RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 PROX2Q3B8N5 592 aa6.54□□□□□ -1.36
GPNMB-205ENST00000463011 RSPH4AQ5TD94 716 aa6.54□□□□□ -1.36
GPNMB-205ENST00000463011 TSC1Q92574 1164 aa6.54□□□□□ -1.36
GPNMB-205ENST00000463011 HLA-CQ95604 372 aa6.54□□□□□ -1.36
GPNMB-205ENST00000463011 TRIM34Q9BYJ4 488 aa6.54□□□□□ -1.36
GPNMB-205ENST00000463011 PSDA5PKW4 1024 aaPredicted RBP6.53□□□□□ -1.36
GPNMB-205ENST00000463011 CFAP70Q5T0N1 1121 aa6.53□□□□□ -1.36
GPNMB-205ENST00000463011 LRRN4Q8WUT4 740 aa6.53□□□□□ -1.36
GPNMB-205ENST00000463011 CARNS1A5YM72 827 aa6.52□□□□□ -1.37
GPNMB-205ENST00000463011 SLC10A3P09131 477 aa6.52□□□□□ -1.37
GPNMB-205ENST00000463011 CSB-PGBD3P0DP91 1061 aa6.52□□□□□ -1.37
GPNMB-205ENST00000463011 PPP1R12CQ9BZL4 782 aa6.52□□□□□ -1.37
GPNMB-205ENST00000463011 GPR37L1O60883 481 aa6.51□□□□□ -1.37
GPNMB-205ENST00000463011 SRPK2P78362 688 aaKnown RBP6.51□□□□□ -1.37
GPNMB-205ENST00000463011 MTMR2Q13614 643 aa6.51□□□□□ -1.37
GPNMB-205ENST00000463011 FOXD4L5Q5VV16 416 aaPredicted RBP6.51□□□□□ -1.37
GPNMB-205ENST00000463011 HELBQ8NG08 1087 aaPredicted RBP6.51□□□□□ -1.37
GPNMB-205ENST00000463011 FOXD4L4Q8WXT5 416 aaPredicted RBP6.51□□□□□ -1.37
GPNMB-205ENST00000463011 KIAA1468Q9P260 1216 aa6.51□□□□□ -1.37
GPNMB-205ENST00000463011 LMOD1P29536 600 aaPredicted RBP6.5□□□□□ -1.37
GPNMB-205ENST00000463011 CDCA8Q53HL2 280 aa6.5□□□□□ -1.37
GPNMB-205ENST00000463011 SWT1Q5T5J6 900 aaKnown RBP6.5□□□□□ -1.37
GPNMB-205ENST00000463011 EPS8L1Q8TE68 723 aa6.5□□□□□ -1.37
GPNMB-205ENST00000463011 KCNK17Q96T54 332 aa6.5□□□□□ -1.37
GPNMB-205ENST00000463011 ALG2Q9H553 416 aa6.5□□□□□ -1.37
GPNMB-205ENST00000463011 PALM3A6NDB9 673 aaPredicted RBP6.49□□□□□ -1.37
GPNMB-205ENST00000463011 CFAP99D6REC4 459 aa6.49□□□□□ -1.37
GPNMB-205ENST00000463011 C6orf229H3BNL8 230 aa6.49□□□□□ -1.37
GPNMB-205ENST00000463011 BRD1O95696 1058 aa6.49□□□□□ -1.37
GPNMB-205ENST00000463011 TFIP11Q9UBB9 837 aaKnown RBP6.49□□□□□ -1.37
GPNMB-205ENST00000463011 USTQ9Y2C2 406 aa6.49□□□□□ -1.37
GPNMB-205ENST00000463011 PATL2C9JE40 543 aaKnown RBP6.48□□□□□ -1.37
GPNMB-205ENST00000463011 KCNA1Q09470 495 aa6.48□□□□□ -1.37
GPNMB-205ENST00000463011 PRR7Q8TB68 274 aa6.47□□□□□ -1.37
GPNMB-205ENST00000463011 SYMPKQ92797 1274 aaKnown RBP6.47□□□□□ -1.37
GPNMB-205ENST00000463011 RBM25P49756 843 aaKnown RBP6.46□□□□□ -1.38
GPNMB-205ENST00000463011 HDGFP51858 240 aaKnown RBP6.46□□□□□ -1.38
GPNMB-205ENST00000463011 FUT2Q10981 343 aa6.46□□□□□ -1.38
GPNMB-205ENST00000463011 NR6A1Q15406 480 aa6.46□□□□□ -1.38
GPNMB-205ENST00000463011 MARVELD3Q96A59 401 aa6.46□□□□□ -1.38
GPNMB-205ENST00000463011 ZNF428Q96B54 188 aa6.46□□□□□ -1.38
GPNMB-205ENST00000463011 UCN2Q96RP3 112 aa6.46□□□□□ -1.38
GPNMB-205ENST00000463011 SEPT9Q9UHD8 586 aaPredicted RBP6.46□□□□□ -1.38
GPNMB-205ENST00000463011 SEMA3FQ13275 785 aa6.45□□□□□ -1.38
GPNMB-205ENST00000463011 GRIPAP1Q4V328 841 aa6.45□□□□□ -1.38
GPNMB-205ENST00000463011 SLF2Q8IX21 1173 aa6.45□□□□□ -1.38
GPNMB-205ENST00000463011 KCNH8Q96L42 1107 aa6.45□□□□□ -1.38
GPNMB-205ENST00000463011 ZBED2Q9BTP6 218 aa6.45□□□□□ -1.38
GPNMB-205ENST00000463011 PER1O15534 1290 aaPredicted RBP6.44□□□□□ -1.38
GPNMB-205ENST00000463011 HOXB1P14653 301 aaPredicted RBP6.44□□□□□ -1.38
GPNMB-205ENST00000463011 SOX11P35716 441 aa6.44□□□□□ -1.38
GPNMB-205ENST00000463011 PSEN2P49810 448 aa6.44□□□□□ -1.38
GPNMB-205ENST00000463011 VRTNQ9H8Y1 702 aa6.44□□□□□ -1.38
GPNMB-205ENST00000463011 IVNS1ABPQ9Y6Y0 642 aa6.44□□□□□ -1.38
GPNMB-205ENST00000463011 ATG7O95352 703 aa6.43□□□□□ -1.38
GPNMB-205ENST00000463011 ATP6V1AP38606 617 aa6.43□□□□□ -1.38
GPNMB-205ENST00000463011 SLC4A3P48751 1232 aa6.43□□□□□ -1.38
GPNMB-205ENST00000463011 TBC1D9Q6ZT07 1266 aa6.43□□□□□ -1.38
GPNMB-205ENST00000463011 KRTAP3-3Q9BYR6 98 aa6.43□□□□□ -1.38
GPNMB-205ENST00000463011 KRTAP3-2Q9BYR7 98 aa6.43□□□□□ -1.38
GPNMB-205ENST00000463011 MAFBQ9Y5Q3 323 aaPredicted RBP6.43□□□□□ -1.38
GPNMB-205ENST00000463011 CFHP08603 1231 aa6.42□□□□□ -1.38
GPNMB-205ENST00000463011 PNMA1Q8ND90 353 aa6.42□□□□□ -1.38
GPNMB-205ENST00000463011 RABGEF1Q9UJ41 708 aa6.42□□□□□ -1.38
GPNMB-205ENST00000463011 TMEM88BA6NKF7 163 aa6.41□□□□□ -1.38
GPNMB-205ENST00000463011 EIF4G2P78344 907 aaKnown RBP eCLIP6.41□□□□□ -1.38
GPNMB-205ENST00000463011 RNF40O75150 1001 aa6.4□□□□□ -1.38
GPNMB-205ENST00000463011 SAMD7Q7Z3H4 446 aa6.4□□□□□ -1.38
GPNMB-205ENST00000463011 SNPHO15079 494 aa6.39□□□□□ -1.39
GPNMB-205ENST00000463011 ATP9BO43861 1147 aa6.39□□□□□ -1.39
GPNMB-205ENST00000463011 FAM98CQ17RN3 349 aaKnown RBP6.39□□□□□ -1.39
GPNMB-205ENST00000463011 CCDC27Q2M243 656 aa6.39□□□□□ -1.39
GPNMB-205ENST00000463011 RETREG3Q86VR2 466 aa6.39□□□□□ -1.39
GPNMB-205ENST00000463011 PUS10Q3MIT2 529 aaKnown RBP6.38□□□□□ -1.39
GPNMB-205ENST00000463011 PIK3CDO00329 1044 aa6.37□□□□□ -1.39
GPNMB-205ENST00000463011 ARHGAP33O14559 1287 aa6.37□□□□□ -1.39
GPNMB-205ENST00000463011 NR1H3Q13133 447 aa6.37□□□□□ -1.39
GPNMB-205ENST00000463011 KMT5BQ4FZB7 885 aa6.37□□□□□ -1.39
GPNMB-205ENST00000463011 MORN1Q5T089 497 aa6.37□□□□□ -1.39
GPNMB-205ENST00000463011 KANK4Q5T7N3 995 aaPredicted RBP6.37□□□□□ -1.39
GPNMB-205ENST00000463011 DMRTA1Q5VZB9 504 aa6.37□□□□□ -1.39
GPNMB-205ENST00000463011 LYPD8Q6UX82 237 aa6.37□□□□□ -1.39
GPNMB-205ENST00000463011 SND1Q7KZF4 910 aaKnown RBP eCLIP6.37□□□□□ -1.39
GPNMB-205ENST00000463011 SLC27A5Q9Y2P5 690 aa6.37□□□□□ -1.39
GPNMB-205ENST00000463011 AXIN2Q9Y2T1 843 aa6.37□□□□□ -1.39
GPNMB-205ENST00000463011 E9PSI1 815 aa6.36□□□□□ -1.39
GPNMB-205ENST00000463011 FBXO45P0C2W1 286 aa6.36□□□□□ -1.39
GPNMB-205ENST00000463011 POTEEQ6S8J3 1075 aa6.36□□□□□ -1.39
GPNMB-205ENST00000463011 SLC4A5Q9BY07 1137 aa6.36□□□□□ -1.39
GPNMB-205ENST00000463011 ZBBXA8MT70 800 aa6.35□□□□□ -1.39
GPNMB-205ENST00000463011 SKIP12755 728 aa6.35□□□□□ -1.39
GPNMB-205ENST00000463011 Q3C1V9 767 aa6.35□□□□□ -1.39
GPNMB-205ENST00000463011 DESI1Q6ICB0 168 aa6.35□□□□□ -1.39
GPNMB-205ENST00000463011 TMEM164Q5U3C3 297 aa6.34□□□□□ -1.39
GPNMB-205ENST00000463011 RNF19BQ6ZMZ0 732 aa6.34□□□□□ -1.39
GPNMB-205ENST00000463011 STK32AQ8WU08 396 aa6.34□□□□□ -1.39
GPNMB-205ENST00000463011 ZMIZ1Q9ULJ6 1067 aa6.34□□□□□ -1.39
GPNMB-205ENST00000463011 VPS9D1Q9Y2B5 631 aa6.34□□□□□ -1.39
GPNMB-205ENST00000463011 USP17L3A6NCW0 530 aa6.33□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L4A6NCW7 530 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms