RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 PTPRGP23470 1445 aa12.15□□□□□ -0.46
LINC01940-201ENST00000455228 DUSP27Q5VZP5 1158 aa12.15□□□□□ -0.46
LINC01940-201ENST00000455228 TULP2O00295 520 aa12.15□□□□□ -0.46
LINC01940-201ENST00000455228 DYNC1I1O14576 645 aa12.15□□□□□ -0.46
LINC01940-201ENST00000455228 ZMYM4Q5VZL5 1548 aa12.15□□□□□ -0.46
LINC01940-201ENST00000455228 VGLL3A8MV65 326 aa12.14□□□□□ -0.47
LINC01940-201ENST00000455228 PUS7Q96PZ0 661 aaKnown RBP12.14□□□□□ -0.47
LINC01940-201ENST00000455228 PPP2R1AP30153 589 aa12.14□□□□□ -0.47
LINC01940-201ENST00000455228 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
LINC01940-201ENST00000455228 C8orf34Q49A92 452 aa12.14□□□□□ -0.47
LINC01940-201ENST00000455228 GPRASP1Q5JY77 1395 aa12.14□□□□□ -0.47
LINC01940-201ENST00000455228 PTMSP20962 102 aa12.13□□□□□ -0.47
LINC01940-201ENST00000455228 CDC42BPAQ5VT25 1732 aa12.13□□□□□ -0.47
LINC01940-201ENST00000455228 FRAT2O75474 233 aaPredicted RBP12.13□□□□□ -0.47
LINC01940-201ENST00000455228 KIAA1211Q6ZU35 1233 aa12.13□□□□□ -0.47
LINC01940-201ENST00000455228 TRPM1Q7Z4N2 1603 aa12.13□□□□□ -0.47
LINC01940-201ENST00000455228 CCDC146Q8IYE0 955 aa12.13□□□□□ -0.47
LINC01940-201ENST00000455228 PLEKHH1Q9ULM0 1364 aa12.12□□□□□ -0.47
LINC01940-201ENST00000455228 CDCA8Q53HL2 280 aa12.12□□□□□ -0.47
LINC01940-201ENST00000455228 ATP10BO94823 1461 aa12.12□□□□□ -0.47
LINC01940-201ENST00000455228 ABCC10Q5T3U5 1492 aa12.12□□□□□ -0.47
LINC01940-201ENST00000455228 CCDC141Q6ZP82 1450 aa12.12□□□□□ -0.47
LINC01940-201ENST00000455228 IRX5P78411 483 aaPredicted RBP12.12□□□□□ -0.47
LINC01940-201ENST00000455228 A2MP01023 1474 aa12.11□□□□□ -0.47
LINC01940-201ENST00000455228 SETQ01105 290 aaPredicted RBP12.11□□□□□ -0.47
LINC01940-201ENST00000455228 EGFL6Q8IUX8 553 aa12.1□□□□□ -0.47
LINC01940-201ENST00000455228 RAD50Q92878 1312 aa12.1□□□□□ -0.47
LINC01940-201ENST00000455228 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.1□□□□□ -0.47
LINC01940-201ENST00000455228 EIF4G3O43432 1585 aaKnown RBP12.09□□□□□ -0.47
LINC01940-201ENST00000455228 SLFN5Q08AF3 891 aa12.09□□□□□ -0.47
LINC01940-201ENST00000455228 APAF1O14727 1248 aa12.09□□□□□ -0.47
LINC01940-201ENST00000455228 MRE11P49959 708 aa12.09□□□□□ -0.47
LINC01940-201ENST00000455228 SYNJ2O15056 1496 aa12.08□□□□□ -0.48
LINC01940-201ENST00000455228 TMEM132AQ24JP5 1023 aa12.08□□□□□ -0.48
LINC01940-201ENST00000455228 PRDM15P57071 1507 aaPredicted RBP12.08□□□□□ -0.48
LINC01940-201ENST00000455228 TMED8Q6PL24 325 aaPredicted RBP12.08□□□□□ -0.48
LINC01940-201ENST00000455228 BCAR3O75815 825 aa12.07□□□□□ -0.48
LINC01940-201ENST00000455228 BECN1Q14457 450 aa12.07□□□□□ -0.48
LINC01940-201ENST00000455228 NPM1P06748 294 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC01940-201ENST00000455228 POGKQ9P215 609 aa12.07□□□□□ -0.48
LINC01940-201ENST00000455228 ARHGEF5Q12774 1597 aa12.07□□□□□ -0.48
LINC01940-201ENST00000455228 PLA2R1Q13018 1463 aa12.07□□□□□ -0.48
LINC01940-201ENST00000455228 PLCD4Q9BRC7 762 aa12.07□□□□□ -0.48
LINC01940-201ENST00000455228 MYCNP04198 464 aaPredicted RBP12.06□□□□□ -0.48
LINC01940-201ENST00000455228 FAM43BQ6ZT52 329 aaPredicted RBP12.06□□□□□ -0.48
LINC01940-201ENST00000455228 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
LINC01940-201ENST00000455228 EIF3AQ14152 1382 aaKnown RBP12.06□□□□□ -0.48
LINC01940-201ENST00000455228 IBTKQ9P2D0 1353 aaPredicted RBP12.06□□□□□ -0.48
LINC01940-201ENST00000455228 ZNF521Q96K83 1311 aa12.06□□□□□ -0.48
LINC01940-201ENST00000455228 E9PSI1 815 aa12.06□□□□□ -0.48
LINC01940-201ENST00000455228 EIF2AK4Q9P2K8 1649 aaKnown RBP12.06□□□□□ -0.48
LINC01940-201ENST00000455228 HS1BP3Q53T59 392 aa12.05□□□□□ -0.48
LINC01940-201ENST00000455228 EFCC1Q9HA90 598 aa12.05□□□□□ -0.48
LINC01940-201ENST00000455228 SLKQ9H2G2 1235 aaPredicted RBP12.05□□□□□ -0.48
LINC01940-201ENST00000455228 UPF2Q9HAU5 1272 aaKnown RBP12.05□□□□□ -0.48
LINC01940-201ENST00000455228 NUP160Q12769 1436 aa12.04□□□□□ -0.48
LINC01940-201ENST00000455228 ABCA8O94911 1581 aa12.04□□□□□ -0.48
LINC01940-201ENST00000455228 MAGI2Q86UL8 1455 aa12.04□□□□□ -0.48
LINC01940-201ENST00000455228 PPP1R9BQ96SB3 815 aa12.04□□□□□ -0.48
LINC01940-201ENST00000455228 TSPYL1Q9H0U9 437 aa12.04□□□□□ -0.48
LINC01940-201ENST00000455228 CGNL1Q0VF96 1302 aa12.04□□□□□ -0.48
LINC01940-201ENST00000455228 ZNF500O60304 480 aaPredicted RBP12.04□□□□□ -0.48
LINC01940-201ENST00000455228 NINLQ9Y2I6 1382 aa12.04□□□□□ -0.48
LINC01940-201ENST00000455228 NKTRP30414 1462 aaKnown RBP12.04□□□□□ -0.48
LINC01940-201ENST00000455228 SPINK5Q9NQ38 1064 aaPredicted RBP12.03□□□□□ -0.48
LINC01940-201ENST00000455228 PRDM10Q9NQV6 1147 aa12.03□□□□□ -0.48
LINC01940-201ENST00000455228 MAPK8IP3Q9UPT6 1336 aa12.03□□□□□ -0.48
LINC01940-201ENST00000455228 IGHDP01880 384 aa12.03□□□□□ -0.48
LINC01940-201ENST00000455228 COG6Q9Y2V7 657 aa12.03□□□□□ -0.48
LINC01940-201ENST00000455228 ARHGAP5Q13017 1502 aa12.02□□□□□ -0.48
LINC01940-201ENST00000455228 LAMC1P11047 1609 aa12.02□□□□□ -0.48
LINC01940-201ENST00000455228 IGSF3O75054 1194 aa12.02□□□□□ -0.48
LINC01940-201ENST00000455228 DNTTIP2Q5QJE6 756 aaKnown RBP12.02□□□□□ -0.48
LINC01940-201ENST00000455228 WDR7Q9Y4E6 1490 aa12.02□□□□□ -0.48
LINC01940-201ENST00000455228 SAMD9LQ8IVG5 1584 aa12.02□□□□□ -0.49
LINC01940-201ENST00000455228 ERCC6Q03468 1493 aa12.02□□□□□ -0.49
LINC01940-201ENST00000455228 SYCP2Q9BX26 1530 aa12.02□□□□□ -0.49
LINC01940-201ENST00000455228 CLUAP1Q96AJ1 413 aa12.02□□□□□ -0.49
LINC01940-201ENST00000455228 GTF2F1P35269 517 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC01940-201ENST00000455228 NEUROD2Q15784 382 aa12.01□□□□□ -0.49
LINC01940-201ENST00000455228 PANK1Q8TE04 598 aa12.01□□□□□ -0.49
LINC01940-201ENST00000455228 PDE3AQ14432 1141 aa12.01□□□□□ -0.49
LINC01940-201ENST00000455228 NGEFQ8N5V2 710 aa12.01□□□□□ -0.49
LINC01940-201ENST00000455228 TRMT2AQ8IZ69 625 aaKnown RBP12□□□□□ -0.49
LINC01940-201ENST00000455228 ANTXR1Q9H6X2 564 aa12□□□□□ -0.49
LINC01940-201ENST00000455228 ASXL1Q8IXJ9 1541 aa12□□□□□ -0.49
LINC01940-201ENST00000455228 PIK3C2GO75747 1445 aa12□□□□□ -0.49
LINC01940-201ENST00000455228 NBPF11Q86T75 865 aa12□□□□□ -0.49
LINC01940-201ENST00000455228 MYO5CQ9NQX4 1742 aa11.99□□□□□ -0.49
LINC01940-201ENST00000455228 SEC24BO95487 1268 aa11.98□□□□□ -0.49
LINC01940-201ENST00000455228 PANK2Q9BZ23 570 aa11.98□□□□□ -0.49
LINC01940-201ENST00000455228 RAI14Q9P0K7 980 aa11.98□□□□□ -0.49
LINC01940-201ENST00000455228 ARHGAP31Q2M1Z3 1444 aa11.98□□□□□ -0.49
LINC01940-201ENST00000455228 UNC13BO14795 1591 aa11.98□□□□□ -0.49
LINC01940-201ENST00000455228 CC2D2BQ6DHV5 1058 aa11.98□□□□□ -0.49
LINC01940-201ENST00000455228 ZSCAN30Q86W11 494 aa11.97□□□□□ -0.49
LINC01940-201ENST00000455228 PMFBP1Q8TBY8 1022 aa11.97□□□□□ -0.49
LINC01940-201ENST00000455228 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
LINC01940-201ENST00000455228 CDC42BPBQ9Y5S2 1711 aa11.97□□□□□ -0.49
LINC01940-201ENST00000455228 SCAF11Q99590 1463 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms