RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 TRAK1Q9UPV9 953 aa14.96□□□□□ -0.01
NEDD9-206ENST00000461055 KNSTRNQ9Y448 316 aa14.96□□□□□ -0.01
NEDD9-206ENST00000461055 EVC2Q86UK5 1308 aa14.95□□□□□ -0.02
NEDD9-206ENST00000461055 MYO5BQ9ULV0 1848 aa14.95□□□□□ -0.02
NEDD9-206ENST00000461055 POTEAQ6S8J7 498 aa14.95□□□□□ -0.02
NEDD9-206ENST00000461055 PROSER2Q86WR7 435 aaPredicted RBP14.95□□□□□ -0.02
NEDD9-206ENST00000461055 PARD3Q8TEW0 1356 aa14.95□□□□□ -0.02
NEDD9-206ENST00000461055 TMEM2Q9UHN6 1383 aa14.95□□□□□ -0.02
NEDD9-206ENST00000461055 TMEM132EQ6IEE7 984 aa14.94□□□□□ -0.02
NEDD9-206ENST00000461055 NLRP13Q86W25 1043 aa14.94□□□□□ -0.02
NEDD9-206ENST00000461055 XIRP1Q702N8 1843 aaKnown RBP14.94□□□□□ -0.02
NEDD9-206ENST00000461055 SLIT1O75093 1534 aa14.93□□□□□ -0.02
NEDD9-206ENST00000461055 TMC1Q8TDI8 760 aa14.93□□□□□ -0.02
NEDD9-206ENST00000461055 SIRT1Q96EB6 747 aa14.93□□□□□ -0.02
NEDD9-206ENST00000461055 TMEM94Q12767 1356 aa14.93□□□□□ -0.02
NEDD9-206ENST00000461055 NINLQ9Y2I6 1382 aa14.93□□□□□ -0.02
NEDD9-206ENST00000461055 YTHDC2Q9H6S0 1430 aaKnown RBP14.92□□□□□ -0.02
NEDD9-206ENST00000461055 KCNA6P17658 529 aa14.92□□□□□ -0.02
NEDD9-206ENST00000461055 DLC1Q96QB1 1528 aa14.92□□□□□ -0.02
NEDD9-206ENST00000461055 LRPPRCP42704 1394 aaKnown RBP14.91□□□□□ -0.02
NEDD9-206ENST00000461055 NUTM2DQ5VT03 806 aaPredicted RBP14.91□□□□□ -0.02
NEDD9-206ENST00000461055 BCANQ96GW7 911 aa14.91□□□□□ -0.02
NEDD9-206ENST00000461055 QRICH2Q9H0J4 1663 aa14.9□□□□□ -0.02
NEDD9-206ENST00000461055 INSRP06213 1382 aa14.9□□□□□ -0.02
NEDD9-206ENST00000461055 ABCC11Q96J66 1382 aa14.9□□□□□ -0.02
NEDD9-206ENST00000461055 POGKQ9P215 609 aa14.89□□□□□ -0.03
NEDD9-206ENST00000461055 ARHGEF28Q8N1W1 1705 aaKnown RBP14.89□□□□□ -0.03
NEDD9-206ENST00000461055 ASXL1Q8IXJ9 1541 aa14.88□□□□□ -0.03
NEDD9-206ENST00000461055 FAM135BQ49AJ0 1406 aa14.88□□□□□ -0.03
NEDD9-206ENST00000461055 HNRNPUQ00839 825 aaKnown RBP eCLIP14.87□□□□□ -0.03
NEDD9-206ENST00000461055 AMER1Q5JTC6 1135 aaPredicted RBP14.87□□□□□ -0.03
NEDD9-206ENST00000461055 PNISRQ8TF01 805 aaKnown RBP14.87□□□□□ -0.03
NEDD9-206ENST00000461055 ATAD2Q6PL18 1390 aa14.86□□□□□ -0.03
NEDD9-206ENST00000461055 CCDC184Q52MB2 194 aa14.86□□□□□ -0.03
NEDD9-206ENST00000461055 FAM9BQ8IZU0 186 aa14.86□□□□□ -0.03
NEDD9-206ENST00000461055 PLEKHG1Q9ULL1 1385 aa14.85□□□□□ -0.03
NEDD9-206ENST00000461055 MYOM1P52179 1685 aa14.85□□□□□ -0.03
NEDD9-206ENST00000461055 SLAIN2Q9P270 581 aa14.85□□□□□ -0.03
NEDD9-206ENST00000461055 STK26Q9P289 416 aa14.85□□□□□ -0.03
NEDD9-206ENST00000461055 GTF3C3Q9Y5Q9 886 aa14.85□□□□□ -0.03
NEDD9-206ENST00000461055 PRAM1Q96QH2 718 aa14.84□□□□□ -0.03
NEDD9-206ENST00000461055 ZBED9Q6R2W3 1325 aa14.84□□□□□ -0.03
NEDD9-206ENST00000461055 TECPR2O15040 1411 aa14.83□□□□□ -0.03
NEDD9-206ENST00000461055 CC2D1BQ5T0F9 858 aaKnown RBP14.83□□□□□ -0.04
NEDD9-206ENST00000461055 NSD2O96028 1365 aa14.82□□□□□ -0.04
NEDD9-206ENST00000461055 ANKRD36BQ8N2N9 1353 aa14.82□□□□□ -0.04
NEDD9-206ENST00000461055 SETD1AO15047 1707 aaKnown RBP14.81□□□□□ -0.04
NEDD9-206ENST00000461055 TULP4Q9NRJ4 1543 aa14.81□□□□□ -0.04
NEDD9-206ENST00000461055 ROBO1Q9Y6N7 1651 aa14.81□□□□□ -0.04
NEDD9-206ENST00000461055 TERF2IPQ9NYB0 399 aa14.8□□□□□ -0.04
NEDD9-206ENST00000461055 TBX22Q9Y458 520 aa14.8□□□□□ -0.04
NEDD9-206ENST00000461055 CGNL1Q0VF96 1302 aa14.8□□□□□ -0.04
NEDD9-206ENST00000461055 SRPK2P78362 688 aaKnown RBP14.79□□□□□ -0.04
NEDD9-206ENST00000461055 KNDC1Q76NI1 1749 aa14.79□□□□□ -0.04
NEDD9-206ENST00000461055 USP32Q8NFA0 1604 aa14.79□□□□□ -0.04
NEDD9-206ENST00000461055 CARD14Q9BXL6 1004 aa14.79□□□□□ -0.04
NEDD9-206ENST00000461055 NRXN3Q9Y4C0 1643 aa14.79□□□□□ -0.04
NEDD9-206ENST00000461055 PPP2R1AP30153 589 aa14.78□□□□□ -0.04
NEDD9-206ENST00000461055 CNGB1Q14028 1251 aaPredicted RBP14.78□□□□□ -0.04
NEDD9-206ENST00000461055 SLC12A5Q9H2X9 1139 aa14.78□□□□□ -0.04
NEDD9-206ENST00000461055 DIP2AQ14689 1571 aa14.77□□□□□ -0.04
NEDD9-206ENST00000461055 METP08581 1390 aa14.77□□□□□ -0.04
NEDD9-206ENST00000461055 MSH6P52701 1360 aa14.77□□□□□ -0.04
NEDD9-206ENST00000461055 ADAMTS13Q76LX8 1427 aa14.76□□□□□ -0.05
NEDD9-206ENST00000461055 MINK1Q8N4C8 1332 aaPredicted RBP14.76□□□□□ -0.05
NEDD9-206ENST00000461055 HDGFL2Q7Z4V5 671 aaPredicted RBP14.76□□□□□ -0.05
NEDD9-206ENST00000461055 CDK19Q9BWU1 502 aa14.76□□□□□ -0.05
NEDD9-206ENST00000461055 NSD3Q9BZ95 1437 aa14.75□□□□□ -0.05
NEDD9-206ENST00000461055 PIK3R4Q99570 1358 aa14.75□□□□□ -0.05
NEDD9-206ENST00000461055 C14orf37Q86TY3 774 aa14.75□□□□□ -0.05
NEDD9-206ENST00000461055 CABP2Q9NPB3 220 aa14.75□□□□□ -0.05
NEDD9-206ENST00000461055 SAFB2Q14151 953 aaKnown RBP eCLIP14.74□□□□□ -0.05
NEDD9-206ENST00000461055 WASLO00401 505 aaPredicted RBP14.73□□□□□ -0.05
NEDD9-206ENST00000461055 PDE3BQ13370 1112 aa14.73□□□□□ -0.05
NEDD9-206ENST00000461055 MORC1Q86VD1 984 aa14.73□□□□□ -0.05
NEDD9-206ENST00000461055 NGEFQ8N5V2 710 aa14.73□□□□□ -0.05
NEDD9-206ENST00000461055 WDR43Q15061 677 aaKnown RBP eCLIP14.72□□□□□ -0.05
NEDD9-206ENST00000461055 NWD1Q149M9 1564 aa14.72□□□□□ -0.05
NEDD9-206ENST00000461055 JCADQ9P266 1359 aa14.72□□□□□ -0.05
NEDD9-206ENST00000461055 NKTRP30414 1462 aaKnown RBP14.71□□□□□ -0.05
NEDD9-206ENST00000461055 ATP7BP35670 1465 aa14.71□□□□□ -0.05
NEDD9-206ENST00000461055 NEFLP07196 543 aa14.71□□□□□ -0.05
NEDD9-206ENST00000461055 WAPLQ7Z5K2 1190 aa14.71□□□□□ -0.05
NEDD9-206ENST00000461055 AMOTL2Q9Y2J4 779 aa14.71□□□□□ -0.05
NEDD9-206ENST00000461055 POLR3AO14802 1390 aaPredicted RBP14.71□□□□□ -0.06
NEDD9-206ENST00000461055 CHD2O14647 1828 aaKnown RBP14.71□□□□□ -0.06
NEDD9-206ENST00000461055 PHLPP1O60346 1717 aa14.7□□□□□ -0.06
NEDD9-206ENST00000461055 NUTM2BA6NNL0 878 aaPredicted RBP14.7□□□□□ -0.06
NEDD9-206ENST00000461055 NUTM2EB1AL46 878 aaPredicted RBP14.7□□□□□ -0.06
NEDD9-206ENST00000461055 NUTM2AQ8IVF1 878 aaPredicted RBP14.7□□□□□ -0.06
NEDD9-206ENST00000461055 LRP6O75581 1613 aa14.7□□□□□ -0.06
NEDD9-206ENST00000461055 BLMP54132 1417 aaPredicted RBP14.69□□□□□ -0.06
NEDD9-206ENST00000461055 PTCH1Q13635 1447 aa14.69□□□□□ -0.06
NEDD9-206ENST00000461055 PTPRUQ92729 1446 aa14.69□□□□□ -0.06
NEDD9-206ENST00000461055 DDX17Q92841 729 aaKnown RBP14.69□□□□□ -0.06
NEDD9-206ENST00000461055 ZNF692Q9BU19 519 aaPredicted RBP14.69□□□□□ -0.06
NEDD9-206ENST00000461055 C19orf44Q9H6X5 657 aa14.69□□□□□ -0.06
NEDD9-206ENST00000461055 ATF3P18847 181 aa14.68□□□□□ -0.06
NEDD9-206ENST00000461055 MEX3CQ5U5Q3 659 aaKnown RBP14.68□□□□□ -0.06
NEDD9-206ENST00000461055 CFAP53Q96M91 514 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms