RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 ZNF428Q96B54 188 aa10.23□□□□□ -0.77
MCF2L2-205ENST00000461074 RALYLQ86SE5 291 aaKnown RBP10.22□□□□□ -0.77
MCF2L2-205ENST00000461074 PIP4K2AP48426 406 aaPredicted RBP10.22□□□□□ -0.77
MCF2L2-205ENST00000461074 TSPYL4Q9UJ04 414 aa10.22□□□□□ -0.77
MCF2L2-205ENST00000461074 DNMBPQ6XZF7 1577 aa10.22□□□□□ -0.77
MCF2L2-205ENST00000461074 FKBP5Q13451 457 aaPredicted RBP10.22□□□□□ -0.77
MCF2L2-205ENST00000461074 TOP2BQ02880 1626 aa10.22□□□□□ -0.77
MCF2L2-205ENST00000461074 CHMP5Q9NZZ3 219 aa10.22□□□□□ -0.77
MCF2L2-205ENST00000461074 DHX16O60231 1041 aaKnown RBP10.22□□□□□ -0.77
MCF2L2-205ENST00000461074 PDCP20941 246 aa10.22□□□□□ -0.77
MCF2L2-205ENST00000461074 ACBD3Q9H3P7 528 aa10.22□□□□□ -0.77
MCF2L2-205ENST00000461074 TBC1D2BQ9UPU7 963 aa10.22□□□□□ -0.77
MCF2L2-205ENST00000461074 TROQ12816 1431 aaPredicted RBP10.21□□□□□ -0.77
MCF2L2-205ENST00000461074 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.21□□□□□ -0.77
MCF2L2-205ENST00000461074 ANO2Q9NQ90 1003 aa10.21□□□□□ -0.77
MCF2L2-205ENST00000461074 DDX49Q9Y6V7 483 aaKnown RBP10.21□□□□□ -0.77
MCF2L2-205ENST00000461074 CUL7Q14999 1698 aa10.21□□□□□ -0.77
MCF2L2-205ENST00000461074 CCDC141Q6ZP82 1450 aa10.21□□□□□ -0.78
MCF2L2-205ENST00000461074 GNL3LQ9NVN8 582 aaKnown RBP10.21□□□□□ -0.78
MCF2L2-205ENST00000461074 KIF6Q6ZMV9 814 aa10.2□□□□□ -0.78
MCF2L2-205ENST00000461074 CNTROBQ8N137 903 aa10.2□□□□□ -0.78
MCF2L2-205ENST00000461074 RAD54L2Q9Y4B4 1467 aa10.2□□□□□ -0.78
MCF2L2-205ENST00000461074 ATAD2Q6PL18 1390 aa10.2□□□□□ -0.78
MCF2L2-205ENST00000461074 CCDC73Q6ZRK6 1079 aa10.2□□□□□ -0.78
MCF2L2-205ENST00000461074 PRM3Q9NNZ6 103 aa10.2□□□□□ -0.78
MCF2L2-205ENST00000461074 MYO6Q9UM54 1294 aa10.2□□□□□ -0.78
MCF2L2-205ENST00000461074 PRG4Q92954 1404 aaPredicted RBP10.2□□□□□ -0.78
MCF2L2-205ENST00000461074 C9orf84Q5VXU9 1444 aa10.2□□□□□ -0.78
MCF2L2-205ENST00000461074 KIAA1107Q9UPP5 1409 aa10.2□□□□□ -0.78
MCF2L2-205ENST00000461074 APPP05067 770 aa10.19□□□□□ -0.78
MCF2L2-205ENST00000461074 UBTFL1P0CB47 393 aaPredicted RBP10.19□□□□□ -0.78
MCF2L2-205ENST00000461074 CCP110O43303 1012 aa10.19□□□□□ -0.78
MCF2L2-205ENST00000461074 NFXL1Q6ZNB6 911 aa10.19□□□□□ -0.78
MCF2L2-205ENST00000461074 RIC3Q7Z5B4 369 aa10.19□□□□□ -0.78
MCF2L2-205ENST00000461074 TXLNBQ8N3L3 684 aa10.19□□□□□ -0.78
MCF2L2-205ENST00000461074 CDC45O75419 566 aa10.19□□□□□ -0.78
MCF2L2-205ENST00000461074 NUTM2DQ5VT03 806 aaPredicted RBP10.19□□□□□ -0.78
MCF2L2-205ENST00000461074 CWC22Q9HCG8 908 aaKnown RBP10.19□□□□□ -0.78
MCF2L2-205ENST00000461074 SMC3Q9UQE7 1217 aa10.19□□□□□ -0.78
MCF2L2-205ENST00000461074 PDE4AP27815 886 aa10.19□□□□□ -0.78
MCF2L2-205ENST00000461074 PES1O00541 588 aaKnown RBP10.19□□□□□ -0.78
MCF2L2-205ENST00000461074 APAF1O14727 1248 aa10.18□□□□□ -0.78
MCF2L2-205ENST00000461074 IL27Q8NEV9 243 aa10.18□□□□□ -0.78
MCF2L2-205ENST00000461074 MSH5O43196 834 aa10.18□□□□□ -0.78
MCF2L2-205ENST00000461074 TNNT3P45378 269 aaPredicted RBP10.18□□□□□ -0.78
MCF2L2-205ENST00000461074 MCTP1Q6DN14 999 aa10.18□□□□□ -0.78
MCF2L2-205ENST00000461074 LAMC3Q9Y6N6 1575 aa10.18□□□□□ -0.78
MCF2L2-205ENST00000461074 EIF2S2P20042 333 aaKnown RBP10.18□□□□□ -0.78
MCF2L2-205ENST00000461074 CLASRPQ8N2M8 674 aaKnown RBP10.18□□□□□ -0.78
MCF2L2-205ENST00000461074 GCC1Q96CN9 775 aa10.18□□□□□ -0.78
MCF2L2-205ENST00000461074 R3HCC1Q9Y3T6 440 aaKnown RBP10.18□□□□□ -0.78
MCF2L2-205ENST00000461074 ZSCAN25Q6NSZ9 544 aa10.17□□□□□ -0.78
MCF2L2-205ENST00000461074 SASS6Q6UVJ0 657 aa10.17□□□□□ -0.78
MCF2L2-205ENST00000461074 CCDC173Q0VFZ6 552 aa10.17□□□□□ -0.78
MCF2L2-205ENST00000461074 GZF1Q9H116 711 aaPredicted RBP10.17□□□□□ -0.78
MCF2L2-205ENST00000461074 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.17□□□□□ -0.78
MCF2L2-205ENST00000461074 RRP7AQ9Y3A4 280 aaKnown RBP10.17□□□□□ -0.78
MCF2L2-205ENST00000461074 TATP17735 454 aaPredicted RBP10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 CCT4P50991 539 aaKnown RBP10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 ANKRD1Q15327 319 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 OLFM4Q6UX06 510 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 RSPH6AQ9H0K4 717 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 TXLNAP40222 546 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 TEX35Q5T0J7 233 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 PDE3AQ14432 1141 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 CREBRFQ8IUR6 639 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 SRCIN1Q9C0H9 1055 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 FANCIQ9NVI1 1328 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 MBD3O95983 291 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 ARGLU1Q9NWB6 273 aaPredicted RBP10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 JMYQ8N9B5 988 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 PPP6R1Q9UPN7 881 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 SPG7Q9UQ90 795 aa10.16□□□□□ -0.78
MCF2L2-205ENST00000461074 WWC2Q6AWC2 1192 aa10.15□□□□□ -0.78
MCF2L2-205ENST00000461074 TOPBP1Q92547 1522 aa10.15□□□□□ -0.78
MCF2L2-205ENST00000461074 NUTM2FA1L443 756 aa10.15□□□□□ -0.78
MCF2L2-205ENST00000461074 BICD2Q8TD16 824 aa10.15□□□□□ -0.78
MCF2L2-205ENST00000461074 PCMTD1Q96MG8 357 aaPredicted RBP10.15□□□□□ -0.78
MCF2L2-205ENST00000461074 CRBNQ96SW2 442 aa10.15□□□□□ -0.78
MCF2L2-205ENST00000461074 AQRO60306 1485 aaKnown RBP eCLIP10.15□□□□□ -0.78
MCF2L2-205ENST00000461074 NLRP2Q9NX02 1062 aa10.15□□□□□ -0.78
MCF2L2-205ENST00000461074 NLRP6P59044 892 aa10.15□□□□□ -0.79
MCF2L2-205ENST00000461074 COG6Q9Y2V7 657 aa10.15□□□□□ -0.79
MCF2L2-205ENST00000461074 AK7Q96M32 723 aa10.14□□□□□ -0.79
MCF2L2-205ENST00000461074 KIAA0586Q9BVV6 1533 aa10.14□□□□□ -0.79
MCF2L2-205ENST00000461074 WDR63Q8IWG1 891 aa10.14□□□□□ -0.79
MCF2L2-205ENST00000461074 ERCC4Q92889 916 aaPredicted RBP10.14□□□□□ -0.79
MCF2L2-205ENST00000461074 ZNF396Q96N95 335 aaPredicted RBP10.14□□□□□ -0.79
MCF2L2-205ENST00000461074 EPRSP07814 1512 aaKnown RBP10.14□□□□□ -0.79
MCF2L2-205ENST00000461074 MTERF4Q7Z6M4 381 aaKnown RBP10.13□□□□□ -0.79
MCF2L2-205ENST00000461074 LUC7LQ9NQ29 371 aaKnown RBP10.13□□□□□ -0.79
MCF2L2-205ENST00000461074 NCBP3Q53F19 620 aaKnown RBP10.13□□□□□ -0.79
MCF2L2-205ENST00000461074 NOL8Q76FK4 1167 aaKnown RBP10.13□□□□□ -0.79
MCF2L2-205ENST00000461074 RUSC2Q8N2Y8 1516 aa10.13□□□□□ -0.79
MCF2L2-205ENST00000461074 TIAM1Q13009 1591 aa10.13□□□□□ -0.79
MCF2L2-205ENST00000461074 TXNDC2Q86VQ3 553 aa10.13□□□□□ -0.79
MCF2L2-205ENST00000461074 NACAP1Q9BZK3 213 aa10.13□□□□□ -0.79
MCF2L2-205ENST00000461074 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.13□□□□□ -0.79
MCF2L2-205ENST00000461074 CC2D2AQ9P2K1 1620 aa10.13□□□□□ -0.79
MCF2L2-205ENST00000461074 RABEP1Q15276 862 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms