□□ -1.12
HOXB3-203ENST00000464266 LHX6Q9UPM6 363 aa8.04□□□□□ -1.12
HOXB3-203ENST00000464266 LAMC3Q9Y6N6 1575 aa8.04□□□□□ -1.12
HOXB3-203ENST00000464266 HMGXB3Q12766 1538 aa8.03□□□□□ -1.12
HOXB3-203ENST00000464266 USP17L3A6NCW0 530 aa8.03□□□□□ -1.12
HOXB3-203ENST00000464266 USP17L4A6NCW7 530 aa8.03□□□□□ -1.12
HOXB3-203ENST00000464266 SKIP12755 728 aa8.03□□□□□ -1.12
HOXB3-203ENST00000464266 PHLDB3Q6NSJ2 640 aa8.03□□□□□ -1.12
HOXB3-203ENST00000464266 USP17L2Q6R6M4 530 aa8.03□□□□□ -1.12
HOXB3-203ENST00000464266 DNAJC14Q6Y2X3 702 aaPredicted RBP8.03□□□□□ -1.12
HOXB3-203ENST00000464266 USP17L1Q7RTZ2 530 aa8.03□□□□□ -1.12
HOXB3-203ENST00000464266 ZSWIM6Q9HCJ5 1215 aa8.03□□□□□ -1.12
HOXB3-203ENST00000464266 PIK3CDO00329 1044 aa8.02□□□□□ -1.13
HOXB3-203ENST00000464266 HSP90B1P14625 803 aaKnown RBP8.02□□□□□ -1.13
HOXB3-203ENST00000464266 SSFA2P28290 1259 aa8.02□□□□□ -1.13
HOXB3-203ENST00000464266 SLC4A3P48751 1232 aa8.02□□□□□ -1.13
HOXB3-203ENST00000464266 SWT1Q5T5J6 900 aaKnown RBP8.02□□□□□ -1.13
HOXB3-203ENST00000464266 SIRT1Q96EB6 747 aa8.02□□□□□ -1.13
HOXB3-203ENST00000464266 KIAA1522Q9P206 1035 aaPredicted RBP8.02□□□□□ -1.13
HOXB3-203ENST00000464266 FAM196BA6NMK8 535 aa8.01□□□□□ -1.13
HOXB3-203ENST00000464266 USP17L5A8MUK1 530 aa8.01□□□□□ -1.13
HOXB3-203ENST00000464266 PER1O15534 1290 aaPredicted RBP8.01□□□□□ -1.13
HOXB3-203ENST00000464266 GABBR2O75899 941 aa8.01□□□□□ -1.13
HOXB3-203ENST00000464266 HDGFP51858 240 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms