RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SLC24A3Q9HC58 644 aa7.13□□□□□ -1.27
SCFD1-204ENST00000463622 GIGYF2Q6Y7W6 1299 aaKnown RBP7.12□□□□□ -1.27
SCFD1-204ENST00000463622 SYMPKQ92797 1274 aaKnown RBP7.12□□□□□ -1.27
SCFD1-204ENST00000463622 ERCC6Q03468 1493 aa7.12□□□□□ -1.27
SCFD1-204ENST00000463622 HOXA2O43364 376 aa7.11□□□□□ -1.27
SCFD1-204ENST00000463622 AMHR2Q16671 573 aa7.11□□□□□ -1.27
SCFD1-204ENST00000463622 NUTM1Q86Y26 1132 aa7.11□□□□□ -1.27
SCFD1-204ENST00000463622 AK7Q96M32 723 aa7.11□□□□□ -1.27
SCFD1-204ENST00000463622 Q6ZNB5 142 aa7.1□□□□□ -1.27
SCFD1-204ENST00000463622 PARP9Q8IXQ6 854 aa7.1□□□□□ -1.27
SCFD1-204ENST00000463622 FCF1Q9Y324 198 aaKnown RBP7.1□□□□□ -1.27
SCFD1-204ENST00000463622 SALL2Q9Y467 1007 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-204ENST00000463622 NDUFV2P19404 249 aa7.09□□□□□ -1.27
SCFD1-204ENST00000463622 SPRYD7Q5W111 196 aa7.09□□□□□ -1.27
SCFD1-204ENST00000463622 SPIRE2Q8WWL2 714 aa7.09□□□□□ -1.27
SCFD1-204ENST00000463622 BCANQ96GW7 911 aa7.09□□□□□ -1.27
SCFD1-204ENST00000463622 USP46P62068 366 aa7.08□□□□□ -1.28
SCFD1-204ENST00000463622 BEGAINQ9BUH8 593 aa7.08□□□□□ -1.28
SCFD1-204ENST00000463622 PDZRN3Q9UPQ7 1066 aa7.08□□□□□ -1.28
SCFD1-204ENST00000463622 MS4A1P11836 297 aa7.07□□□□□ -1.28
SCFD1-204ENST00000463622 Q3C1V9 767 aa7.07□□□□□ -1.28
SCFD1-204ENST00000463622 TRIM67Q6ZTA4 783 aa7.07□□□□□ -1.28
SCFD1-204ENST00000463622 PCDHGC3Q9UN70 934 aa7.07□□□□□ -1.28
SCFD1-204ENST00000463622 USB1Q9BQ65 265 aaKnown RBP7.07□□□□□ -1.28
SCFD1-204ENST00000463622 MOXD2PA6NHM9 499 aa7.06□□□□□ -1.28
SCFD1-204ENST00000463622 PDE4DQ08499 809 aa7.06□□□□□ -1.28
SCFD1-204ENST00000463622 ZNF697Q5TEC3 545 aa7.06□□□□□ -1.28
SCFD1-204ENST00000463622 ZNF598Q86UK7 904 aaKnown RBP7.06□□□□□ -1.28
SCFD1-204ENST00000463622 TNFRSF10AO00220 468 aa7.05□□□□□ -1.28
SCFD1-204ENST00000463622 FDX1P10109 184 aa7.05□□□□□ -1.28
SCFD1-204ENST00000463622 MSS51Q4VC12 460 aa7.05□□□□□ -1.28
SCFD1-204ENST00000463622 ATAD2BQ9ULI0 1458 aa7.05□□□□□ -1.28
SCFD1-204ENST00000463622 LCE2BO14633 110 aa7.05□□□□□ -1.28
SCFD1-204ENST00000463622 C6orf229H3BNL8 230 aa7.03□□□□□ -1.28
SCFD1-204ENST00000463622 NRG2O14511 850 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-204ENST00000463622 FOXC1Q12948 553 aa7.03□□□□□ -1.28
SCFD1-204ENST00000463622 CCDC24Q8N4L8 307 aa7.03□□□□□ -1.28
SCFD1-204ENST00000463622 TBC1D2Q9BYX2 928 aa7.03□□□□□ -1.28
SCFD1-204ENST00000463622 NESP48681 1621 aa7.02□□□□□ -1.29
SCFD1-204ENST00000463622 MMP16P51512 607 aa7.02□□□□□ -1.29
SCFD1-204ENST00000463622 LAPTM4AQ15012 233 aa7.02□□□□□ -1.29
SCFD1-204ENST00000463622 DXOO77932 396 aaKnown RBP7.01□□□□□ -1.29
SCFD1-204ENST00000463622 PCDHB15Q9Y5E8 787 aa7.01□□□□□ -1.29
SCFD1-204ENST00000463622 GDF9O60383 454 aa7.01□□□□□ -1.29
SCFD1-204ENST00000463622 ZBTB24O43167 697 aaPredicted RBP7□□□□□ -1.29
SCFD1-204ENST00000463622 TRAF7Q6Q0C0 670 aa7□□□□□ -1.29
SCFD1-204ENST00000463622 RETREG3Q86VR2 466 aa7□□□□□ -1.29
SCFD1-204ENST00000463622 CD2BP2O95400 341 aaKnown RBP6.99□□□□□ -1.29
SCFD1-204ENST00000463622 RPIAP49247 311 aa6.99□□□□□ -1.29
SCFD1-204ENST00000463622 CSPP1Q1MSJ5 1256 aa6.99□□□□□ -1.29
SCFD1-204ENST00000463622 PKD2L1Q9P0L9 805 aa6.99□□□□□ -1.29
SCFD1-204ENST00000463622 JUNDP17535 347 aa6.99□□□□□ -1.29
SCFD1-204ENST00000463622 RSBN1LQ6PCB5 846 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-204ENST00000463622 GPBP1L1Q9HC44 474 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-204ENST00000463622 PRR7Q8TB68 274 aa6.97□□□□□ -1.29
SCFD1-204ENST00000463622 HMGXB3Q12766 1538 aa6.97□□□□□ -1.29
SCFD1-204ENST00000463622 PRR20EP86478 221 aa6.97□□□□□ -1.29
SCFD1-204ENST00000463622 PRR20CP86479 221 aa6.97□□□□□ -1.29
SCFD1-204ENST00000463622 PRR20DP86480 221 aa6.97□□□□□ -1.29
SCFD1-204ENST00000463622 PRR20BP86481 221 aa6.97□□□□□ -1.29
SCFD1-204ENST00000463622 PRR20AP86496 221 aa6.97□□□□□ -1.29
SCFD1-204ENST00000463622 TRIM32Q13049 653 aa6.97□□□□□ -1.29
SCFD1-204ENST00000463622 MTMR2Q13614 643 aa6.97□□□□□ -1.29
SCFD1-204ENST00000463622 PTCRAQ6ISU1 281 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-204ENST00000463622 RIC3Q7Z5B4 369 aa6.97□□□□□ -1.29
SCFD1-204ENST00000463622 CABLES1Q8TDN4 633 aa6.97□□□□□ -1.29
SCFD1-204ENST00000463622 FAM187AA6NFU0 413 aa6.96□□□□□ -1.3
SCFD1-204ENST00000463622 NUDT12Q9BQG2 462 aa6.96□□□□□ -1.3
SCFD1-204ENST00000463622 LIMD1Q9UGP4 676 aa6.96□□□□□ -1.3
SCFD1-204ENST00000463622 SMARCA2P51531 1590 aa6.96□□□□□ -1.3
SCFD1-204ENST00000463622 PKDCCQ504Y2 493 aa6.95□□□□□ -1.3
SCFD1-204ENST00000463622 MYSM1Q5VVJ2 828 aa6.95□□□□□ -1.3
SCFD1-204ENST00000463622 SPTLC1O15269 473 aa6.95□□□□□ -1.3
SCFD1-204ENST00000463622 HRCP23327 699 aa6.95□□□□□ -1.3
SCFD1-204ENST00000463622 DIXDC1Q155Q3 683 aa6.94□□□□□ -1.3
SCFD1-204ENST00000463622 POLR3EQ9NVU0 708 aa6.94□□□□□ -1.3
SCFD1-204ENST00000463622 PDS5BQ9NTI5 1447 aa6.94□□□□□ -1.3
SCFD1-204ENST00000463622 THOC2Q8NI27 1593 aaKnown RBP6.94□□□□□ -1.3
SCFD1-204ENST00000463622 CFAP99D6REC4 459 aa6.93□□□□□ -1.3
SCFD1-204ENST00000463622 SKOR1P84550 965 aa6.93□□□□□ -1.3
SCFD1-204ENST00000463622 QPCTQ16769 361 aa6.93□□□□□ -1.3
SCFD1-204ENST00000463622 MYT1Q01538 1121 aa6.92□□□□□ -1.3
SCFD1-204ENST00000463622 CYP4X1Q8N118 509 aa6.92□□□□□ -1.3
SCFD1-204ENST00000463622 TSC1Q92574 1164 aa6.92□□□□□ -1.3
SCFD1-204ENST00000463622 KDM4CQ9H3R0 1056 aa6.92□□□□□ -1.3
SCFD1-204ENST00000463622 CCNYL3P0C7X3 344 aa6.91□□□□□ -1.3
SCFD1-204ENST00000463622 MRGPRX2Q96LB1 330 aa6.91□□□□□ -1.3
SCFD1-204ENST00000463622 FAM117AQ9C073 453 aa6.91□□□□□ -1.3
SCFD1-204ENST00000463622 ZBTB3Q9H5J0 574 aa6.91□□□□□ -1.3
SCFD1-204ENST00000463622 TOR4AQ9NXH8 423 aa6.91□□□□□ -1.3
SCFD1-204ENST00000463622 LAMC3Q9Y6N6 1575 aa6.91□□□□□ -1.3
SCFD1-204ENST00000463622 BAZ1BQ9UIG0 1483 aaKnown RBP6.91□□□□□ -1.3
SCFD1-204ENST00000463622 TTC24A2A3L6 582 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-204ENST00000463622 SPDYE5A6NIY4 337 aa6.91□□□□□ -1.3
SCFD1-204ENST00000463622 NUTM2BA6NNL0 878 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-204ENST00000463622 NUTM2EB1AL46 878 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-204ENST00000463622 ST8SIA5O15466 376 aa6.91□□□□□ -1.3
SCFD1-204ENST00000463622 DGAT1O75907 488 aa6.91□□□□□ -1.3
SCFD1-204ENST00000463622 GJA5P36382 358 aa6.91□□□□□ -1.3
SCFD1-204ENST00000463622 RC3H1Q5TC82 1133 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms