RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CT47A1Q5JQC4 288 aaPredicted RBP23.78■■□□□ 1.4
SNX27-204ENST00000458013 TEX35Q5T0J7 233 aa23.78■■□□□ 1.4
SNX27-204ENST00000458013 RNF20Q5VTR2 975 aa23.78■■□□□ 1.4
SNX27-204ENST00000458013 KRI1Q8N9T8 703 aaKnown RBP23.78■■□□□ 1.4
SNX27-204ENST00000458013 MNS1Q8NEH6 495 aa23.78■■□□□ 1.4
SNX27-204ENST00000458013 HOOK1Q9UJC3 728 aaKnown RBP23.77■■□□□ 1.4
SNX27-204ENST00000458013 NFKBIBQ15653 356 aa23.76■■□□□ 1.39
SNX27-204ENST00000458013 RBM33Q96EV2 1170 aaKnown RBP23.76■■□□□ 1.39
SNX27-204ENST00000458013 FAM43AQ8N2R8 423 aa23.76■■□□□ 1.39
SNX27-204ENST00000458013 BRPF1P55201 1214 aaPredicted RBP23.76■■□□□ 1.39
SNX27-204ENST00000458013 RUNDC1Q96C34 613 aa23.76■■□□□ 1.39
SNX27-204ENST00000458013 DDX58O95786 925 aaKnown RBP23.76■■□□□ 1.39
SNX27-204ENST00000458013 CAGE1Q8TC20 777 aa23.76■■□□□ 1.39
SNX27-204ENST00000458013 LRRFIP1Q32MZ4 808 aaKnown RBP23.75■■□□□ 1.39
SNX27-204ENST00000458013 EPS15P42566 896 aa23.75■■□□□ 1.39
SNX27-204ENST00000458013 RBM10P98175 930 aaKnown RBP23.75■■□□□ 1.39
SNX27-204ENST00000458013 CCDC73Q6ZRK6 1079 aa23.74■■□□□ 1.39
SNX27-204ENST00000458013 HSP90AB2PQ58FF8 381 aa23.74■■□□□ 1.39
SNX27-204ENST00000458013 SPC24Q8NBT2 197 aa23.74■■□□□ 1.39
SNX27-204ENST00000458013 TMEM132EQ6IEE7 984 aa23.74■■□□□ 1.39
SNX27-204ENST00000458013 CAVIN1Q6NZI2 390 aaKnown RBP23.74■■□□□ 1.39
SNX27-204ENST00000458013 FMNL2Q96PY5 1086 aa23.74■■□□□ 1.39
SNX27-204ENST00000458013 API5Q9BZZ5 524 aaKnown RBP23.73■■□□□ 1.39
SNX27-204ENST00000458013 RUSC2Q8N2Y8 1516 aa23.73■■□□□ 1.39
SNX27-204ENST00000458013 VGFO15240 615 aaPredicted RBP23.73■■□□□ 1.39
SNX27-204ENST00000458013 IKQ13123 557 aaPredicted RBP23.73■■□□□ 1.39
SNX27-204ENST00000458013 SMC2O95347 1197 aa23.73■■□□□ 1.39
SNX27-204ENST00000458013 RRP12Q5JTH9 1297 aaKnown RBP23.72■■□□□ 1.39
SNX27-204ENST00000458013 CDCA7LQ96GN5 454 aa23.72■■□□□ 1.39
SNX27-204ENST00000458013 CHMP4CQ96CF2 233 aa23.72■■□□□ 1.39
SNX27-204ENST00000458013 STK3Q13188 491 aa23.71■■□□□ 1.39
SNX27-204ENST00000458013 ODF2Q5BJF6 829 aa23.71■■□□□ 1.39
SNX27-204ENST00000458013 RALYLQ86SE5 291 aaKnown RBP23.71■■□□□ 1.39
SNX27-204ENST00000458013 FSD1Q9BTV5 496 aa23.71■■□□□ 1.39
SNX27-204ENST00000458013 OLFM4Q6UX06 510 aa23.7■■□□□ 1.39
SNX27-204ENST00000458013 JPH4Q96JJ6 628 aa23.7■■□□□ 1.39
SNX27-204ENST00000458013 PRDM2Q13029 1718 aa23.7■■□□□ 1.38
SNX27-204ENST00000458013 AK7Q96M32 723 aa23.7■■□□□ 1.38
SNX27-204ENST00000458013 NASPP49321 788 aaPredicted RBP23.7■■□□□ 1.38
SNX27-204ENST00000458013 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.7■■□□□ 1.38
SNX27-204ENST00000458013 SAFBQ15424 915 aaKnown RBP eCLIP23.7■■□□□ 1.38
SNX27-204ENST00000458013 UACAQ9BZF9 1416 aa23.69■■□□□ 1.38
SNX27-204ENST00000458013 CYB5RLQ6IPT4 315 aa23.69■■□□□ 1.38
SNX27-204ENST00000458013 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
SNX27-204ENST00000458013 UBTFL1P0CB47 393 aaPredicted RBP23.69■■□□□ 1.38
SNX27-204ENST00000458013 NLRP2Q9NX02 1062 aa23.68■■□□□ 1.38
SNX27-204ENST00000458013 BRPF3Q9ULD4 1205 aa23.68■■□□□ 1.38
SNX27-204ENST00000458013 PRPF40AO75400 957 aaKnown RBP23.68■■□□□ 1.38
SNX27-204ENST00000458013 ERC2O15083 957 aa23.67■■□□□ 1.38
SNX27-204ENST00000458013 ROCK1Q13464 1354 aa23.67■■□□□ 1.38
SNX27-204ENST00000458013 CDC45O75419 566 aa23.66■■□□□ 1.38
SNX27-204ENST00000458013 FANCIQ9NVI1 1328 aa23.66■■□□□ 1.38
SNX27-204ENST00000458013 ZNF644Q9H582 1327 aaPredicted RBP23.65■■□□□ 1.38
SNX27-204ENST00000458013 NUCB2P80303 420 aa23.65■■□□□ 1.38
SNX27-204ENST00000458013 ADAMTS8Q9UP79 889 aa23.65■■□□□ 1.38
SNX27-204ENST00000458013 SDF4Q9BRK5 362 aa23.64■■□□□ 1.38
SNX27-204ENST00000458013 TMEM132AQ24JP5 1023 aa23.64■■□□□ 1.38
SNX27-204ENST00000458013 PHF23Q9BUL5 403 aaPredicted RBP23.64■■□□□ 1.37
SNX27-204ENST00000458013 TRIM5Q9C035 493 aa23.64■■□□□ 1.37
SNX27-204ENST00000458013 KIF7Q2M1P5 1343 aa23.64■■□□□ 1.37
SNX27-204ENST00000458013 SIL1Q9H173 461 aa23.63■■□□□ 1.37
SNX27-204ENST00000458013 CNTROBQ8N137 903 aa23.63■■□□□ 1.37
SNX27-204ENST00000458013 RBM42Q9BTD8 480 aaKnown RBP23.62■■□□□ 1.37
SNX27-204ENST00000458013 CCDC39Q9UFE4 941 aa23.62■■□□□ 1.37
SNX27-204ENST00000458013 GNAI1P63096 354 aa23.62■■□□□ 1.37
SNX27-204ENST00000458013 RAPGEF4Q8WZA2 1011 aa23.62■■□□□ 1.37
SNX27-204ENST00000458013 OFD1O75665 1012 aa23.61■■□□□ 1.37
SNX27-204ENST00000458013 MAP7D2Q96T17 732 aa23.61■■□□□ 1.37
SNX27-204ENST00000458013 NINLQ9Y2I6 1382 aa23.61■■□□□ 1.37
SNX27-204ENST00000458013 FIBPO43427 364 aa23.61■■□□□ 1.37
SNX27-204ENST00000458013 TRAK2O60296 914 aa23.61■■□□□ 1.37
SNX27-204ENST00000458013 TSR2Q969E8 191 aaKnown RBP23.6■■□□□ 1.37
SNX27-204ENST00000458013 SPINK5Q9NQ38 1064 aaPredicted RBP23.6■■□□□ 1.37
SNX27-204ENST00000458013 PLCD4Q9BRC7 762 aa23.6■■□□□ 1.37
SNX27-204ENST00000458013 SURF6O75683 361 aaKnown RBP23.6■■□□□ 1.37
SNX27-204ENST00000458013 ATP2B2Q01814 1243 aa23.6■■□□□ 1.37
SNX27-204ENST00000458013 BRMS1Q9HCU9 246 aa23.6■■□□□ 1.37
SNX27-204ENST00000458013 ARGLU1Q9NWB6 273 aaPredicted RBP23.6■■□□□ 1.37
SNX27-204ENST00000458013 NOB1Q9ULX3 412 aaKnown RBP23.59■■□□□ 1.37
SNX27-204ENST00000458013 NEK4P51957 841 aa23.58■■□□□ 1.37
SNX27-204ENST00000458013 PPP1R1BQ9UD71 204 aaPredicted RBP23.58■■□□□ 1.37
SNX27-204ENST00000458013 TSPY26PQ9H489 355 aa23.58■■□□□ 1.37
SNX27-204ENST00000458013 PDZRN3Q9UPQ7 1066 aa23.58■■□□□ 1.37
SNX27-204ENST00000458013 IL27Q8NEV9 243 aa23.58■■□□□ 1.36
SNX27-204ENST00000458013 RSPH4AQ5TD94 716 aa23.57■■□□□ 1.36
SNX27-204ENST00000458013 FAM177A1Q8N128 213 aaPredicted RBP23.57■■□□□ 1.36
SNX27-204ENST00000458013 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.57■■□□□ 1.36
SNX27-204ENST00000458013 NAT10Q9H0A0 1025 aaKnown RBP23.56■■□□□ 1.36
SNX27-204ENST00000458013 SMARCA2P51531 1590 aa23.56■■□□□ 1.36
SNX27-204ENST00000458013 HSP90B2PQ58FF3 399 aa23.56■■□□□ 1.36
SNX27-204ENST00000458013 TTC39AQ5SRH9 613 aa23.56■■□□□ 1.36
SNX27-204ENST00000458013 STRN4Q9NRL3 753 aa23.56■■□□□ 1.36
SNX27-204ENST00000458013 BCAR3O75815 825 aa23.56■■□□□ 1.36
SNX27-204ENST00000458013 MTHFSP49914 203 aa23.56■■□□□ 1.36
SNX27-204ENST00000458013 EXOSC9Q06265 439 aaKnown RBP23.55■■□□□ 1.36
SNX27-204ENST00000458013 CCDC7Q96M83 1385 aa23.55■■□□□ 1.36
SNX27-204ENST00000458013 PIBF1Q8WXW3 757 aa23.54■■□□□ 1.36
SNX27-204ENST00000458013 CALRP27797 417 aaKnown RBP23.54■■□□□ 1.36
SNX27-204ENST00000458013 CDK5RAP3Q96JB5 506 aa23.53■■□□□ 1.36
SNX27-204ENST00000458013 ATF3P18847 181 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms