RNA–Protein interactions for RNA: ENST00000460043.5

CDK5RAP1-205, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 535 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-205ENST00000460043 ARHGEF28Q8N1W1 1705 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP1-205ENST00000460043 PRAM1Q96QH2 718 aa19.2■□□□□ 0.66
CDK5RAP1-205ENST00000460043 SLC26A8Q96RN1 970 aa19.2■□□□□ 0.66
CDK5RAP1-205ENST00000460043 PIP4K2BP78356 416 aa19.19■□□□□ 0.66
CDK5RAP1-205ENST00000460043 EVC2Q86UK5 1308 aa19.19■□□□□ 0.66
CDK5RAP1-205ENST00000460043 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP1-205ENST00000460043 QRICH2Q9H0J4 1663 aa19.18■□□□□ 0.66
CDK5RAP1-205ENST00000460043 TECPR2O15040 1411 aa19.17■□□□□ 0.66
CDK5RAP1-205ENST00000460043 PUS7Q96PZ0 661 aaKnown RBP19.17■□□□□ 0.66
CDK5RAP1-205ENST00000460043 FAM135BQ49AJ0 1406 aa19.17■□□□□ 0.66
CDK5RAP1-205ENST00000460043 PIK3R4Q99570 1358 aa19.16■□□□□ 0.66
CDK5RAP1-205ENST00000460043 SAFB2Q14151 953 aaKnown RBP eCLIP19.15■□□□□ 0.66
CDK5RAP1-205ENST00000460043 NPHP4O75161 1426 aaPredicted RBP19.15■□□□□ 0.66
CDK5RAP1-205ENST00000460043 KNDC1Q76NI1 1749 aa19.14■□□□□ 0.65
CDK5RAP1-205ENST00000460043 MINK1Q8N4C8 1332 aaPredicted RBP19.12■□□□□ 0.65
CDK5RAP1-205ENST00000460043 AMOTL2Q9Y2J4 779 aa19.12■□□□□ 0.65
CDK5RAP1-205ENST00000460043 WAPLQ7Z5K2 1190 aa19.11■□□□□ 0.65
CDK5RAP1-205ENST00000460043 PHF23Q9BUL5 403 aaPredicted RBP19.11■□□□□ 0.65
CDK5RAP1-205ENST00000460043 SRPK2P78362 688 aaKnown RBP19.09■□□□□ 0.65
CDK5RAP1-205ENST00000460043 PANK3Q9H999 370 aa19.09■□□□□ 0.65
CDK5RAP1-205ENST00000460043 TULP4Q9NRJ4 1543 aa19.09■□□□□ 0.65
CDK5RAP1-205ENST00000460043 PTPRUQ92729 1446 aa19.08■□□□□ 0.65
CDK5RAP1-205ENST00000460043 PLEKHH1Q9ULM0 1364 aa19.08■□□□□ 0.65
CDK5RAP1-205ENST00000460043 PTCH1Q13635 1447 aa19.08■□□□□ 0.64
CDK5RAP1-205ENST00000460043 ROBO2Q9HCK4 1378 aa19.07■□□□□ 0.64
CDK5RAP1-205ENST00000460043 ATAD2Q6PL18 1390 aa19.06■□□□□ 0.64
CDK5RAP1-205ENST00000460043 NINLQ9Y2I6 1382 aa19.06■□□□□ 0.64
CDK5RAP1-205ENST00000460043 TMC1Q8TDI8 760 aa19.05■□□□□ 0.64
CDK5RAP1-205ENST00000460043 CDK19Q9BWU1 502 aa19.05■□□□□ 0.64
CDK5RAP1-205ENST00000460043 CABP2Q9NPB3 220 aa19.05■□□□□ 0.64
CDK5RAP1-205ENST00000460043 CCER2I3L3R5 266 aa19.04■□□□□ 0.64
CDK5RAP1-205ENST00000460043 WASLO00401 505 aaPredicted RBP19.03■□□□□ 0.64
CDK5RAP1-205ENST00000460043 PRKRIP1Q9H875 184 aaPredicted RBP19.03■□□□□ 0.64
CDK5RAP1-205ENST00000460043 KNSTRNQ9Y448 316 aa19.03■□□□□ 0.64
CDK5RAP1-205ENST00000460043 XRN1Q8IZH2 1706 aaKnown RBP19.03■□□□□ 0.64
CDK5RAP1-205ENST00000460043 PER1O15534 1290 aaPredicted RBP19.02■□□□□ 0.64
CDK5RAP1-205ENST00000460043 KCNA6P17658 529 aa19.02■□□□□ 0.64
CDK5RAP1-205ENST00000460043 KTN1Q86UP2 1357 aaKnown RBP19.02■□□□□ 0.64
CDK5RAP1-205ENST00000460043 LRRC7Q96NW7 1537 aa19.01■□□□□ 0.63
CDK5RAP1-205ENST00000460043 MYOM1P52179 1685 aa19■□□□□ 0.63
CDK5RAP1-205ENST00000460043 RALBP1Q15311 655 aa18.99■□□□□ 0.63
CDK5RAP1-205ENST00000460043 SLC12A5Q9H2X9 1139 aa18.99■□□□□ 0.63
CDK5RAP1-205ENST00000460043 STRCP1A6NGW2 1772 aa18.98■□□□□ 0.63
CDK5RAP1-205ENST00000460043 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
CDK5RAP1-205ENST00000460043 TERF2IPQ9NYB0 399 aa18.97■□□□□ 0.63
CDK5RAP1-205ENST00000460043 ANKRD36BQ8N2N9 1353 aa18.96■□□□□ 0.63
CDK5RAP1-205ENST00000460043 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
CDK5RAP1-205ENST00000460043 HDGFL2Q7Z4V5 671 aaPredicted RBP18.95■□□□□ 0.62
CDK5RAP1-205ENST00000460043 RGS17Q9UGC6 210 aaPredicted RBP18.95■□□□□ 0.62
CDK5RAP1-205ENST00000460043 CHD2O14647 1828 aaKnown RBP18.95■□□□□ 0.62
CDK5RAP1-205ENST00000460043 NPC1L1Q9UHC9 1359 aa18.94■□□□□ 0.62
CDK5RAP1-205ENST00000460043 NUDT16Q96DE0 195 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP1-205ENST00000460043 NWD1Q149M9 1564 aa18.93■□□□□ 0.62
CDK5RAP1-205ENST00000460043 CC2D1BQ5T0F9 858 aaKnown RBP18.93■□□□□ 0.62
CDK5RAP1-205ENST00000460043 CCDC61Q9Y6R9 512 aa18.93■□□□□ 0.62
CDK5RAP1-205ENST00000460043 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP1-205ENST00000460043 CABP1Q9NZU7 370 aa18.92■□□□□ 0.62
CDK5RAP1-205ENST00000460043 NSD3Q9BZ95 1437 aa18.91■□□□□ 0.62
CDK5RAP1-205ENST00000460043 NKTRP30414 1462 aaKnown RBP18.91■□□□□ 0.62
CDK5RAP1-205ENST00000460043 AMER1Q5JTC6 1135 aaPredicted RBP18.91■□□□□ 0.62
CDK5RAP1-205ENST00000460043 CARD14Q9BXL6 1004 aa18.91■□□□□ 0.62
CDK5RAP1-205ENST00000460043 PARD3Q8TEW0 1356 aa18.91■□□□□ 0.62
CDK5RAP1-205ENST00000460043 ATP7BP35670 1465 aa18.9■□□□□ 0.62
CDK5RAP1-205ENST00000460043 PROSER2Q86WR7 435 aaPredicted RBP18.9■□□□□ 0.62
CDK5RAP1-205ENST00000460043 MYBBP1AQ9BQG0 1328 aaKnown RBP18.9■□□□□ 0.62
CDK5RAP1-205ENST00000460043 PPIP5K1Q6PFW1 1433 aa18.9■□□□□ 0.62
CDK5RAP1-205ENST00000460043 C14orf37Q86TY3 774 aa18.89■□□□□ 0.61
CDK5RAP1-205ENST00000460043 CGNL1Q0VF96 1302 aa18.89■□□□□ 0.61
CDK5RAP1-205ENST00000460043 A0A1W2PP64 1363 aa18.89■□□□□ 0.61
CDK5RAP1-205ENST00000460043 ADGRL3Q9HAR2 1447 aa18.87■□□□□ 0.61
CDK5RAP1-205ENST00000460043 MRS2Q9HD23 443 aa18.87■□□□□ 0.61
CDK5RAP1-205ENST00000460043 ANKARQ7Z5J8 1434 aa18.86■□□□□ 0.61
CDK5RAP1-205ENST00000460043 NSD2O96028 1365 aa18.86■□□□□ 0.61
CDK5RAP1-205ENST00000460043 PRR36Q9H6K5 1346 aa18.86■□□□□ 0.61
CDK5RAP1-205ENST00000460043 NLRP13Q86W25 1043 aa18.85■□□□□ 0.61
CDK5RAP1-205ENST00000460043 ZNF692Q9BU19 519 aaPredicted RBP18.85■□□□□ 0.61
CDK5RAP1-205ENST00000460043 USP32Q8NFA0 1604 aa18.85■□□□□ 0.61
CDK5RAP1-205ENST00000460043 CDC42BPGQ6DT37 1551 aa18.85■□□□□ 0.61
CDK5RAP1-205ENST00000460043 CD163L1Q9NR16 1453 aa18.84■□□□□ 0.61
CDK5RAP1-205ENST00000460043 PLEKHG3A1L390 1219 aa18.84■□□□□ 0.61
CDK5RAP1-205ENST00000460043 NCOA3Q9Y6Q9 1424 aa18.83■□□□□ 0.61
CDK5RAP1-205ENST00000460043 BRD4O60885 1362 aaPredicted RBP18.83■□□□□ 0.61
CDK5RAP1-205ENST00000460043 NUTM2FA1L443 756 aa18.83■□□□□ 0.6
CDK5RAP1-205ENST00000460043 XIRP1Q702N8 1843 aaKnown RBP18.83■□□□□ 0.6
CDK5RAP1-205ENST00000460043 CPSF1Q10570 1443 aaKnown RBP18.83■□□□□ 0.6
CDK5RAP1-205ENST00000460043 MORC1Q86VD1 984 aa18.81■□□□□ 0.6
CDK5RAP1-205ENST00000460043 RBM33Q96EV2 1170 aaKnown RBP18.81■□□□□ 0.6
CDK5RAP1-205ENST00000460043 YTHDC1Q96MU7 727 aaKnown RBP18.81■□□□□ 0.6
CDK5RAP1-205ENST00000460043 EDC4Q6P2E9 1401 aaKnown RBP18.81■□□□□ 0.6
CDK5RAP1-205ENST00000460043 NALCNQ8IZF0 1738 aa18.8■□□□□ 0.6
CDK5RAP1-205ENST00000460043 POTEAQ6S8J7 498 aa18.8■□□□□ 0.6
CDK5RAP1-205ENST00000460043 C19orf44Q9H6X5 657 aa18.8■□□□□ 0.6
CDK5RAP1-205ENST00000460043 FMN2Q9NZ56 1722 aa18.79■□□□□ 0.6
CDK5RAP1-205ENST00000460043 TMEM94Q12767 1356 aa18.79■□□□□ 0.6
CDK5RAP1-205ENST00000460043 TOPAZ1Q8N9V7 1692 aa18.79■□□□□ 0.6
CDK5RAP1-205ENST00000460043 ACEP12821 1306 aa18.78■□□□□ 0.6
CDK5RAP1-205ENST00000460043 ITSN1Q15811 1721 aa18.78■□□□□ 0.6
CDK5RAP1-205ENST00000460043 PPP2R1AP30153 589 aa18.78■□□□□ 0.6
CDK5RAP1-205ENST00000460043 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
CDK5RAP1-205ENST00000460043 NGDNQ8NEJ9 315 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms