RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 KNSTRNQ9Y448 316 aa9.29□□□□□ -0.92
ECHDC1-210ENST00000454859 TULP4Q9NRJ4 1543 aa9.29□□□□□ -0.92
ECHDC1-210ENST00000454859 TBX22Q9Y458 520 aa9.28□□□□□ -0.92
ECHDC1-210ENST00000454859 PANK3Q9H999 370 aa9.28□□□□□ -0.92
ECHDC1-210ENST00000454859 ANKRD26Q9UPS8 1709 aa9.27□□□□□ -0.92
ECHDC1-210ENST00000454859 PTCH1Q13635 1447 aa9.27□□□□□ -0.92
ECHDC1-210ENST00000454859 ANKRD36BQ8N2N9 1353 aa9.27□□□□□ -0.93
ECHDC1-210ENST00000454859 ADAMTS13Q76LX8 1427 aa9.27□□□□□ -0.93
ECHDC1-210ENST00000454859 TRAK1Q9UPV9 953 aa9.27□□□□□ -0.93
ECHDC1-210ENST00000454859 ATP7BP35670 1465 aa9.27□□□□□ -0.93
ECHDC1-210ENST00000454859 XRN1Q8IZH2 1706 aaKnown RBP9.25□□□□□ -0.93
ECHDC1-210ENST00000454859 MRS2Q9HD23 443 aa9.25□□□□□ -0.93
ECHDC1-210ENST00000454859 CGNL1Q0VF96 1302 aa9.25□□□□□ -0.93
ECHDC1-210ENST00000454859 AMER1Q5JTC6 1135 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-210ENST00000454859 TMEM132EQ6IEE7 984 aa9.25□□□□□ -0.93
ECHDC1-210ENST00000454859 NGEFQ8N5V2 710 aa9.25□□□□□ -0.93
ECHDC1-210ENST00000454859 POLR3GLQ9BT43 218 aa9.25□□□□□ -0.93
ECHDC1-210ENST00000454859 POGKQ9P215 609 aa9.25□□□□□ -0.93
ECHDC1-210ENST00000454859 ITSN1Q15811 1721 aa9.24□□□□□ -0.93
ECHDC1-210ENST00000454859 TMC1Q8TDI8 760 aa9.24□□□□□ -0.93
ECHDC1-210ENST00000454859 TERF2IPQ9NYB0 399 aa9.24□□□□□ -0.93
ECHDC1-210ENST00000454859 TXNDC2Q86VQ3 553 aa9.23□□□□□ -0.93
ECHDC1-210ENST00000454859 CHD2O14647 1828 aaKnown RBP9.23□□□□□ -0.93
ECHDC1-210ENST00000454859 PNISRQ8TF01 805 aaKnown RBP9.22□□□□□ -0.93
ECHDC1-210ENST00000454859 PRAM1Q96QH2 718 aa9.22□□□□□ -0.93
ECHDC1-210ENST00000454859 ZBED9Q6R2W3 1325 aa9.22□□□□□ -0.93
ECHDC1-210ENST00000454859 KIF20BQ96Q89 1820 aa9.22□□□□□ -0.93
ECHDC1-210ENST00000454859 AKAP12Q02952 1782 aa9.22□□□□□ -0.93
ECHDC1-210ENST00000454859 METP08581 1390 aa9.21□□□□□ -0.93
ECHDC1-210ENST00000454859 ANKLE2Q86XL3 938 aa9.21□□□□□ -0.93
ECHDC1-210ENST00000454859 TOPAZ1Q8N9V7 1692 aa9.21□□□□□ -0.93
ECHDC1-210ENST00000454859 CDC42BPGQ6DT37 1551 aa9.21□□□□□ -0.93
ECHDC1-210ENST00000454859 MON2Q7Z3U7 1717 aa9.21□□□□□ -0.94
ECHDC1-210ENST00000454859 NCBP3Q53F19 620 aaKnown RBP9.21□□□□□ -0.94
ECHDC1-210ENST00000454859 LTKP29376 864 aa9.2□□□□□ -0.94
ECHDC1-210ENST00000454859 HDGFL2Q7Z4V5 671 aaPredicted RBP9.2□□□□□ -0.94
ECHDC1-210ENST00000454859 ANKARQ7Z5J8 1434 aa9.2□□□□□ -0.94
ECHDC1-210ENST00000454859 POLR3AO14802 1390 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-210ENST00000454859 SCAF1Q9H7N4 1312 aaKnown RBP9.19□□□□□ -0.94
ECHDC1-210ENST00000454859 WASLO00401 505 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-210ENST00000454859 YTHDC1Q96MU7 727 aaKnown RBP9.19□□□□□ -0.94
ECHDC1-210ENST00000454859 ZNF692Q9BU19 519 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-210ENST00000454859 NWD1Q149M9 1564 aa9.19□□□□□ -0.94
ECHDC1-210ENST00000454859 CEBPAP49715 358 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-210ENST00000454859 NUTM2DQ5VT03 806 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-210ENST00000454859 BLMP54132 1417 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-210ENST00000454859 NSD3Q9BZ95 1437 aa9.19□□□□□ -0.94
ECHDC1-210ENST00000454859 CPSF1Q10570 1443 aaKnown RBP9.18□□□□□ -0.94
ECHDC1-210ENST00000454859 EDC4Q6P2E9 1401 aaKnown RBP9.18□□□□□ -0.94
ECHDC1-210ENST00000454859 PDE3BQ13370 1112 aa9.18□□□□□ -0.94
ECHDC1-210ENST00000454859 CDK19Q9BWU1 502 aa9.18□□□□□ -0.94
ECHDC1-210ENST00000454859 STK26Q9P289 416 aa9.18□□□□□ -0.94
ECHDC1-210ENST00000454859 PPP2R1AP30153 589 aa9.17□□□□□ -0.94
ECHDC1-210ENST00000454859 SRPK2P78362 688 aaKnown RBP9.17□□□□□ -0.94
ECHDC1-210ENST00000454859 CARD14Q9BXL6 1004 aa9.17□□□□□ -0.94
ECHDC1-210ENST00000454859 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.17□□□□□ -0.94
ECHDC1-210ENST00000454859 CD163L1Q9NR16 1453 aa9.17□□□□□ -0.94
ECHDC1-210ENST00000454859 NCOA3Q9Y6Q9 1424 aa9.17□□□□□ -0.94
ECHDC1-210ENST00000454859 LRRC7Q96NW7 1537 aa9.17□□□□□ -0.94
ECHDC1-210ENST00000454859 CCDC61Q9Y6R9 512 aa9.16□□□□□ -0.94
ECHDC1-210ENST00000454859 USP54Q70EL1 1684 aa9.16□□□□□ -0.94
ECHDC1-210ENST00000454859 ROBO2Q9HCK4 1378 aa9.16□□□□□ -0.94
ECHDC1-210ENST00000454859 BCANQ96GW7 911 aa9.16□□□□□ -0.94
ECHDC1-210ENST00000454859 FMN2Q9NZ56 1722 aa9.16□□□□□ -0.94
ECHDC1-210ENST00000454859 NPHP4O75161 1426 aaPredicted RBP9.16□□□□□ -0.94
ECHDC1-210ENST00000454859 NKTRP30414 1462 aaKnown RBP9.15□□□□□ -0.94
ECHDC1-210ENST00000454859 A0A1W2PP64 1363 aa9.15□□□□□ -0.94
ECHDC1-210ENST00000454859 PLEKHG3A1L390 1219 aa9.15□□□□□ -0.94
ECHDC1-210ENST00000454859 HNRNPUQ00839 825 aaKnown RBP eCLIP9.15□□□□□ -0.94
ECHDC1-210ENST00000454859 SLC12A5Q9H2X9 1139 aa9.15□□□□□ -0.94
ECHDC1-210ENST00000454859 PTPRUQ92729 1446 aa9.15□□□□□ -0.94
ECHDC1-210ENST00000454859 MINK1Q8N4C8 1332 aaPredicted RBP9.15□□□□□ -0.94
ECHDC1-210ENST00000454859 ERICH6BQ5W0A0 696 aa9.15□□□□□ -0.95
ECHDC1-210ENST00000454859 CC2D1BQ5T0F9 858 aaKnown RBP9.14□□□□□ -0.95
ECHDC1-210ENST00000454859 CFAP53Q96M91 514 aa9.14□□□□□ -0.95
ECHDC1-210ENST00000454859 NRKQ7Z2Y5 1582 aa9.14□□□□□ -0.95
ECHDC1-210ENST00000454859 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
ECHDC1-210ENST00000454859 SMG6Q86US8 1419 aaKnown RBP9.14□□□□□ -0.95
ECHDC1-210ENST00000454859 MORC1Q86VD1 984 aa9.14□□□□□ -0.95
ECHDC1-210ENST00000454859 CABP2Q9NPB3 220 aa9.14□□□□□ -0.95
ECHDC1-210ENST00000454859 AMOTL2Q9Y2J4 779 aa9.14□□□□□ -0.95
ECHDC1-210ENST00000454859 AATKQ6ZMQ8 1374 aa9.13□□□□□ -0.95
ECHDC1-210ENST00000454859 CCDC184Q52MB2 194 aa9.13□□□□□ -0.95
ECHDC1-210ENST00000454859 PLEKHH1Q9ULM0 1364 aa9.13□□□□□ -0.95
ECHDC1-210ENST00000454859 WDR43Q15061 677 aaKnown RBP eCLIP9.13□□□□□ -0.95
ECHDC1-210ENST00000454859 FAM9BQ8IZU0 186 aa9.13□□□□□ -0.95
ECHDC1-210ENST00000454859 NUDT16Q96DE0 195 aaKnown RBP9.13□□□□□ -0.95
ECHDC1-210ENST00000454859 WAPLQ7Z5K2 1190 aa9.12□□□□□ -0.95
ECHDC1-210ENST00000454859 PNNQ9H307 717 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-210ENST00000454859 TTC21AQ8NDW8 1320 aa9.12□□□□□ -0.95
ECHDC1-210ENST00000454859 SHPRHQ149N8 1683 aa9.12□□□□□ -0.95
ECHDC1-210ENST00000454859 NALCNQ8IZF0 1738 aa9.12□□□□□ -0.95
ECHDC1-210ENST00000454859 KCNA6P17658 529 aa9.11□□□□□ -0.95
ECHDC1-210ENST00000454859 PNPLA6Q8IY17 1366 aa9.1□□□□□ -0.95
ECHDC1-210ENST00000454859 DCCP43146 1447 aa9.1□□□□□ -0.95
ECHDC1-210ENST00000454859 ADGRL3Q9HAR2 1447 aa9.1□□□□□ -0.95
ECHDC1-210ENST00000454859 CABP1Q9NZU7 370 aa9.1□□□□□ -0.95
ECHDC1-210ENST00000454859 KIF1AQ12756 1690 aa9.1□□□□□ -0.95
ECHDC1-210ENST00000454859 KIF24Q5T7B8 1368 aa9.09□□□□□ -0.95
ECHDC1-210ENST00000454859 SSH2Q76I76 1423 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms