RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 KIF6Q6ZMV9 814 aa4.41□□□□□ -1.7
ATM-203ENST00000452508 CCAR1Q8IX12 1150 aaKnown RBP4.41□□□□□ -1.7
ATM-203ENST00000452508 UHRF1BP1Q6BDS2 1440 aa4.41□□□□□ -1.7
ATM-203ENST00000452508 ERBINQ96RT1 1412 aa4.41□□□□□ -1.7
ATM-203ENST00000452508 ABCC2Q92887 1545 aa4.41□□□□□ -1.7
ATM-203ENST00000452508 NOM1Q5C9Z4 860 aaKnown RBP4.41□□□□□ -1.7
ATM-203ENST00000452508 ZNF330Q9Y3S2 320 aaPredicted RBP4.41□□□□□ -1.7
ATM-203ENST00000452508 TOM1O60784 492 aa4.4□□□□□ -1.7
ATM-203ENST00000452508 TUBB4BP68371 445 aa4.4□□□□□ -1.7
ATM-203ENST00000452508 ZNF526Q8TF50 670 aaPredicted RBP4.4□□□□□ -1.7
ATM-203ENST00000452508 NGLY1Q96IV0 654 aa4.4□□□□□ -1.7
ATM-203ENST00000452508 ZNF652Q9Y2D9 606 aa4.4□□□□□ -1.7
ATM-203ENST00000452508 CHD1O14646 1710 aa4.4□□□□□ -1.7
ATM-203ENST00000452508 SH3BGRP55822 239 aaPredicted RBP4.4□□□□□ -1.7
ATM-203ENST00000452508 WWC2Q6AWC2 1192 aa4.4□□□□□ -1.7
ATM-203ENST00000452508 TMEM132EQ6IEE7 984 aa4.4□□□□□ -1.7
ATM-203ENST00000452508 GBP4Q96PP9 640 aa4.4□□□□□ -1.7
ATM-203ENST00000452508 NAIPQ13075 1403 aa4.4□□□□□ -1.7
ATM-203ENST00000452508 MAGI3Q5TCQ9 1506 aa4.4□□□□□ -1.71
ATM-203ENST00000452508 ST20-MTHFSA0A0A6YYL1 179 aa4.4□□□□□ -1.71
ATM-203ENST00000452508 SLC3A2P08195 630 aaKnown RBP4.4□□□□□ -1.71
ATM-203ENST00000452508 GPATCH8Q9UKJ3 1502 aaKnown RBP4.4□□□□□ -1.71
ATM-203ENST00000452508 HSP90AB4PQ58FF6 505 aa4.4□□□□□ -1.71
ATM-203ENST00000452508 RBM19Q9Y4C8 960 aaKnown RBP4.4□□□□□ -1.71
ATM-203ENST00000452508 ABCC10Q5T3U5 1492 aa4.4□□□□□ -1.71
ATM-203ENST00000452508 PPP1R1BQ9UD71 204 aaPredicted RBP4.4□□□□□ -1.71
ATM-203ENST00000452508 SHROOM2Q13796 1616 aa4.4□□□□□ -1.71
ATM-203ENST00000452508 SYCP2Q9BX26 1530 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 SPG7Q9UQ90 795 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 GNL3LQ9NVN8 582 aaKnown RBP4.39□□□□□ -1.71
ATM-203ENST00000452508 PES1O00541 588 aaKnown RBP4.39□□□□□ -1.71
ATM-203ENST00000452508 CDR1P51861 262 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 TXLNBQ8N3L3 684 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 NEO1Q92859 1461 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.39□□□□□ -1.71
ATM-203ENST00000452508 TPM4P67936 248 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 CNPY4Q8N129 248 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 SAMD9Q5K651 1589 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 CCP110O43303 1012 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 PLCH2O75038 1416 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 PODXL2Q9NZ53 605 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 CHMP3Q9Y3E7 222 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 DHX29Q7Z478 1369 aaKnown RBP4.39□□□□□ -1.71
ATM-203ENST00000452508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.39□□□□□ -1.712e-7■■■■□ 19.4
ATM-203ENST00000452508 KCNH5Q8NCM2 988 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 MINK1Q8N4C8 1332 aaPredicted RBP4.39□□□□□ -1.71
ATM-203ENST00000452508 USP47Q96K76 1375 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 HMGN5P82970 282 aaKnown RBP4.39□□□□□ -1.71
ATM-203ENST00000452508 PNISRQ8TF01 805 aaKnown RBP4.39□□□□□ -1.71
ATM-203ENST00000452508 KIAA1107Q9UPP5 1409 aa4.39□□□□□ -1.71
ATM-203ENST00000452508 NKTRP30414 1462 aaKnown RBP4.38□□□□□ -1.71
ATM-203ENST00000452508 DDX11L8A8MPP1 907 aa4.38□□□□□ -1.71
ATM-203ENST00000452508 ACBD3Q9H3P7 528 aa4.38□□□□□ -1.71
ATM-203ENST00000452508 MSNP26038 577 aaKnown RBP4.38□□□□□ -1.71
ATM-203ENST00000452508 CEP89Q96ST8 783 aa4.38□□□□□ -1.71
ATM-203ENST00000452508 KIF7Q2M1P5 1343 aa4.38□□□□□ -1.71
ATM-203ENST00000452508 CENPJQ9HC77 1338 aaPredicted RBP4.38□□□□□ -1.71
ATM-203ENST00000452508 TPM2P07951 284 aa4.38□□□□□ -1.71
ATM-203ENST00000452508 CCDC43Q96MW1 224 aaKnown RBP4.38□□□□□ -1.71
ATM-203ENST00000452508 CFAP70Q5T0N1 1121 aa4.38□□□□□ -1.71
ATM-203ENST00000452508 CADPS2Q86UW7 1296 aa4.38□□□□□ -1.71
ATM-203ENST00000452508 TRAPPC8Q9Y2L5 1435 aa4.38□□□□□ -1.71
ATM-203ENST00000452508 ABCA8O94911 1581 aa4.38□□□□□ -1.71
ATM-203ENST00000452508 GCC2Q8IWJ2 1684 aa4.38□□□□□ -1.71
ATM-203ENST00000452508 TXNDC2Q86VQ3 553 aa4.38□□□□□ -1.71
ATM-203ENST00000452508 TCERG1O14776 1098 aaKnown RBP4.38□□□□□ -1.71
ATM-203ENST00000452508 USP8P40818 1118 aa4.38□□□□□ -1.71
ATM-203ENST00000452508 CPLX2Q6PUV4 134 aaKnown RBP4.38□□□□□ -1.71
ATM-203ENST00000452508 SYNE3Q6ZMZ3 975 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 CREBRFQ8IUR6 639 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 PDCL2Q8N4E4 241 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 U2AF1L5P0DN76 240 aaPredicted RBP4.37□□□□□ -1.71
ATM-203ENST00000452508 FAM193AP78312 1265 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 U2AF1Q01081 240 aaKnown RBP eCLIP4.37□□□□□ -1.715e-6■□□□□ 11.2
ATM-203ENST00000452508 C16orf71Q8IYS4 520 aaPredicted RBP4.37□□□□□ -1.71
ATM-203ENST00000452508 MAGI2Q86UL8 1455 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 ERCC6L2Q5T890 1561 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 ZFYVE16Q7Z3T8 1539 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 RWDD1Q9H446 243 aaPredicted RBP4.37□□□□□ -1.71
ATM-203ENST00000452508 CCDC66A2RUB6 948 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 TUBB4AP04350 444 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 SYTL4Q96C24 671 aaPredicted RBP4.37□□□□□ -1.71
ATM-203ENST00000452508 NBPF8Q3BBV2 869 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 NBPF14Q5TI25 921 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 TRPM2O94759 1503 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 A0A087WZG4 1122 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 NLRP13Q86W25 1043 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 PMFBP1Q8TBY8 1022 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 ZNF287Q9HBT7 754 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 PPP4R2Q9NY27 417 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 CWC15Q9P013 229 aaKnown RBP4.37□□□□□ -1.71
ATM-203ENST00000452508 RTEL1-TNFRSF6BF6WH68 1400 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 TCOF1Q13428 1488 aaKnown RBP4.37□□□□□ -1.71
ATM-203ENST00000452508 PPP4R3BQ5MIZ7 849 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 CCDC70Q6NSX1 233 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 CNKSR2Q8WXI2 1034 aa4.37□□□□□ -1.71
ATM-203ENST00000452508 MPHOSPH6Q99547 160 aaKnown RBP4.37□□□□□ -1.71
ATM-203ENST00000452508 HOOK1Q9UJC3 728 aaKnown RBP4.37□□□□□ -1.71
ATM-203ENST00000452508 RDXP35241 583 aaKnown RBP4.37□□□□□ -1.71
ATM-203ENST00000452508 NBPF1Q3BBV0 1214 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms