RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 UQCRHP07919 91 aa10.09□□□□□ -0.79
ERCC8-204ENST00000462279 SSFA2P28290 1259 aa10.09□□□□□ -0.79
ERCC8-204ENST00000462279 ITPRIPQ8IWB1 547 aa10.09□□□□□ -0.79
ERCC8-204ENST00000462279 A2MP01023 1474 aa10.09□□□□□ -0.79
ERCC8-204ENST00000462279 GPRASP1Q5JY77 1395 aa10.09□□□□□ -0.79
ERCC8-204ENST00000462279 NINLQ9Y2I6 1382 aa10.09□□□□□ -0.79
ERCC8-204ENST00000462279 MYOM1P52179 1685 aa10.08□□□□□ -0.8
ERCC8-204ENST00000462279 CDCA8Q53HL2 280 aa10.08□□□□□ -0.8
ERCC8-204ENST00000462279 ILDR1Q86SU0 546 aaPredicted RBP10.08□□□□□ -0.8
ERCC8-204ENST00000462279 WDR7Q9Y4E6 1490 aa10.08□□□□□ -0.8
ERCC8-204ENST00000462279 TCP11L2Q8N4U5 519 aa10.08□□□□□ -0.8
ERCC8-204ENST00000462279 LNPKQ9C0E8 428 aa10.08□□□□□ -0.8
ERCC8-204ENST00000462279 MVPQ14764 893 aaKnown RBP10.07□□□□□ -0.8
ERCC8-204ENST00000462279 RAB3GAP1Q15042 981 aa10.07□□□□□ -0.8
ERCC8-204ENST00000462279 RBM42Q9BTD8 480 aaKnown RBP10.07□□□□□ -0.8
ERCC8-204ENST00000462279 IQGAP1P46940 1657 aa10.07□□□□□ -0.8
ERCC8-204ENST00000462279 CAVIN1Q6NZI2 390 aaKnown RBP10.07□□□□□ -0.8
ERCC8-204ENST00000462279 CD2BP2O95400 341 aaKnown RBP10.07□□□□□ -0.8
ERCC8-204ENST00000462279 DZIP1LQ8IYY4 767 aaKnown RBP10.07□□□□□ -0.8
ERCC8-204ENST00000462279 PRDM15P57071 1507 aaPredicted RBP10.06□□□□□ -0.8
ERCC8-204ENST00000462279 PREX2Q70Z35 1606 aa10.06□□□□□ -0.8
ERCC8-204ENST00000462279 PPP1R9BQ96SB3 815 aa10.06□□□□□ -0.8
ERCC8-204ENST00000462279 RTEL1-TNFRSF6BF6WH68 1400 aa10.06□□□□□ -0.8
ERCC8-204ENST00000462279 PIK3C2GO75747 1445 aa10.06□□□□□ -0.8
ERCC8-204ENST00000462279 ZKSCAN2Q63HK3 967 aa10.06□□□□□ -0.8
ERCC8-204ENST00000462279 MCTP1Q6DN14 999 aa10.06□□□□□ -0.8
ERCC8-204ENST00000462279 PLB1Q6P1J6 1458 aa10.06□□□□□ -0.8
ERCC8-204ENST00000462279 SMC5Q8IY18 1101 aa10.05□□□□□ -0.8
ERCC8-204ENST00000462279 SMC4Q9NTJ3 1288 aa10.05□□□□□ -0.8
ERCC8-204ENST00000462279 FBLN2P98095 1184 aa10.05□□□□□ -0.8
ERCC8-204ENST00000462279 ASXL1Q8IXJ9 1541 aa10.05□□□□□ -0.8
ERCC8-204ENST00000462279 FAM135AQ9P2D6 1515 aa10.05□□□□□ -0.8
ERCC8-204ENST00000462279 IQGAP3Q86VI3 1631 aa10.05□□□□□ -0.8
ERCC8-204ENST00000462279 AAMPQ13685 434 aa10.05□□□□□ -0.8
ERCC8-204ENST00000462279 TSR2Q969E8 191 aaKnown RBP10.05□□□□□ -0.8
ERCC8-204ENST00000462279 MAP7D2Q96T17 732 aa10.05□□□□□ -0.8
ERCC8-204ENST00000462279 CIZ1Q9ULV3 898 aaPredicted RBP10.05□□□□□ -0.8
ERCC8-204ENST00000462279 DDIT3P35638 169 aa10.04□□□□□ -0.8
ERCC8-204ENST00000462279 AK9Q5TCS8 1911 aa10.04□□□□□ -0.8
ERCC8-204ENST00000462279 GAS2L2Q8NHY3 880 aa10.04□□□□□ -0.8
ERCC8-204ENST00000462279 CLASP1Q7Z460 1538 aa10.03□□□□□ -0.8
ERCC8-204ENST00000462279 PLXNC1O60486 1568 aa10.03□□□□□ -0.8
ERCC8-204ENST00000462279 BAG4O95429 457 aaKnown RBP10.03□□□□□ -0.8
ERCC8-204ENST00000462279 PTMSP20962 102 aa10.03□□□□□ -0.8
ERCC8-204ENST00000462279 DNTTIP2Q5QJE6 756 aaKnown RBP10.03□□□□□ -0.8
ERCC8-204ENST00000462279 MPNDQ8N594 471 aa10.03□□□□□ -0.8
ERCC8-204ENST00000462279 NGEFQ8N5V2 710 aa10.03□□□□□ -0.8
ERCC8-204ENST00000462279 SNX21Q969T3 373 aa10.03□□□□□ -0.8
ERCC8-204ENST00000462279 RUNDC1Q96C34 613 aa10.03□□□□□ -0.8
ERCC8-204ENST00000462279 K7ELQ4 463 aaPredicted RBP10.03□□□□□ -0.8
ERCC8-204ENST00000462279 KLHL40Q2TBA0 621 aa10.03□□□□□ -0.8
ERCC8-204ENST00000462279 MORC1Q86VD1 984 aa10.03□□□□□ -0.8
ERCC8-204ENST00000462279 CARD14Q9BXL6 1004 aa10.03□□□□□ -0.8
ERCC8-204ENST00000462279 PLA2R1Q13018 1463 aa10.02□□□□□ -0.8
ERCC8-204ENST00000462279 RBM25P49756 843 aaKnown RBP10.02□□□□□ -0.81
ERCC8-204ENST00000462279 RBSNQ9H1K0 784 aa10.02□□□□□ -0.81
ERCC8-204ENST00000462279 RNF214Q8ND24 703 aa10.02□□□□□ -0.81
ERCC8-204ENST00000462279 ABCC2Q92887 1545 aa10.02□□□□□ -0.81
ERCC8-204ENST00000462279 ZMYM3Q14202 1370 aa10.01□□□□□ -0.81
ERCC8-204ENST00000462279 PTMAP06454 111 aaKnown RBP10.01□□□□□ -0.81
ERCC8-204ENST00000462279 TRIM27P14373 513 aa10.01□□□□□ -0.81
ERCC8-204ENST00000462279 SYNJ2O15056 1496 aa10.01□□□□□ -0.81
ERCC8-204ENST00000462279 PRIM1P49642 420 aaKnown RBP10.01□□□□□ -0.81
ERCC8-204ENST00000462279 ZSCAN23Q3MJ62 389 aa10.01□□□□□ -0.81
ERCC8-204ENST00000462279 FOXD4L5Q5VV16 416 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-204ENST00000462279 FOXD4L4Q8WXT5 416 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-204ENST00000462279 RBM27Q9P2N5 1060 aaKnown RBP10.01□□□□□ -0.81
ERCC8-204ENST00000462279 NOL7Q9UMY1 257 aaKnown RBP10.01□□□□□ -0.81
ERCC8-204ENST00000462279 SAMD9LQ8IVG5 1584 aa10.01□□□□□ -0.81
ERCC8-204ENST00000462279 IFT172Q9UG01 1749 aa10.01□□□□□ -0.81
ERCC8-204ENST00000462279 TSC1Q92574 1164 aa10.01□□□□□ -0.81
ERCC8-204ENST00000462279 JARID2Q92833 1246 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-204ENST00000462279 ERCC6Q03468 1493 aa10□□□□□ -0.81
ERCC8-204ENST00000462279 U2AF1L5P0DN76 240 aaPredicted RBP10□□□□□ -0.81
ERCC8-204ENST00000462279 U2AF1Q01081 240 aaKnown RBP eCLIP10□□□□□ -0.81
ERCC8-204ENST00000462279 ANKRD45Q5TZF3 282 aa10□□□□□ -0.81
ERCC8-204ENST00000462279 DDX19BQ9UMR2 479 aa10□□□□□ -0.81
ERCC8-204ENST00000462279 NCOA3Q9Y6Q9 1424 aa10□□□□□ -0.81
ERCC8-204ENST00000462279 PRPF40AO75400 957 aaKnown RBP10□□□□□ -0.81
ERCC8-204ENST00000462279 EXOSC9Q06265 439 aaKnown RBP10□□□□□ -0.81
ERCC8-204ENST00000462279 CEP152O94986 1710 aa10□□□□□ -0.81
ERCC8-204ENST00000462279 SPHKAPQ2M3C7 1700 aa10□□□□□ -0.81
ERCC8-204ENST00000462279 TERF1P54274 439 aa10□□□□□ -0.81
ERCC8-204ENST00000462279 SMAP1Q8IYB5 467 aaPredicted RBP9.99□□□□□ -0.81
ERCC8-204ENST00000462279 TMEM57Q8N5G2 664 aa9.99□□□□□ -0.81
ERCC8-204ENST00000462279 CHAMP1Q96JM3 812 aa9.99□□□□□ -0.81
ERCC8-204ENST00000462279 KIF2CQ99661 725 aa9.99□□□□□ -0.81
ERCC8-204ENST00000462279 MRC2Q9UBG0 1479 aa9.99□□□□□ -0.81
ERCC8-204ENST00000462279 HDAC1Q13547 482 aaPredicted RBP9.99□□□□□ -0.81
ERCC8-204ENST00000462279 PKP1Q13835 747 aa9.99□□□□□ -0.81
ERCC8-204ENST00000462279 WDR63Q8IWG1 891 aa9.99□□□□□ -0.81
ERCC8-204ENST00000462279 SSH1Q8WYL5 1049 aa9.99□□□□□ -0.81
ERCC8-204ENST00000462279 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.99□□□□□ -0.81
ERCC8-204ENST00000462279 NOB1Q9ULX3 412 aaKnown RBP9.99□□□□□ -0.81
ERCC8-204ENST00000462279 ZKSCAN5Q9Y2L8 839 aa9.99□□□□□ -0.81
ERCC8-204ENST00000462279 SHROOM2Q13796 1616 aa9.99□□□□□ -0.81
ERCC8-204ENST00000462279 GRIN2AQ12879 1464 aa9.99□□□□□ -0.81
ERCC8-204ENST00000462279 DYNC1I1O14576 645 aa9.98□□□□□ -0.81
ERCC8-204ENST00000462279 ZNF500O60304 480 aaPredicted RBP9.98□□□□□ -0.81
ERCC8-204ENST00000462279 MTHFSP49914 203 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms