RNA–Protein interactions for RNA: ENST00000462392.5

IMP4-210, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 1,793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-210ENST00000462392 CABP2Q9NPB3 220 aa27.93■■■□□ 2.06
IMP4-210ENST00000462392 TMC1Q8TDI8 760 aa27.92■■■□□ 2.06
IMP4-210ENST00000462392 TECPR2O15040 1411 aa27.92■■■□□ 2.06
IMP4-210ENST00000462392 ZNF142P52746 1687 aaPredicted RBP27.92■■■□□ 2.06
IMP4-210ENST00000462392 SLC26A8Q96RN1 970 aa27.91■■■□□ 2.06
IMP4-210ENST00000462392 AMER1Q5JTC6 1135 aaPredicted RBP27.91■■■□□ 2.06
IMP4-210ENST00000462392 SLC12A5Q9H2X9 1139 aa27.91■■■□□ 2.06
IMP4-210ENST00000462392 KNDC1Q76NI1 1749 aa27.91■■■□□ 2.06
IMP4-210ENST00000462392 SETD1BQ9UPS6 1966 aaKnown RBP27.9■■■□□ 2.06
IMP4-210ENST00000462392 SRPK2P78362 688 aaKnown RBP27.89■■■□□ 2.06
IMP4-210ENST00000462392 SIRT1Q96EB6 747 aa27.88■■■□□ 2.05
IMP4-210ENST00000462392 FAM135BQ49AJ0 1406 aa27.88■■■□□ 2.05
IMP4-210ENST00000462392 CPS1P31327 1500 aa27.88■■■□□ 2.05
IMP4-210ENST00000462392 CARD14Q9BXL6 1004 aa27.88■■■□□ 2.05
IMP4-210ENST00000462392 TBX22Q9Y458 520 aa27.87■■■□□ 2.05
IMP4-210ENST00000462392 FAM9BQ8IZU0 186 aa27.85■■■□□ 2.05
IMP4-210ENST00000462392 NPC1L1Q9UHC9 1359 aa27.85■■■□□ 2.05
IMP4-210ENST00000462392 BRD4O60885 1362 aaPredicted RBP27.84■■■□□ 2.05
IMP4-210ENST00000462392 CDK19Q9BWU1 502 aa27.84■■■□□ 2.05
IMP4-210ENST00000462392 ATAD2Q6PL18 1390 aa27.84■■■□□ 2.05
IMP4-210ENST00000462392 NLRP13Q86W25 1043 aa27.83■■■□□ 2.05
IMP4-210ENST00000462392 DIP2AQ14689 1571 aa27.82■■■□□ 2.04
IMP4-210ENST00000462392 PTPRUQ92729 1446 aa27.82■■■□□ 2.04
IMP4-210ENST00000462392 ROBO2Q9HCK4 1378 aa27.82■■■□□ 2.04
IMP4-210ENST00000462392 ANKLE2Q86XL3 938 aa27.82■■■□□ 2.04
IMP4-210ENST00000462392 NINLQ9Y2I6 1382 aa27.81■■■□□ 2.04
IMP4-210ENST00000462392 ANKRD36BQ8N2N9 1353 aa27.8■■■□□ 2.04
IMP4-210ENST00000462392 NSD3Q9BZ95 1437 aa27.79■■■□□ 2.04
IMP4-210ENST00000462392 AMOTL2Q9Y2J4 779 aa27.77■■■□□ 2.04
IMP4-210ENST00000462392 PNISRQ8TF01 805 aaKnown RBP27.76■■■□□ 2.03
IMP4-210ENST00000462392 WASLO00401 505 aaPredicted RBP27.76■■■□□ 2.03
IMP4-210ENST00000462392 HNRNPUQ00839 825 aaKnown RBP eCLIP27.75■■■□□ 2.03
IMP4-210ENST00000462392 A0A1W2PP64 1363 aa27.72■■■□□ 2.03
IMP4-210ENST00000462392 PPP2R1AP30153 589 aa27.71■■■□□ 2.03
IMP4-210ENST00000462392 PTCH1Q13635 1447 aa27.71■■■□□ 2.03
IMP4-210ENST00000462392 PIK3R4Q99570 1358 aa27.7■■■□□ 2.03
IMP4-210ENST00000462392 USP32Q8NFA0 1604 aa27.7■■■□□ 2.02
IMP4-210ENST00000462392 TERF2IPQ9NYB0 399 aa27.7■■■□□ 2.02
IMP4-210ENST00000462392 CABP1Q9NZU7 370 aa27.7■■■□□ 2.02
IMP4-210ENST00000462392 CD163L1Q9NR16 1453 aa27.69■■■□□ 2.02
IMP4-210ENST00000462392 CGNL1Q0VF96 1302 aa27.68■■■□□ 2.02
IMP4-210ENST00000462392 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.68■■■□□ 2.02
IMP4-210ENST00000462392 XRN1Q8IZH2 1706 aaKnown RBP27.67■■■□□ 2.02
IMP4-210ENST00000462392 ADGRB2O60241 1585 aa27.67■■■□□ 2.02
IMP4-210ENST00000462392 HDGFL2Q7Z4V5 671 aaPredicted RBP27.65■■■□□ 2.02
IMP4-210ENST00000462392 NPHP4O75161 1426 aaPredicted RBP27.64■■■□□ 2.01
IMP4-210ENST00000462392 KCNA6P17658 529 aa27.63■■■□□ 2.01
IMP4-210ENST00000462392 NUDT16Q96DE0 195 aaKnown RBP27.63■■■□□ 2.01
IMP4-210ENST00000462392 MORC1Q86VD1 984 aa27.62■■■□□ 2.01
IMP4-210ENST00000462392 ATP7BP35670 1465 aa27.62■■■□□ 2.01
IMP4-210ENST00000462392 PPIP5K1Q6PFW1 1433 aa27.62■■■□□ 2.01
IMP4-210ENST00000462392 NSD2O96028 1365 aa27.61■■■□□ 2.01
IMP4-210ENST00000462392 CCDC61Q9Y6R9 512 aa27.6■■■□□ 2.01
IMP4-210ENST00000462392 NCKAP5LQ9HCH0 1330 aa27.6■■■□□ 2.01
IMP4-210ENST00000462392 PRR36Q9H6K5 1346 aa27.59■■■□□ 2.01
IMP4-210ENST00000462392 KDM4FA0A1W2PPD8 638 aa27.58■■■□□ 2.01
IMP4-210ENST00000462392 CHD2O14647 1828 aaKnown RBP27.57■■■□□ 2
IMP4-210ENST00000462392 CPSF1Q10570 1443 aaKnown RBP27.55■■■□□ 2
IMP4-210ENST00000462392 ZBED9Q6R2W3 1325 aa27.54■■■□□ 2
IMP4-210ENST00000462392 TNNT2P45379 298 aaPredicted RBP27.53■■■□□ 2
IMP4-210ENST00000462392 FYB1O15117 783 aa27.53■■■□□ 2
IMP4-210ENST00000462392 SCAF1Q9H7N4 1312 aaKnown RBP27.52■■■□□ 2
IMP4-210ENST00000462392 CDC42BPGQ6DT37 1551 aa27.52■■■□□ 2
IMP4-210ENST00000462392 NUTM2FA1L443 756 aa27.52■■■□□ 2
IMP4-210ENST00000462392 GGNBP2Q9H3C7 697 aa27.52■■■□□ 2
IMP4-210ENST00000462392 GTF3C3Q9Y5Q9 886 aa27.51■■□□□ 1.99
IMP4-210ENST00000462392 TOPAZ1Q8N9V7 1692 aa27.48■■□□□ 1.99
IMP4-210ENST00000462392 INSRP06213 1382 aa27.48■■□□□ 1.99
IMP4-210ENST00000462392 EDC4Q6P2E9 1401 aaKnown RBP27.48■■□□□ 1.99
IMP4-210ENST00000462392 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.48■■□□□ 1.99
IMP4-210ENST00000462392 WDR43Q15061 677 aaKnown RBP eCLIP27.46■■□□□ 1.99
IMP4-210ENST00000462392 POLR3AO14802 1390 aaPredicted RBP27.46■■□□□ 1.99
IMP4-210ENST00000462392 PLEKHG3A1L390 1219 aa27.45■■□□□ 1.99
IMP4-210ENST00000462392 ADAMTS8Q9UP79 889 aa27.45■■□□□ 1.99
IMP4-210ENST00000462392 ZNF692Q9BU19 519 aaPredicted RBP27.45■■□□□ 1.98
IMP4-210ENST00000462392 ANKRD26Q9UPS8 1709 aa27.44■■□□□ 1.98
IMP4-210ENST00000462392 KIF20BQ96Q89 1820 aa27.44■■□□□ 1.98
IMP4-210ENST00000462392 HSPA2P54652 639 aa27.44■■□□□ 1.98
IMP4-210ENST00000462392 BLMP54132 1417 aaPredicted RBP27.44■■□□□ 1.98
IMP4-210ENST00000462392 AKAP12Q02952 1782 aa27.43■■□□□ 1.98
IMP4-210ENST00000462392 ITSN1Q15811 1721 aa27.43■■□□□ 1.98
IMP4-210ENST00000462392 MON2Q7Z3U7 1717 aa27.43■■□□□ 1.98
IMP4-210ENST00000462392 SENP3-EIF4A1A0A087X0R7 540 aa27.43■■□□□ 1.98
IMP4-210ENST00000462392 MTHFSP49914 203 aa27.43■■□□□ 1.98
IMP4-210ENST00000462392 ACEP12821 1306 aa27.42■■□□□ 1.98
IMP4-210ENST00000462392 NKTRP30414 1462 aaKnown RBP27.42■■□□□ 1.98
IMP4-210ENST00000462392 RBM33Q96EV2 1170 aaKnown RBP27.42■■□□□ 1.98
IMP4-210ENST00000462392 NWD1Q149M9 1564 aa27.41■■□□□ 1.98
IMP4-210ENST00000462392 NALCNQ8IZF0 1738 aa27.4■■□□□ 1.98
IMP4-210ENST00000462392 ANKARQ7Z5J8 1434 aa27.39■■□□□ 1.98
IMP4-210ENST00000462392 LMTK3Q96Q04 1460 aa27.38■■□□□ 1.97
IMP4-210ENST00000462392 NME9Q86XW9 330 aa27.37■■□□□ 1.97
IMP4-210ENST00000462392 FMN2Q9NZ56 1722 aa27.37■■□□□ 1.97
IMP4-210ENST00000462392 ADGRL3Q9HAR2 1447 aa27.37■■□□□ 1.97
IMP4-210ENST00000462392 PMFBP1Q8TBY8 1022 aa27.36■■□□□ 1.97
IMP4-210ENST00000462392 CFAP53Q96M91 514 aa27.35■■□□□ 1.97
IMP4-210ENST00000462392 USP6P35125 1406 aa27.35■■□□□ 1.97
IMP4-210ENST00000462392 RGPD8O14715 1765 aaPredicted RBP27.35■■□□□ 1.97
IMP4-210ENST00000462392 NRKQ7Z2Y5 1582 aa27.32■■□□□ 1.96
IMP4-210ENST00000462392 TTC21BQ7Z4L5 1316 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms