RNA–Protein interactions for RNA: ENST00000459873.1

PCCB-202, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-202ENST00000459873 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
PCCB-202ENST00000459873 PROSER2Q86WR7 435 aaPredicted RBP13.14□□□□□ -0.31
PCCB-202ENST00000459873 RBM33Q96EV2 1170 aaKnown RBP13.13□□□□□ -0.31
PCCB-202ENST00000459873 STK26Q9P289 416 aa13.13□□□□□ -0.31
PCCB-202ENST00000459873 KIF1AQ12756 1690 aa13.12□□□□□ -0.31
PCCB-202ENST00000459873 EIF3AQ14152 1382 aaKnown RBP13.12□□□□□ -0.31
PCCB-202ENST00000459873 AHDC1Q5TGY3 1603 aaPredicted RBP13.11□□□□□ -0.31
PCCB-202ENST00000459873 SIRT1Q96EB6 747 aa13.11□□□□□ -0.31
PCCB-202ENST00000459873 ATP7BP35670 1465 aa13.1□□□□□ -0.31
PCCB-202ENST00000459873 SBNO2Q9Y2G9 1366 aa13.1□□□□□ -0.31
PCCB-202ENST00000459873 RGPD8O14715 1765 aaPredicted RBP13.1□□□□□ -0.31
PCCB-202ENST00000459873 PRAM1Q96QH2 718 aa13.1□□□□□ -0.31
PCCB-202ENST00000459873 TRAK1Q9UPV9 953 aa13.1□□□□□ -0.31
PCCB-202ENST00000459873 WAPLQ7Z5K2 1190 aa13.09□□□□□ -0.31
PCCB-202ENST00000459873 COL16A1Q07092 1604 aaPredicted RBP13.08□□□□□ -0.32
PCCB-202ENST00000459873 C1orf167Q5SNV9 1468 aa13.08□□□□□ -0.32
PCCB-202ENST00000459873 ANKARQ7Z5J8 1434 aa13.07□□□□□ -0.32
PCCB-202ENST00000459873 C14orf37Q86TY3 774 aa13.07□□□□□ -0.32
PCCB-202ENST00000459873 C19orf44Q9H6X5 657 aa13.07□□□□□ -0.32
PCCB-202ENST00000459873 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
PCCB-202ENST00000459873 USP47Q96K76 1375 aa13.07□□□□□ -0.32
PCCB-202ENST00000459873 PHLPP1O60346 1717 aa13.06□□□□□ -0.32
PCCB-202ENST00000459873 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
PCCB-202ENST00000459873 CARD11Q9BXL7 1154 aa13.06□□□□□ -0.32
PCCB-202ENST00000459873 CADPS2Q86UW7 1296 aa13.05□□□□□ -0.32
PCCB-202ENST00000459873 FBXO41Q8TF61 875 aa13.05□□□□□ -0.32
PCCB-202ENST00000459873 MYOM1P52179 1685 aa13.05□□□□□ -0.32
PCCB-202ENST00000459873 TOM1O60784 492 aa13.04□□□□□ -0.32
PCCB-202ENST00000459873 SAFB2Q14151 953 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCCB-202ENST00000459873 POGKQ9P215 609 aa13.04□□□□□ -0.32
PCCB-202ENST00000459873 ATF3P18847 181 aa13.03□□□□□ -0.32
PCCB-202ENST00000459873 MINK1Q8N4C8 1332 aaPredicted RBP13.03□□□□□ -0.32
PCCB-202ENST00000459873 NRKQ7Z2Y5 1582 aa13.03□□□□□ -0.32
PCCB-202ENST00000459873 TRPM3Q9HCF6 1732 aaPredicted RBP13.02□□□□□ -0.32
PCCB-202ENST00000459873 SHPRHQ149N8 1683 aa13.02□□□□□ -0.33
PCCB-202ENST00000459873 AKAP12Q02952 1782 aa13.01□□□□□ -0.33
PCCB-202ENST00000459873 MON2Q7Z3U7 1717 aa13□□□□□ -0.33
PCCB-202ENST00000459873 PXDNQ92626 1479 aa13□□□□□ -0.33
PCCB-202ENST00000459873 PRR36Q9H6K5 1346 aa13□□□□□ -0.33
PCCB-202ENST00000459873 HIRIP3Q9BW71 556 aaPredicted RBP13□□□□□ -0.33
PCCB-202ENST00000459873 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
PCCB-202ENST00000459873 SLAIN2Q9P270 581 aa12.99□□□□□ -0.33
PCCB-202ENST00000459873 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
PCCB-202ENST00000459873 WASLO00401 505 aaPredicted RBP12.98□□□□□ -0.33
PCCB-202ENST00000459873 PIP4K2BP78356 416 aa12.98□□□□□ -0.33
PCCB-202ENST00000459873 BRINP3Q76B58 766 aa12.98□□□□□ -0.33
PCCB-202ENST00000459873 ALS2Q96Q42 1657 aa12.98□□□□□ -0.33
PCCB-202ENST00000459873 CRYBG1Q9Y4K1 1723 aa12.97□□□□□ -0.33
PCCB-202ENST00000459873 TESK2Q96S53 571 aa12.97□□□□□ -0.33
PCCB-202ENST00000459873 DISP3Q9P2K9 1392 aa12.96□□□□□ -0.33
PCCB-202ENST00000459873 SCAF1Q9H7N4 1312 aaKnown RBP12.96□□□□□ -0.33
PCCB-202ENST00000459873 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.34
PCCB-202ENST00000459873 MED1Q15648 1581 aaPredicted RBP12.95□□□□□ -0.34
PCCB-202ENST00000459873 ST20-MTHFSA0A0A6YYL1 179 aa12.95□□□□□ -0.34
PCCB-202ENST00000459873 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
PCCB-202ENST00000459873 EVC2Q86UK5 1308 aa12.94□□□□□ -0.34
PCCB-202ENST00000459873 USP54Q70EL1 1684 aa12.94□□□□□ -0.34
PCCB-202ENST00000459873 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
PCCB-202ENST00000459873 CD163L1Q9NR16 1453 aa12.93□□□□□ -0.34
PCCB-202ENST00000459873 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
PCCB-202ENST00000459873 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
PCCB-202ENST00000459873 ORAI2Q96SN7 254 aa12.93□□□□□ -0.34
PCCB-202ENST00000459873 CDK19Q9BWU1 502 aa12.93□□□□□ -0.34
PCCB-202ENST00000459873 PIK3C2AO00443 1686 aa12.93□□□□□ -0.34
PCCB-202ENST00000459873 PHRF1Q9P1Y6 1649 aaKnown RBP12.92□□□□□ -0.34
PCCB-202ENST00000459873 MARF1Q9Y4F3 1742 aaKnown RBP12.92□□□□□ -0.34
PCCB-202ENST00000459873 TNS3Q68CZ2 1445 aa12.91□□□□□ -0.34
PCCB-202ENST00000459873 HSPA1LP34931 641 aa12.91□□□□□ -0.34
PCCB-202ENST00000459873 NPHP3Q7Z494 1330 aa12.9□□□□□ -0.34
PCCB-202ENST00000459873 HSPA5P11021 654 aaKnown RBP12.9□□□□□ -0.34
PCCB-202ENST00000459873 EIF4G2P78344 907 aaKnown RBP eCLIP12.9□□□□□ -0.34
PCCB-202ENST00000459873 SRPK2P78362 688 aaKnown RBP12.9□□□□□ -0.34
PCCB-202ENST00000459873 ESCO1Q5FWF5 840 aa12.9□□□□□ -0.34
PCCB-202ENST00000459873 NUDT16Q96DE0 195 aaKnown RBP12.9□□□□□ -0.34
PCCB-202ENST00000459873 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
PCCB-202ENST00000459873 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
PCCB-202ENST00000459873 NINLQ9Y2I6 1382 aa12.9□□□□□ -0.34
PCCB-202ENST00000459873 SOS2Q07890 1332 aaPredicted RBP12.89□□□□□ -0.35
PCCB-202ENST00000459873 USP6P35125 1406 aa12.88□□□□□ -0.35
PCCB-202ENST00000459873 CPSF1Q10570 1443 aaKnown RBP12.88□□□□□ -0.35
PCCB-202ENST00000459873 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
PCCB-202ENST00000459873 DDX17Q92841 729 aaKnown RBP12.88□□□□□ -0.35
PCCB-202ENST00000459873 PNPLA6Q8IY17 1366 aa12.88□□□□□ -0.35
PCCB-202ENST00000459873 LRP6O75581 1613 aa12.88□□□□□ -0.35
PCCB-202ENST00000459873 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
PCCB-202ENST00000459873 JCADQ9P266 1359 aa12.87□□□□□ -0.35
PCCB-202ENST00000459873 PUS7Q96PZ0 661 aaKnown RBP12.87□□□□□ -0.35
PCCB-202ENST00000459873 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
PCCB-202ENST00000459873 SSH2Q76I76 1423 aa12.87□□□□□ -0.35
PCCB-202ENST00000459873 A0A1W2PP64 1363 aa12.86□□□□□ -0.35
PCCB-202ENST00000459873 PLEKHG3A1L390 1219 aa12.86□□□□□ -0.35
PCCB-202ENST00000459873 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
PCCB-202ENST00000459873 TMF1P82094 1093 aa12.86□□□□□ -0.35
PCCB-202ENST00000459873 PMFBP1Q8TBY8 1022 aa12.86□□□□□ -0.35
PCCB-202ENST00000459873 ACEP12821 1306 aa12.85□□□□□ -0.35
PCCB-202ENST00000459873 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
PCCB-202ENST00000459873 BRD4O60885 1362 aaPredicted RBP12.84□□□□□ -0.35
PCCB-202ENST00000459873 SLIT3O75094 1523 aa12.84□□□□□ -0.35
PCCB-202ENST00000459873 FOXO3O43524 673 aa12.84□□□□□ -0.35
PCCB-202ENST00000459873 ZEB1P37275 1124 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms