RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ATAD2Q6PL18 1390 aa5.05□□□□□ -1.6
COL8A1-205ENST00000463753 PHF8Q9UPP1 1060 aa5.04□□□□□ -1.6
COL8A1-205ENST00000463753 COL24A1Q17RW2 1714 aa5.04□□□□□ -1.6
COL8A1-205ENST00000463753 SLIT1O75093 1534 aa5.04□□□□□ -1.6
COL8A1-205ENST00000463753 SPRYD3Q8NCJ5 442 aa5.04□□□□□ -1.6
COL8A1-205ENST00000463753 DISP2A7MBM2 1401 aa5.04□□□□□ -1.6
COL8A1-205ENST00000463753 PDIA4P13667 645 aaKnown RBP5.03□□□□□ -1.6
COL8A1-205ENST00000463753 METRNQ9UJH8 293 aa5.03□□□□□ -1.6
COL8A1-205ENST00000463753 UBAP1LF5GYI3 381 aa5.03□□□□□ -1.6
COL8A1-205ENST00000463753 GOLGA2Q08379 1002 aa5.03□□□□□ -1.6
COL8A1-205ENST00000463753 TIAM1Q13009 1591 aa5.03□□□□□ -1.6
COL8A1-205ENST00000463753 KIF27Q86VH2 1401 aa5.03□□□□□ -1.6
COL8A1-205ENST00000463753 JCADQ9P266 1359 aa5.03□□□□□ -1.6
COL8A1-205ENST00000463753 ROBO1Q9Y6N7 1651 aa5.02□□□□□ -1.61
COL8A1-205ENST00000463753 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.02□□□□□ -1.61
COL8A1-205ENST00000463753 CDK11AQ9UQ88 783 aaPredicted RBP5.02□□□□□ -1.61
COL8A1-205ENST00000463753 INO80Q9ULG1 1556 aaPredicted RBP5.02□□□□□ -1.61
COL8A1-205ENST00000463753 NCOA2Q15596 1464 aa5.02□□□□□ -1.61
COL8A1-205ENST00000463753 BCL9LQ86UU0 1499 aa5.02□□□□□ -1.61
COL8A1-205ENST00000463753 HSPA1LP34931 641 aa5.02□□□□□ -1.61
COL8A1-205ENST00000463753 COLQQ9Y215 455 aaPredicted RBP5.02□□□□□ -1.61
COL8A1-205ENST00000463753 PLCH2O75038 1416 aa5.02□□□□□ -1.61
COL8A1-205ENST00000463753 RBM10P98175 930 aaKnown RBP5.01□□□□□ -1.61
COL8A1-205ENST00000463753 NOP58Q9Y2X3 529 aaKnown RBP5.01□□□□□ -1.61
COL8A1-205ENST00000463753 RREB1Q92766 1687 aa5.01□□□□□ -1.61
COL8A1-205ENST00000463753 FGD1P98174 961 aa5.01□□□□□ -1.61
COL8A1-205ENST00000463753 CHD4Q14839 1912 aa5□□□□□ -1.61
COL8A1-205ENST00000463753 NINLQ9Y2I6 1382 aa5□□□□□ -1.61
COL8A1-205ENST00000463753 PLCG2P16885 1265 aa5□□□□□ -1.61
COL8A1-205ENST00000463753 L3MBTL3Q96JM7 780 aaPredicted RBP5□□□□□ -1.61
COL8A1-205ENST00000463753 PREX2Q70Z35 1606 aa5□□□□□ -1.61
COL8A1-205ENST00000463753 EIF2AK4Q9P2K8 1649 aaKnown RBP5□□□□□ -1.61
COL8A1-205ENST00000463753 KIDINS220Q9ULH0 1771 aa5□□□□□ -1.61
COL8A1-205ENST00000463753 UGGT1Q9NYU2 1555 aa5□□□□□ -1.61
COL8A1-205ENST00000463753 PPP1R37O75864 691 aa5□□□□□ -1.61
COL8A1-205ENST00000463753 BRPF3Q9ULD4 1205 aa5□□□□□ -1.61
COL8A1-205ENST00000463753 GPATCH8Q9UKJ3 1502 aaKnown RBP4.99□□□□□ -1.61
COL8A1-205ENST00000463753 DCCP43146 1447 aa4.99□□□□□ -1.61
COL8A1-205ENST00000463753 IGF1RP08069 1367 aa4.99□□□□□ -1.61
COL8A1-205ENST00000463753 PAXIP1Q6ZW49 1069 aaPredicted RBP4.99□□□□□ -1.61
COL8A1-205ENST00000463753 ABCC1P33527 1531 aa4.99□□□□□ -1.61
COL8A1-205ENST00000463753 PZPP20742 1482 aa4.99□□□□□ -1.61
COL8A1-205ENST00000463753 AAMPQ13685 434 aa4.98□□□□□ -1.61
COL8A1-205ENST00000463753 KCNH8Q96L42 1107 aa4.98□□□□□ -1.61
COL8A1-205ENST00000463753 MAP3K1Q13233 1512 aa4.98□□□□□ -1.61
COL8A1-205ENST00000463753 ADGRB2O60241 1585 aa4.98□□□□□ -1.61
COL8A1-205ENST00000463753 CLTCQ00610 1675 aaKnown RBP4.98□□□□□ -1.61
COL8A1-205ENST00000463753 PTCH1Q13635 1447 aa4.98□□□□□ -1.61
COL8A1-205ENST00000463753 PARD3Q8TEW0 1356 aa4.98□□□□□ -1.61
COL8A1-205ENST00000463753 LRP6O75581 1613 aa4.98□□□□□ -1.61
COL8A1-205ENST00000463753 KIF3CO14782 793 aa4.98□□□□□ -1.61
COL8A1-205ENST00000463753 POTEJP0CG39 1038 aa4.98□□□□□ -1.61
COL8A1-205ENST00000463753 MICALL2Q8IY33 904 aa4.98□□□□□ -1.61
COL8A1-205ENST00000463753 BOLA1Q9Y3E2 137 aa4.98□□□□□ -1.61
COL8A1-205ENST00000463753 IRX6P78412 446 aaPredicted RBP4.97□□□□□ -1.61
COL8A1-205ENST00000463753 MFSD10Q14728 455 aa4.97□□□□□ -1.61
COL8A1-205ENST00000463753 SAMD9LQ8IVG5 1584 aa4.97□□□□□ -1.61
COL8A1-205ENST00000463753 SETBP1Q9Y6X0 1596 aa4.97□□□□□ -1.61
COL8A1-205ENST00000463753 RAPGEF3O95398 923 aa4.97□□□□□ -1.61
COL8A1-205ENST00000463753 DPY19L2Q6NUT2 758 aa4.97□□□□□ -1.61
COL8A1-205ENST00000463753 RSPH6AQ9H0K4 717 aa4.97□□□□□ -1.61
COL8A1-205ENST00000463753 NPHP4O75161 1426 aaPredicted RBP4.97□□□□□ -1.61
COL8A1-205ENST00000463753 POTEB2H3BUK9 544 aa4.96□□□□□ -1.61
COL8A1-205ENST00000463753 CRISPLD2Q9H0B8 497 aa4.96□□□□□ -1.61
COL8A1-205ENST00000463753 RPRD2Q5VT52 1461 aaKnown RBP4.96□□□□□ -1.62
COL8A1-205ENST00000463753 NWD2Q9ULI1 1742 aa4.96□□□□□ -1.62
COL8A1-205ENST00000463753 SEC24BO95487 1268 aa4.95□□□□□ -1.62
COL8A1-205ENST00000463753 QSER1Q2KHR3 1735 aa4.95□□□□□ -1.62
COL8A1-205ENST00000463753 UBR1Q8IWV7 1749 aa4.95□□□□□ -1.62
COL8A1-205ENST00000463753 SETD5Q9C0A6 1442 aa4.95□□□□□ -1.62
COL8A1-205ENST00000463753 KIAA1210Q9ULL0 1709 aa4.95□□□□□ -1.62
COL8A1-205ENST00000463753 RTEL1-TNFRSF6BF6WH68 1400 aa4.95□□□□□ -1.62
COL8A1-205ENST00000463753 USP32Q8NFA0 1604 aa4.95□□□□□ -1.62
COL8A1-205ENST00000463753 NEFMP07197 916 aa4.95□□□□□ -1.62
COL8A1-205ENST00000463753 PRDM15P57071 1507 aaPredicted RBP4.94□□□□□ -1.62
COL8A1-205ENST00000463753 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.94□□□□□ -1.62
COL8A1-205ENST00000463753 MAMSTRQ6ZN01 415 aa4.94□□□□□ -1.62
COL8A1-205ENST00000463753 CFAP44Q96MT7 982 aa4.94□□□□□ -1.62
COL8A1-205ENST00000463753 BLMP54132 1417 aaPredicted RBP4.94□□□□□ -1.62
COL8A1-205ENST00000463753 PRAG1Q86YV5 1406 aa4.94□□□□□ -1.62
COL8A1-205ENST00000463753 SCAF11Q99590 1463 aaKnown RBP4.94□□□□□ -1.62
COL8A1-205ENST00000463753 SYCP2Q9BX26 1530 aa4.94□□□□□ -1.62
COL8A1-205ENST00000463753 CADPS2Q86UW7 1296 aa4.94□□□□□ -1.62
COL8A1-205ENST00000463753 TRIM52Q96A61 297 aa4.93□□□□□ -1.62
COL8A1-205ENST00000463753 NCKAP5LQ9HCH0 1330 aa4.93□□□□□ -1.62
COL8A1-205ENST00000463753 LAS1LQ9Y4W2 734 aaKnown RBP4.93□□□□□ -1.62
COL8A1-205ENST00000463753 CHD2O14647 1828 aaKnown RBP4.93□□□□□ -1.62
COL8A1-205ENST00000463753 MAP3K5Q99683 1374 aa4.93□□□□□ -1.62
COL8A1-205ENST00000463753 ARIH1Q9Y4X5 557 aaPredicted RBP4.92□□□□□ -1.62
COL8A1-205ENST00000463753 HSP90AA2PQ14568 343 aaPredicted RBP4.92□□□□□ -1.62
COL8A1-205ENST00000463753 POTEAQ6S8J7 498 aa4.92□□□□□ -1.62
COL8A1-205ENST00000463753 GPHNQ9NQX3 736 aaPredicted RBP4.92□□□□□ -1.62
COL8A1-205ENST00000463753 ADGRB3O60242 1522 aa4.92□□□□□ -1.62
COL8A1-205ENST00000463753 RGS12O14924 1447 aa4.92□□□□□ -1.62
COL8A1-205ENST00000463753 ATRNO75882 1429 aa4.92□□□□□ -1.62
COL8A1-205ENST00000463753 HSPA2P54652 639 aa4.92□□□□□ -1.62
COL8A1-205ENST00000463753 KIAA1107Q9UPP5 1409 aa4.91□□□□□ -1.62
COL8A1-205ENST00000463753 CAMK2BQ13554 666 aa4.91□□□□□ -1.62
COL8A1-205ENST00000463753 TNS1Q9HBL0 1735 aaKnown RBP4.91□□□□□ -1.62
COL8A1-205ENST00000463753 CARMIL1Q5VZK9 1371 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms