RNA–Protein interactions for RNA: ENST00000455302.5

LSMEM1-203, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 2

Gene LSMEM1, Length 819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-203ENST00000455302 TSR1Q2NL82 804 aaKnown RBP11.15□□□□□ -0.62
LSMEM1-203ENST00000455302 FER1L4A9Z1Z3 1794 aa11.14□□□□□ -0.63
LSMEM1-203ENST00000455302 RANGAP1P46060 587 aaPredicted RBP11.14□□□□□ -0.63
LSMEM1-203ENST00000455302 FOSBP53539 338 aa11.14□□□□□ -0.63
LSMEM1-203ENST00000455302 MDM2Q00987 491 aaPredicted RBP11.14□□□□□ -0.63
LSMEM1-203ENST00000455302 TMUB1Q9BVT8 246 aa11.14□□□□□ -0.63
LSMEM1-203ENST00000455302 SIGLEC1Q9BZZ2 1709 aa11.14□□□□□ -0.63
LSMEM1-203ENST00000455302 ARHGEF12Q9NZN5 1544 aa11.14□□□□□ -0.63
LSMEM1-203ENST00000455302 PREX1Q8TCU6 1659 aa11.14□□□□□ -0.63
LSMEM1-203ENST00000455302 SCAPERQ9BY12 1400 aa11.13□□□□□ -0.63
LSMEM1-203ENST00000455302 RIMBP2O15034 1052 aa11.13□□□□□ -0.63
LSMEM1-203ENST00000455302 SSTR3P32745 418 aaPredicted RBP11.13□□□□□ -0.63
LSMEM1-203ENST00000455302 DOK7Q18PE1 504 aa11.13□□□□□ -0.63
LSMEM1-203ENST00000455302 C6orf132Q5T0Z8 1188 aa11.13□□□□□ -0.63
LSMEM1-203ENST00000455302 ZDHHC16Q969W1 377 aa11.13□□□□□ -0.63
LSMEM1-203ENST00000455302 HECW1Q76N89 1606 aa11.13□□□□□ -0.63
LSMEM1-203ENST00000455302 ATP10AO60312 1499 aa11.12□□□□□ -0.63
LSMEM1-203ENST00000455302 PTPRTO14522 1441 aa11.12□□□□□ -0.63
LSMEM1-203ENST00000455302 C9orf84Q5VXU9 1444 aa11.12□□□□□ -0.63
LSMEM1-203ENST00000455302 SH3D19Q5HYK7 790 aa11.12□□□□□ -0.63
LSMEM1-203ENST00000455302 RBM27Q9P2N5 1060 aaKnown RBP11.12□□□□□ -0.63
LSMEM1-203ENST00000455302 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.12□□□□□ -0.63
LSMEM1-203ENST00000455302 SAMD9Q5K651 1589 aa11.11□□□□□ -0.63
LSMEM1-203ENST00000455302 ZNF454Q8N9F8 522 aa11.11□□□□□ -0.63
LSMEM1-203ENST00000455302 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
LSMEM1-203ENST00000455302 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
LSMEM1-203ENST00000455302 MYT1LQ9UL68 1186 aa11.1□□□□□ -0.63
LSMEM1-203ENST00000455302 METTL3Q86U44 580 aaKnown RBP11.09□□□□□ -0.63
LSMEM1-203ENST00000455302 STRCQ7RTU9 1775 aa11.08□□□□□ -0.64
LSMEM1-203ENST00000455302 IQSEC2Q5JU85 1478 aa11.08□□□□□ -0.64
LSMEM1-203ENST00000455302 SKIV2LQ15477 1246 aaKnown RBP11.08□□□□□ -0.64
LSMEM1-203ENST00000455302 ESF1Q9H501 851 aaKnown RBP11.08□□□□□ -0.64
LSMEM1-203ENST00000455302 UBAP1LF5GYI3 381 aa11.07□□□□□ -0.64
LSMEM1-203ENST00000455302 PADI6Q6TGC4 694 aa11.07□□□□□ -0.64
LSMEM1-203ENST00000455302 PHOX2BQ99453 314 aa11.07□□□□□ -0.64
LSMEM1-203ENST00000455302 BEGAINQ9BUH8 593 aa11.07□□□□□ -0.64
LSMEM1-203ENST00000455302 ADGRG1Q9Y653 693 aa11.07□□□□□ -0.64
LSMEM1-203ENST00000455302 PLCH2O75038 1416 aa11.07□□□□□ -0.64
LSMEM1-203ENST00000455302 LTBP4Q8N2S1 1624 aa11.06□□□□□ -0.64
LSMEM1-203ENST00000455302 EFCAB2Q5VUJ9 269 aa11.06□□□□□ -0.64
LSMEM1-203ENST00000455302 RBM46Q8TBY0 533 aaKnown RBP11.06□□□□□ -0.64
LSMEM1-203ENST00000455302 PXYLP1Q8TE99 480 aa11.06□□□□□ -0.64
LSMEM1-203ENST00000455302 FAM217BQ9NTX9 383 aaPredicted RBP11.06□□□□□ -0.64
LSMEM1-203ENST00000455302 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
LSMEM1-203ENST00000455302 DIXDC1Q155Q3 683 aa11.05□□□□□ -0.64
LSMEM1-203ENST00000455302 TTC13Q8NBP0 860 aa11.05□□□□□ -0.64
LSMEM1-203ENST00000455302 ATP1B4Q9UN42 357 aaPredicted RBP11.05□□□□□ -0.64
LSMEM1-203ENST00000455302 NUDT7P0C024 238 aa11.04□□□□□ -0.64
LSMEM1-203ENST00000455302 PRSS12P56730 875 aa11.04□□□□□ -0.64
LSMEM1-203ENST00000455302 NCOA1Q15788 1441 aa11.03□□□□□ -0.64
LSMEM1-203ENST00000455302 TRAPPC8Q9Y2L5 1435 aa11.03□□□□□ -0.64
LSMEM1-203ENST00000455302 ARSIQ5FYB1 569 aa11.03□□□□□ -0.64
LSMEM1-203ENST00000455302 ZNF710Q8N1W2 664 aa11.03□□□□□ -0.64
LSMEM1-203ENST00000455302 ZNF518AQ6AHZ1 1483 aa11.03□□□□□ -0.64
LSMEM1-203ENST00000455302 FAM161AQ3B820 660 aa11.02□□□□□ -0.65
LSMEM1-203ENST00000455302 AFAP1Q8N556 730 aa11.02□□□□□ -0.65
LSMEM1-203ENST00000455302 CDK13Q14004 1512 aaKnown RBP11.02□□□□□ -0.65
LSMEM1-203ENST00000455302 PPP4R3BQ5MIZ7 849 aa11.01□□□□□ -0.65
LSMEM1-203ENST00000455302 LCE2DQ5TA82 110 aaPredicted RBP11.01□□□□□ -0.65
LSMEM1-203ENST00000455302 CDCA7LQ96GN5 454 aa11.01□□□□□ -0.65
LSMEM1-203ENST00000455302 ADAM33Q9BZ11 813 aa11.01□□□□□ -0.65
LSMEM1-203ENST00000455302 ZNF335Q9H4Z2 1342 aaPredicted RBP11.01□□□□□ -0.65
LSMEM1-203ENST00000455302 ONECUT3O60422 494 aaPredicted RBP11□□□□□ -0.65
LSMEM1-203ENST00000455302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.99□□□□□ -0.65
LSMEM1-203ENST00000455302 HOXB3P14651 431 aaPredicted RBP10.99□□□□□ -0.65
LSMEM1-203ENST00000455302 GPR153Q6NV75 609 aa10.99□□□□□ -0.65
LSMEM1-203ENST00000455302 A6NJR5 290 aa10.98□□□□□ -0.65
LSMEM1-203ENST00000455302 CDK11AQ9UQ88 783 aaPredicted RBP10.98□□□□□ -0.65
LSMEM1-203ENST00000455302 ARHGAP5Q13017 1502 aa10.98□□□□□ -0.65
LSMEM1-203ENST00000455302 UBTFP17480 764 aaKnown RBP10.97□□□□□ -0.65
LSMEM1-203ENST00000455302 KHSRPQ92945 711 aaKnown RBP eCLIP10.97□□□□□ -0.65
LSMEM1-203ENST00000455302 CNTLNQ9NXG0 1405 aa10.97□□□□□ -0.65
LSMEM1-203ENST00000455302 KDM5CP41229 1560 aa10.97□□□□□ -0.65
LSMEM1-203ENST00000455302 DIP2CQ9Y2E4 1556 aa10.97□□□□□ -0.65
LSMEM1-203ENST00000455302 CAMSAP1Q5T5Y3 1602 aa10.97□□□□□ -0.65
LSMEM1-203ENST00000455302 C3P01024 1663 aa10.97□□□□□ -0.65
LSMEM1-203ENST00000455302 POLR3EQ9NVU0 708 aa10.96□□□□□ -0.65
LSMEM1-203ENST00000455302 REREQ9P2R6 1566 aa10.95□□□□□ -0.66
LSMEM1-203ENST00000455302 PTPREP23469 700 aa10.95□□□□□ -0.66
LSMEM1-203ENST00000455302 HSPA1LP34931 641 aa10.95□□□□□ -0.66
LSMEM1-203ENST00000455302 PIP4K2BP78356 416 aa10.95□□□□□ -0.66
LSMEM1-203ENST00000455302 BCL2L12Q9HB09 334 aa10.95□□□□□ -0.66
LSMEM1-203ENST00000455302 SETD1BQ9UPS6 1966 aaKnown RBP10.95□□□□□ -0.66
LSMEM1-203ENST00000455302 AGLP35573 1532 aa10.94□□□□□ -0.66
LSMEM1-203ENST00000455302 MLH3Q9UHC1 1453 aa10.94□□□□□ -0.66
LSMEM1-203ENST00000455302 NPATQ14207 1427 aa10.94□□□□□ -0.66
LSMEM1-203ENST00000455302 SNPHO15079 494 aa10.94□□□□□ -0.66
LSMEM1-203ENST00000455302 MYSM1Q5VVJ2 828 aa10.94□□□□□ -0.66
LSMEM1-203ENST00000455302 SULF1Q8IWU6 871 aa10.94□□□□□ -0.66
LSMEM1-203ENST00000455302 NLRP7Q8WX94 980 aa10.94□□□□□ -0.66
LSMEM1-203ENST00000455302 LHX6Q9UPM6 363 aa10.94□□□□□ -0.66
LSMEM1-203ENST00000455302 MED1Q15648 1581 aaPredicted RBP10.94□□□□□ -0.66
LSMEM1-203ENST00000455302 MYO5CQ9NQX4 1742 aa10.93□□□□□ -0.66
LSMEM1-203ENST00000455302 CLK2P49760 499 aaKnown RBP10.93□□□□□ -0.66
LSMEM1-203ENST00000455302 PROCA1Q8NCQ7 364 aaPredicted RBP10.93□□□□□ -0.66
LSMEM1-203ENST00000455302 TBC1D2Q9BYX2 928 aa10.93□□□□□ -0.66
LSMEM1-203ENST00000455302 ABCA6Q8N139 1617 aa10.93□□□□□ -0.66
LSMEM1-203ENST00000455302 CLIP1P30622 1438 aa10.92□□□□□ -0.66
LSMEM1-203ENST00000455302 KIF14Q15058 1648 aa10.92□□□□□ -0.66
LSMEM1-203ENST00000455302 RCCD1A6NED2 376 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms