RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 KIF7Q2M1P5 1343 aa12.39□□□□□ -0.43
CDC42EP3-204ENST00000457889 TMF1P82094 1093 aa12.39□□□□□ -0.43
CDC42EP3-204ENST00000457889 TESK2Q96S53 571 aa12.39□□□□□ -0.43
CDC42EP3-204ENST00000457889 HIRIP3Q9BW71 556 aaPredicted RBP12.39□□□□□ -0.43
CDC42EP3-204ENST00000457889 DIP2AQ14689 1571 aa12.38□□□□□ -0.43
CDC42EP3-204ENST00000457889 DLC1Q96QB1 1528 aa12.37□□□□□ -0.43
CDC42EP3-204ENST00000457889 SSUH2Q9Y2M2 353 aa12.37□□□□□ -0.43
CDC42EP3-204ENST00000457889 ASXL1Q8IXJ9 1541 aa12.37□□□□□ -0.43
CDC42EP3-204ENST00000457889 DDX10Q13206 875 aaKnown RBP12.36□□□□□ -0.43
CDC42EP3-204ENST00000457889 SPDYE1Q8NFV5 336 aaPredicted RBP12.36□□□□□ -0.43
CDC42EP3-204ENST00000457889 SETD1AO15047 1707 aaKnown RBP12.36□□□□□ -0.43
CDC42EP3-204ENST00000457889 NRXN3Q9Y4C0 1643 aa12.36□□□□□ -0.43
CDC42EP3-204ENST00000457889 YTHDC2Q9H6S0 1430 aaKnown RBP12.36□□□□□ -0.43
CDC42EP3-204ENST00000457889 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
CDC42EP3-204ENST00000457889 LRPPRCP42704 1394 aaKnown RBP12.35□□□□□ -0.43
CDC42EP3-204ENST00000457889 TECPR2O15040 1411 aa12.35□□□□□ -0.43
CDC42EP3-204ENST00000457889 ARHGEF28Q8N1W1 1705 aaKnown RBP12.34□□□□□ -0.43
CDC42EP3-204ENST00000457889 ABCC11Q96J66 1382 aa12.34□□□□□ -0.43
CDC42EP3-204ENST00000457889 C11orf95C9JLR9 678 aaPredicted RBP12.34□□□□□ -0.43
CDC42EP3-204ENST00000457889 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
CDC42EP3-204ENST00000457889 PUS7Q96PZ0 661 aaKnown RBP12.34□□□□□ -0.43
CDC42EP3-204ENST00000457889 MED14O60244 1454 aa12.34□□□□□ -0.43
CDC42EP3-204ENST00000457889 TXNDC2Q86VQ3 553 aa12.33□□□□□ -0.44
CDC42EP3-204ENST00000457889 SIRT1Q96EB6 747 aa12.33□□□□□ -0.44
CDC42EP3-204ENST00000457889 KNDC1Q76NI1 1749 aa12.33□□□□□ -0.44
CDC42EP3-204ENST00000457889 PIK3R4Q99570 1358 aa12.32□□□□□ -0.44
CDC42EP3-204ENST00000457889 FAM135BQ49AJ0 1406 aa12.32□□□□□ -0.44
CDC42EP3-204ENST00000457889 ADAMTS13Q76LX8 1427 aa12.32□□□□□ -0.44
CDC42EP3-204ENST00000457889 QRICH2Q9H0J4 1663 aa12.32□□□□□ -0.44
CDC42EP3-204ENST00000457889 DISP3Q9P2K9 1392 aa12.31□□□□□ -0.44
CDC42EP3-204ENST00000457889 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
CDC42EP3-204ENST00000457889 TRAK1Q9UPV9 953 aa12.31□□□□□ -0.44
CDC42EP3-204ENST00000457889 CPS1P31327 1500 aa12.31□□□□□ -0.44
CDC42EP3-204ENST00000457889 LTKP29376 864 aa12.3□□□□□ -0.44
CDC42EP3-204ENST00000457889 TMEM132EQ6IEE7 984 aa12.3□□□□□ -0.44
CDC42EP3-204ENST00000457889 ANKLE2Q86XL3 938 aa12.3□□□□□ -0.44
CDC42EP3-204ENST00000457889 TBX22Q9Y458 520 aa12.3□□□□□ -0.44
CDC42EP3-204ENST00000457889 ANP32CO43423 234 aa12.29□□□□□ -0.44
CDC42EP3-204ENST00000457889 KTN1Q86UP2 1357 aaKnown RBP12.29□□□□□ -0.44
CDC42EP3-204ENST00000457889 NINLQ9Y2I6 1382 aa12.29□□□□□ -0.44
CDC42EP3-204ENST00000457889 EVC2Q86UK5 1308 aa12.28□□□□□ -0.44
CDC42EP3-204ENST00000457889 METP08581 1390 aa12.28□□□□□ -0.44
CDC42EP3-204ENST00000457889 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
CDC42EP3-204ENST00000457889 BCANQ96GW7 911 aa12.27□□□□□ -0.45
CDC42EP3-204ENST00000457889 MIER1Q8N108 512 aa12.26□□□□□ -0.45
CDC42EP3-204ENST00000457889 POGKQ9P215 609 aa12.26□□□□□ -0.45
CDC42EP3-204ENST00000457889 CCER2I3L3R5 266 aa12.25□□□□□ -0.45
CDC42EP3-204ENST00000457889 PRAM1Q96QH2 718 aa12.25□□□□□ -0.45
CDC42EP3-204ENST00000457889 ATAD2Q6PL18 1390 aa12.25□□□□□ -0.45
CDC42EP3-204ENST00000457889 POLR3GLQ9BT43 218 aa12.24□□□□□ -0.45
CDC42EP3-204ENST00000457889 TULP4Q9NRJ4 1543 aa12.24□□□□□ -0.45
CDC42EP3-204ENST00000457889 STK26Q9P289 416 aa12.24□□□□□ -0.45
CDC42EP3-204ENST00000457889 XRN1Q8IZH2 1706 aaKnown RBP12.23□□□□□ -0.45
CDC42EP3-204ENST00000457889 ADGRB2O60241 1585 aa12.23□□□□□ -0.45
CDC42EP3-204ENST00000457889 NPHP4O75161 1426 aaPredicted RBP12.23□□□□□ -0.45
CDC42EP3-204ENST00000457889 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
CDC42EP3-204ENST00000457889 MYOM1P52179 1685 aa12.22□□□□□ -0.45
CDC42EP3-204ENST00000457889 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
CDC42EP3-204ENST00000457889 KDM4FA0A1W2PPD8 638 aa12.21□□□□□ -0.45
CDC42EP3-204ENST00000457889 SLC26A8Q96RN1 970 aa12.2□□□□□ -0.46
CDC42EP3-204ENST00000457889 PRKRIP1Q9H875 184 aaPredicted RBP12.2□□□□□ -0.46
CDC42EP3-204ENST00000457889 PTPRUQ92729 1446 aa12.2□□□□□ -0.46
CDC42EP3-204ENST00000457889 ROBO2Q9HCK4 1378 aa12.19□□□□□ -0.46
CDC42EP3-204ENST00000457889 RALBP1Q15311 655 aa12.19□□□□□ -0.46
CDC42EP3-204ENST00000457889 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
CDC42EP3-204ENST00000457889 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
CDC42EP3-204ENST00000457889 PANK3Q9H999 370 aa12.18□□□□□ -0.46
CDC42EP3-204ENST00000457889 AMOTL2Q9Y2J4 779 aa12.18□□□□□ -0.46
CDC42EP3-204ENST00000457889 NWD1Q149M9 1564 aa12.18□□□□□ -0.46
CDC42EP3-204ENST00000457889 ANKRD36BQ8N2N9 1353 aa12.18□□□□□ -0.46
CDC42EP3-204ENST00000457889 MINK1Q8N4C8 1332 aaPredicted RBP12.17□□□□□ -0.46
CDC42EP3-204ENST00000457889 LMTK3Q96Q04 1460 aa12.17□□□□□ -0.46
CDC42EP3-204ENST00000457889 CHD2O14647 1828 aaKnown RBP12.17□□□□□ -0.46
CDC42EP3-204ENST00000457889 KNSTRNQ9Y448 316 aa12.17□□□□□ -0.46
CDC42EP3-204ENST00000457889 USP32Q8NFA0 1604 aa12.17□□□□□ -0.46
CDC42EP3-204ENST00000457889 PLEKHH1Q9ULM0 1364 aa12.17□□□□□ -0.46
CDC42EP3-204ENST00000457889 NKTRP30414 1462 aaKnown RBP12.16□□□□□ -0.46
CDC42EP3-204ENST00000457889 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
CDC42EP3-204ENST00000457889 SRPK2P78362 688 aaKnown RBP12.16□□□□□ -0.46
CDC42EP3-204ENST00000457889 PARD3Q8TEW0 1356 aa12.16□□□□□ -0.46
CDC42EP3-204ENST00000457889 ATP7BP35670 1465 aa12.15□□□□□ -0.46
CDC42EP3-204ENST00000457889 SAFB2Q14151 953 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDC42EP3-204ENST00000457889 WAPLQ7Z5K2 1190 aa12.15□□□□□ -0.46
CDC42EP3-204ENST00000457889 CDK19Q9BWU1 502 aa12.15□□□□□ -0.46
CDC42EP3-204ENST00000457889 TERF2IPQ9NYB0 399 aa12.15□□□□□ -0.46
CDC42EP3-204ENST00000457889 NSD2O96028 1365 aa12.15□□□□□ -0.46
CDC42EP3-204ENST00000457889 GABBR2O75899 941 aa12.14□□□□□ -0.47
CDC42EP3-204ENST00000457889 KCNA6P17658 529 aa12.14□□□□□ -0.47
CDC42EP3-204ENST00000457889 ANKARQ7Z5J8 1434 aa12.13□□□□□ -0.47
CDC42EP3-204ENST00000457889 CDC42BPGQ6DT37 1551 aa12.13□□□□□ -0.47
CDC42EP3-204ENST00000457889 MYBBP1AQ9BQG0 1328 aaKnown RBP12.12□□□□□ -0.47
CDC42EP3-204ENST00000457889 NCOA3Q9Y6Q9 1424 aa12.12□□□□□ -0.47
CDC42EP3-204ENST00000457889 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.12□□□□□ -0.47
CDC42EP3-204ENST00000457889 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
CDC42EP3-204ENST00000457889 TMC1Q8TDI8 760 aa12.12□□□□□ -0.47
CDC42EP3-204ENST00000457889 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
CDC42EP3-204ENST00000457889 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
CDC42EP3-204ENST00000457889 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
CDC42EP3-204ENST00000457889 BRD4O60885 1362 aaPredicted RBP12.11□□□□□ -0.47
CDC42EP3-204ENST00000457889 HDGFL2Q7Z4V5 671 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms