RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 SETD1AO15047 1707 aaKnown RBP10.12□□□□□ -0.79
LSG1-205ENST00000461343 ASXL1Q8IXJ9 1541 aa10.12□□□□□ -0.79
LSG1-205ENST00000461343 NRXN3Q9Y4C0 1643 aa10.11□□□□□ -0.79
LSG1-205ENST00000461343 MED14O60244 1454 aa10.11□□□□□ -0.79
LSG1-205ENST00000461343 MYBBP1AQ9BQG0 1328 aaKnown RBP10.11□□□□□ -0.79
LSG1-205ENST00000461343 SRPK2P78362 688 aaKnown RBP10.11□□□□□ -0.79
LSG1-205ENST00000461343 PLPPR3Q6T4P5 718 aa10.11□□□□□ -0.79
LSG1-205ENST00000461343 PANK3Q9H999 370 aa10.11□□□□□ -0.79
LSG1-205ENST00000461343 BRD4O60885 1362 aaPredicted RBP10.11□□□□□ -0.79
LSG1-205ENST00000461343 CGNL1Q0VF96 1302 aa10.1□□□□□ -0.79
LSG1-205ENST00000461343 ADAMTS13Q76LX8 1427 aa10.1□□□□□ -0.79
LSG1-205ENST00000461343 HDGFL2Q7Z4V5 671 aaPredicted RBP10.1□□□□□ -0.79
LSG1-205ENST00000461343 NLRP13Q86W25 1043 aa10.1□□□□□ -0.79
LSG1-205ENST00000461343 ANKRD36BQ8N2N9 1353 aa10.1□□□□□ -0.79
LSG1-205ENST00000461343 LTKP29376 864 aa10.09□□□□□ -0.79
LSG1-205ENST00000461343 PARD3Q8TEW0 1356 aa10.09□□□□□ -0.79
LSG1-205ENST00000461343 USP32Q8NFA0 1604 aa10.08□□□□□ -0.8
LSG1-205ENST00000461343 TMC1Q8TDI8 760 aa10.08□□□□□ -0.8
LSG1-205ENST00000461343 INSRP06213 1382 aa10.08□□□□□ -0.8
LSG1-205ENST00000461343 METP08581 1390 aa10.08□□□□□ -0.8
LSG1-205ENST00000461343 ATP7BP35670 1465 aa10.08□□□□□ -0.8
LSG1-205ENST00000461343 ADGRB2O60241 1585 aa10.08□□□□□ -0.8
LSG1-205ENST00000461343 PER1O15534 1290 aaPredicted RBP10.07□□□□□ -0.8
LSG1-205ENST00000461343 MRS2Q9HD23 443 aa10.07□□□□□ -0.8
LSG1-205ENST00000461343 TULP4Q9NRJ4 1543 aa10.07□□□□□ -0.8
LSG1-205ENST00000461343 NPHP4O75161 1426 aaPredicted RBP10.07□□□□□ -0.8
LSG1-205ENST00000461343 MYOM1P52179 1685 aa10.06□□□□□ -0.8
LSG1-205ENST00000461343 WASLO00401 505 aaPredicted RBP10.06□□□□□ -0.8
LSG1-205ENST00000461343 ZNF692Q9BU19 519 aaPredicted RBP10.06□□□□□ -0.8
LSG1-205ENST00000461343 MINK1Q8N4C8 1332 aaPredicted RBP10.06□□□□□ -0.8
LSG1-205ENST00000461343 CDK19Q9BWU1 502 aa10.05□□□□□ -0.8
LSG1-205ENST00000461343 AMOTL2Q9Y2J4 779 aa10.05□□□□□ -0.8
LSG1-205ENST00000461343 CCDC61Q9Y6R9 512 aa10.04□□□□□ -0.8
LSG1-205ENST00000461343 ANKARQ7Z5J8 1434 aa10.04□□□□□ -0.8
LSG1-205ENST00000461343 SAFB2Q14151 953 aaKnown RBP eCLIP10.03□□□□□ -0.8
LSG1-205ENST00000461343 AMER1Q5JTC6 1135 aaPredicted RBP10.03□□□□□ -0.8
LSG1-205ENST00000461343 XRN1Q8IZH2 1706 aaKnown RBP10.03□□□□□ -0.8
LSG1-205ENST00000461343 SLC26A8Q96RN1 970 aa10.03□□□□□ -0.8
LSG1-205ENST00000461343 NKTRP30414 1462 aaKnown RBP10.03□□□□□ -0.8
LSG1-205ENST00000461343 NSD3Q9BZ95 1437 aa10.02□□□□□ -0.81
LSG1-205ENST00000461343 NCOA3Q9Y6Q9 1424 aa10.02□□□□□ -0.81
LSG1-205ENST00000461343 NGEFQ8N5V2 710 aa10.02□□□□□ -0.81
LSG1-205ENST00000461343 CFAP53Q96M91 514 aa10.02□□□□□ -0.81
LSG1-205ENST00000461343 CABP2Q9NPB3 220 aa10.02□□□□□ -0.81
LSG1-205ENST00000461343 ROBO2Q9HCK4 1378 aa10.01□□□□□ -0.81
LSG1-205ENST00000461343 KCNA6P17658 529 aa10.01□□□□□ -0.81
LSG1-205ENST00000461343 WAPLQ7Z5K2 1190 aa10.01□□□□□ -0.81
LSG1-205ENST00000461343 MORC1Q86VD1 984 aa10.01□□□□□ -0.81
LSG1-205ENST00000461343 YTHDC1Q96MU7 727 aaKnown RBP10.01□□□□□ -0.81
LSG1-205ENST00000461343 DMRT2Q9Y5R5 561 aa10.01□□□□□ -0.81
LSG1-205ENST00000461343 ITSN1Q15811 1721 aa10.01□□□□□ -0.81
LSG1-205ENST00000461343 EDC4Q6P2E9 1401 aaKnown RBP10□□□□□ -0.81
LSG1-205ENST00000461343 CC2D1BQ5T0F9 858 aaKnown RBP10□□□□□ -0.81
LSG1-205ENST00000461343 SLC12A5Q9H2X9 1139 aa10□□□□□ -0.81
LSG1-205ENST00000461343 CHD2O14647 1828 aaKnown RBP10□□□□□ -0.81
LSG1-205ENST00000461343 PPIP5K1Q6PFW1 1433 aa9.99□□□□□ -0.81
LSG1-205ENST00000461343 WDR43Q15061 677 aaKnown RBP eCLIP9.99□□□□□ -0.81
LSG1-205ENST00000461343 NUDT16Q96DE0 195 aaKnown RBP9.99□□□□□ -0.81
LSG1-205ENST00000461343 NWD1Q149M9 1564 aa9.99□□□□□ -0.81
LSG1-205ENST00000461343 CDC42BPGQ6DT37 1551 aa9.99□□□□□ -0.81
LSG1-205ENST00000461343 SCAF1Q9H7N4 1312 aaKnown RBP9.99□□□□□ -0.81
LSG1-205ENST00000461343 A0A1W2PP64 1363 aa9.99□□□□□ -0.81
LSG1-205ENST00000461343 PLEKHG3A1L390 1219 aa9.98□□□□□ -0.81
LSG1-205ENST00000461343 PNNQ9H307 717 aaKnown RBP9.98□□□□□ -0.81
LSG1-205ENST00000461343 PLEKHH1Q9ULM0 1364 aa9.98□□□□□ -0.81
LSG1-205ENST00000461343 PTPRUQ92729 1446 aa9.98□□□□□ -0.81
LSG1-205ENST00000461343 CABP1Q9NZU7 370 aa9.97□□□□□ -0.81
LSG1-205ENST00000461343 DCCP43146 1447 aa9.97□□□□□ -0.81
LSG1-205ENST00000461343 CPSF1Q10570 1443 aaKnown RBP9.97□□□□□ -0.81
LSG1-205ENST00000461343 ADGRL3Q9HAR2 1447 aa9.97□□□□□ -0.81
LSG1-205ENST00000461343 PPP2R1AP30153 589 aa9.96□□□□□ -0.82
LSG1-205ENST00000461343 HNRNPUQ00839 825 aaKnown RBP eCLIP9.96□□□□□ -0.82
LSG1-205ENST00000461343 FAM9BQ8IZU0 186 aa9.96□□□□□ -0.82
LSG1-205ENST00000461343 PNISRQ8TF01 805 aaKnown RBP9.96□□□□□ -0.82
LSG1-205ENST00000461343 CARD14Q9BXL6 1004 aa9.96□□□□□ -0.82
LSG1-205ENST00000461343 ZBED9Q6R2W3 1325 aa9.96□□□□□ -0.82
LSG1-205ENST00000461343 TTC21AQ8NDW8 1320 aa9.96□□□□□ -0.82
LSG1-205ENST00000461343 POLR3AO14802 1390 aaPredicted RBP9.96□□□□□ -0.82
LSG1-205ENST00000461343 C14orf37Q86TY3 774 aa9.95□□□□□ -0.82
LSG1-205ENST00000461343 NUDCQ9Y266 331 aa9.95□□□□□ -0.82
LSG1-205ENST00000461343 ANKRD26Q9UPS8 1709 aa9.95□□□□□ -0.82
LSG1-205ENST00000461343 TOPAZ1Q8N9V7 1692 aa9.94□□□□□ -0.82
LSG1-205ENST00000461343 NCKAP5LQ9HCH0 1330 aa9.94□□□□□ -0.82
LSG1-205ENST00000461343 KIF20BQ96Q89 1820 aa9.93□□□□□ -0.82
LSG1-205ENST00000461343 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.93□□□□□ -0.82
LSG1-205ENST00000461343 KDM4FA0A1W2PPD8 638 aa9.93□□□□□ -0.82
LSG1-205ENST00000461343 PDE3BQ13370 1112 aa9.93□□□□□ -0.82
LSG1-205ENST00000461343 NGDNQ8NEJ9 315 aaKnown RBP9.93□□□□□ -0.82
LSG1-205ENST00000461343 COG3Q96JB2 828 aa9.93□□□□□ -0.82
LSG1-205ENST00000461343 C19orf44Q9H6X5 657 aa9.93□□□□□ -0.82
LSG1-205ENST00000461343 MON2Q7Z3U7 1717 aa9.93□□□□□ -0.82
LSG1-205ENST00000461343 LMTK3Q96Q04 1460 aa9.92□□□□□ -0.82
LSG1-205ENST00000461343 CD163L1Q9NR16 1453 aa9.92□□□□□ -0.82
LSG1-205ENST00000461343 AATKQ6ZMQ8 1374 aa9.92□□□□□ -0.82
LSG1-205ENST00000461343 NEFMP07197 916 aa9.92□□□□□ -0.82
LSG1-205ENST00000461343 CNGB1Q14028 1251 aaPredicted RBP9.92□□□□□ -0.82
LSG1-205ENST00000461343 NCBP3Q53F19 620 aaKnown RBP9.92□□□□□ -0.82
LSG1-205ENST00000461343 PROSER2Q86WR7 435 aaPredicted RBP9.92□□□□□ -0.82
LSG1-205ENST00000461343 AKAP12Q02952 1782 aa9.92□□□□□ -0.82
LSG1-205ENST00000461343 FMN2Q9NZ56 1722 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms