RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 FMN2Q9NZ56 1722 aa20.74■□□□□ 0.91
TRAPPC12-211ENST00000452495 TRAK1Q9UPV9 953 aa20.74■□□□□ 0.91
TRAPPC12-211ENST00000452495 PLEKHH1Q9ULM0 1364 aa20.72■□□□□ 0.91
TRAPPC12-211ENST00000452495 CARD11Q9BXL7 1154 aa20.71■□□□□ 0.91
TRAPPC12-211ENST00000452495 C14orf37Q86TY3 774 aa20.7■□□□□ 0.9
TRAPPC12-211ENST00000452495 PRAM1Q96QH2 718 aa20.7■□□□□ 0.9
TRAPPC12-211ENST00000452495 RBM33Q96EV2 1170 aaKnown RBP20.69■□□□□ 0.9
TRAPPC12-211ENST00000452495 POGKQ9P215 609 aa20.69■□□□□ 0.9
TRAPPC12-211ENST00000452495 WAPLQ7Z5K2 1190 aa20.68■□□□□ 0.9
TRAPPC12-211ENST00000452495 C19orf44Q9H6X5 657 aa20.68■□□□□ 0.9
TRAPPC12-211ENST00000452495 ITSN1Q15811 1721 aa20.67■□□□□ 0.9
TRAPPC12-211ENST00000452495 CENPJQ9HC77 1338 aaPredicted RBP20.67■□□□□ 0.9
TRAPPC12-211ENST00000452495 SBNO2Q9Y2G9 1366 aa20.66■□□□□ 0.9
TRAPPC12-211ENST00000452495 USP47Q96K76 1375 aa20.65■□□□□ 0.9
TRAPPC12-211ENST00000452495 RGPD8O14715 1765 aaPredicted RBP20.64■□□□□ 0.9
TRAPPC12-211ENST00000452495 CADPS2Q86UW7 1296 aa20.64■□□□□ 0.89
TRAPPC12-211ENST00000452495 ROBO1Q9Y6N7 1651 aa20.63■□□□□ 0.89
TRAPPC12-211ENST00000452495 TULP4Q9NRJ4 1543 aa20.63■□□□□ 0.89
TRAPPC12-211ENST00000452495 MST1RQ04912 1400 aa20.62■□□□□ 0.89
TRAPPC12-211ENST00000452495 TOPAZ1Q8N9V7 1692 aa20.62■□□□□ 0.89
TRAPPC12-211ENST00000452495 TOM1O60784 492 aa20.62■□□□□ 0.89
TRAPPC12-211ENST00000452495 ATF3P18847 181 aa20.62■□□□□ 0.89
TRAPPC12-211ENST00000452495 USP32Q8NFA0 1604 aa20.62■□□□□ 0.89
TRAPPC12-211ENST00000452495 KIF1AQ12756 1690 aa20.61■□□□□ 0.89
TRAPPC12-211ENST00000452495 SAFB2Q14151 953 aaKnown RBP eCLIP20.61■□□□□ 0.89
TRAPPC12-211ENST00000452495 ANKARQ7Z5J8 1434 aa20.6■□□□□ 0.89
TRAPPC12-211ENST00000452495 MINK1Q8N4C8 1332 aaPredicted RBP20.59■□□□□ 0.89
TRAPPC12-211ENST00000452495 ZEB1P37275 1124 aaPredicted RBP20.59■□□□□ 0.89
TRAPPC12-211ENST00000452495 UBAP1LF5GYI3 381 aa20.58■□□□□ 0.89
TRAPPC12-211ENST00000452495 C1orf167Q5SNV9 1468 aa20.57■□□□□ 0.88
TRAPPC12-211ENST00000452495 NHSL1Q5SYE7 1610 aa20.56■□□□□ 0.88
TRAPPC12-211ENST00000452495 POTEDQ86YR6 584 aa20.56■□□□□ 0.88
TRAPPC12-211ENST00000452495 ATP7BP35670 1465 aa20.55■□□□□ 0.88
TRAPPC12-211ENST00000452495 WASLO00401 505 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC12-211ENST00000452495 HIRIP3Q9BW71 556 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC12-211ENST00000452495 SLC24A1O60721 1099 aa20.53■□□□□ 0.88
TRAPPC12-211ENST00000452495 SLAIN2Q9P270 581 aa20.53■□□□□ 0.88
TRAPPC12-211ENST00000452495 AHDC1Q5TGY3 1603 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC12-211ENST00000452495 EVC2Q86UK5 1308 aa20.53■□□□□ 0.88
TRAPPC12-211ENST00000452495 ST20-MTHFSA0A0A6YYL1 179 aa20.52■□□□□ 0.88
TRAPPC12-211ENST00000452495 EIF4G2P78344 907 aaKnown RBP eCLIP20.52■□□□□ 0.88
TRAPPC12-211ENST00000452495 FBXO41Q8TF61 875 aa20.52■□□□□ 0.88
TRAPPC12-211ENST00000452495 PHLPP1O60346 1717 aa20.51■□□□□ 0.87
TRAPPC12-211ENST00000452495 TESK2Q96S53 571 aa20.5■□□□□ 0.87
TRAPPC12-211ENST00000452495 CDK19Q9BWU1 502 aa20.48■□□□□ 0.87
TRAPPC12-211ENST00000452495 PIP4K2BP78356 416 aa20.47■□□□□ 0.87
TRAPPC12-211ENST00000452495 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
TRAPPC12-211ENST00000452495 ATAD2Q6PL18 1390 aa20.46■□□□□ 0.87
TRAPPC12-211ENST00000452495 AKAP12Q02952 1782 aa20.46■□□□□ 0.87
TRAPPC12-211ENST00000452495 HSPA5P11021 654 aaKnown RBP20.46■□□□□ 0.87
TRAPPC12-211ENST00000452495 PRR36Q9H6K5 1346 aa20.46■□□□□ 0.87
TRAPPC12-211ENST00000452495 COL16A1Q07092 1604 aaPredicted RBP20.45■□□□□ 0.87
TRAPPC12-211ENST00000452495 SRPK2P78362 688 aaKnown RBP20.45■□□□□ 0.86
TRAPPC12-211ENST00000452495 BRINP3Q76B58 766 aa20.45■□□□□ 0.86
TRAPPC12-211ENST00000452495 MYOM1P52179 1685 aa20.45■□□□□ 0.86
TRAPPC12-211ENST00000452495 NUTM2FA1L443 756 aa20.44■□□□□ 0.86
TRAPPC12-211ENST00000452495 TMF1P82094 1093 aa20.43■□□□□ 0.86
TRAPPC12-211ENST00000452495 PUS7Q96PZ0 661 aaKnown RBP20.43■□□□□ 0.86
TRAPPC12-211ENST00000452495 DISP3Q9P2K9 1392 aa20.43■□□□□ 0.86
TRAPPC12-211ENST00000452495 MON2Q7Z3U7 1717 aa20.42■□□□□ 0.86
TRAPPC12-211ENST00000452495 ESCO1Q5FWF5 840 aa20.42■□□□□ 0.86
TRAPPC12-211ENST00000452495 NUDT16Q96DE0 195 aaKnown RBP20.42■□□□□ 0.86
TRAPPC12-211ENST00000452495 PPIP5K1Q6PFW1 1433 aa20.42■□□□□ 0.86
TRAPPC12-211ENST00000452495 TRPM3Q9HCF6 1732 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC12-211ENST00000452495 ORAI2Q96SN7 254 aa20.41■□□□□ 0.86
TRAPPC12-211ENST00000452495 CABP2Q9NPB3 220 aa20.41■□□□□ 0.86
TRAPPC12-211ENST00000452495 CDCA8Q53HL2 280 aa20.4■□□□□ 0.86
TRAPPC12-211ENST00000452495 PHF8Q9UPP1 1060 aa20.4■□□□□ 0.86
TRAPPC12-211ENST00000452495 NINLQ9Y2I6 1382 aa20.4■□□□□ 0.86
TRAPPC12-211ENST00000452495 CCDC61Q9Y6R9 512 aa20.4■□□□□ 0.86
TRAPPC12-211ENST00000452495 PXDNQ92626 1479 aa20.39■□□□□ 0.85
TRAPPC12-211ENST00000452495 SHPRHQ149N8 1683 aa20.38■□□□□ 0.85
TRAPPC12-211ENST00000452495 NRKQ7Z2Y5 1582 aa20.38■□□□□ 0.85
TRAPPC12-211ENST00000452495 NPHP3Q7Z494 1330 aa20.38■□□□□ 0.85
TRAPPC12-211ENST00000452495 POLR3AO14802 1390 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC12-211ENST00000452495 ALS2Q96Q42 1657 aa20.35■□□□□ 0.85
TRAPPC12-211ENST00000452495 PLEKHG3A1L390 1219 aa20.35■□□□□ 0.85
TRAPPC12-211ENST00000452495 COL22A1Q8NFW1 1626 aaPredicted RBP20.34■□□□□ 0.85
TRAPPC12-211ENST00000452495 SOS2Q07890 1332 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC12-211ENST00000452495 PMFBP1Q8TBY8 1022 aa20.32■□□□□ 0.84
TRAPPC12-211ENST00000452495 CD163L1Q9NR16 1453 aa20.31■□□□□ 0.84
TRAPPC12-211ENST00000452495 FOXO3O43524 673 aa20.31■□□□□ 0.84
TRAPPC12-211ENST00000452495 BRD4O60885 1362 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC12-211ENST00000452495 USP6P35125 1406 aa20.3■□□□□ 0.84
TRAPPC12-211ENST00000452495 CPSF1Q10570 1443 aaKnown RBP20.3■□□□□ 0.84
TRAPPC12-211ENST00000452495 HSPA1LP34931 641 aa20.3■□□□□ 0.84
TRAPPC12-211ENST00000452495 NGDNQ8NEJ9 315 aaKnown RBP20.3■□□□□ 0.84
TRAPPC12-211ENST00000452495 CABP1Q9NZU7 370 aa20.3■□□□□ 0.84
TRAPPC12-211ENST00000452495 SBNO1A3KN83 1393 aa20.3■□□□□ 0.84
TRAPPC12-211ENST00000452495 ABCA3Q99758 1704 aa20.3■□□□□ 0.84
TRAPPC12-211ENST00000452495 ACEP12821 1306 aa20.29■□□□□ 0.84
TRAPPC12-211ENST00000452495 TNS3Q68CZ2 1445 aa20.29■□□□□ 0.84
TRAPPC12-211ENST00000452495 DDX17Q92841 729 aaKnown RBP20.28■□□□□ 0.84
TRAPPC12-211ENST00000452495 USP54Q70EL1 1684 aa20.28■□□□□ 0.84
TRAPPC12-211ENST00000452495 CRYBG1Q9Y4K1 1723 aa20.27■□□□□ 0.84
TRAPPC12-211ENST00000452495 KIF20BQ96Q89 1820 aa20.27■□□□□ 0.84
TRAPPC12-211ENST00000452495 MED1Q15648 1581 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC12-211ENST00000452495 ANKRD36BQ8N2N9 1353 aa20.27■□□□□ 0.84
TRAPPC12-211ENST00000452495 PSME1Q06323 249 aa20.27■□□□□ 0.84
TRAPPC12-211ENST00000452495 ILDR1Q86SU0 546 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms